KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:24 2014 Check: 00 .. Name: ENSTTRP00000011881/1-543 Len: 543 Check: 46 Weight: 1.00 Name: ENSBTAP00000024159/1-535 Len: 543 Check: 4551 Weight: 1.00 Name: BACU019957/1-543 Len: 543 Check: 253 Weight: 1.00 Name: bmy_01088T0/1-507 Len: 543 Check: 1140 Weight: 1.00 Name: ENSP00000233557/1-535 Len: 543 Check: 4113 Weight: 1.00 // 1 50 ENSTTRP00000011881/1-543 MSEGESQTVL SSGSDPKVES SSSAPGLTSV SPPVTSTTSA ASPEEEEESE ENSBTAP00000024159/1-535 MSEGEPQTVL SSGSDPKVES SSSTPGLTSV SPPVTSTTSA ASPEEEEESE BACU019957/1-543 MSEGESQTVL SSGSDPKVES SSSAPGLTSV SPPVTSTTSA ASPEEEEESE bmy_01088T0/1-507 MSEGESQTVL SSGSDPKVES SSSAPGLTSV SPPVTSTTSA ASPEEEEESE ENSP00000233557/1-535 MSEGESQTVL SSGSDPKVES SSSAPGLTSV SPPVTSTTSA ASPEEEEESE 51 100 ENSTTRP00000011881/1-543 DESEILEESP CGRWQKRREE VNQRNVPGID SAYLAMDTEE GVEVVWNEVQ ENSBTAP00000024159/1-535 DESEILEESP CGRWQKRREE VNQRNVPGID SAYLAMDTEE GVEVVWNEVQ BACU019957/1-543 DESEILEESP CGRWQKRREE VNQRNVPGID SAYLAMDTEE GVEVVWNEVQ bmy_01088T0/1-507 DESEILEESP CGRWQKRREE VNQRNVPGID SAYLAMDTEE GVEVVWNEVQ ENSP00000233557/1-535 DESEILEESP CGRWQKRREE VNQRNVPGID SAYLAMDTEE GVEVVWNEVQ 101 150 ENSTTRP00000011881/1-543 FSERKNYKLQ EEKVRAVFDN LIQLEHLNIV KFHKYWADIK ENKARVIFIT ENSBTAP00000024159/1-535 FSERKNYKLQ EEKVRAVFDN LIQLEHLNIV KFHKYWADIK ENKARVIFIT BACU019957/1-543 FSERKNYKLQ EEKVRAVFDN LIQLEHLNIV KFHKYWADVK ENKARVIFIT bmy_01088T0/1-507 FSERKNYKLQ EEKVRAVFDN LIQLEHLNIV KFHKYWADIK ENKARVIFIT ENSP00000233557/1-535 FSERKNYKLQ EEKVRAVFDN LIQLEHLNIV KFHKYWADIK ENKARVIFIT 151 200 ENSTTRP00000011881/1-543 EYMSSGSLKQ FLKKTKKNHK TMNEKAWKRW CTQILSALSY LHSCDPPIIH ENSBTAP00000024159/1-535 EYMSSGSLKQ FLKKTKKNHK TMNEKAWKRW CTQILSALSY LHSCDPPIIH BACU019957/1-543 EYMSSGSLKQ FLKKTKKNHK TMNEKAWKRW CTQILSALSY LHSCDPPIIH bmy_01088T0/1-507 EYMSSGSLKQ FLKKTKKNHK TMNEKAWKRW CTQILSALSY LHSCDPPIIH ENSP00000233557/1-535 EYMSSGSLKQ FLKKTKKNHK TMNEKAWKRW CTQILSALSY LHSCDPPIIH 201 250 ENSTTRP00000011881/1-543 GNLTCDTIFI QHNGLIKIGS VFHRIFANVA RDTINNHVKT CREEQKNLHF ENSBTAP00000024159/1-535 GNLTCDTIFI QHNGLIKIGS --------VA PDTINNHVKT CREEQKNLHF BACU019957/1-543 GNLTCDTIFI QHNGLIKIGS VFHRIFANVA PDTINNHVKT CREEQKNLHF bmy_01088T0/1-507 GNLTCDTIFI QHNGLIKIGS ---------- ---------- ---------- ENSP00000233557/1-535 GNLTCDTIFI QHNGLIKIGS --------VA PDTINNHVKT CREEQKNLHF 251 300 ENSTTRP00000011881/1-543 FAPEYGEVTN VTTAVDIYSF GMCALEMAVL EIQGNGESSY VPQEAISSAI ENSBTAP00000024159/1-535 FAPEYGEVTN VTTAVDIYSF GMCALEMAVL EIQGNGESSY VPQEAISSAI BACU019957/1-543 FAPEYGEVTN VTTAVDIYSF GMCALEMAVL EIQGNGESSY VPQEAISSAI bmy_01088T0/1-507 ------EVTN VTTAVDIYSF GMCALEMAVL EIQGNGESSY VPQEAISSAI ENSP00000233557/1-535 FAPEYGEVTN VTTAVDIYSF GMCALEMAVL EIQGNGESSY VPQEAISSAI 301 350 ENSTTRP00000011881/1-543 QLLEDPLQRE FIQKCLQSEP ARRPTARELL FHPALFEVPS LKLLAAHCIV ENSBTAP00000024159/1-535 QLLEDPLQRE FIQKCLQSEP ARRPTARELL FHPALFEVPS LKLLAAHCIV BACU019957/1-543 QLLEDPLQRE FIQKCLQSEP ARRPTARELL FHPALFEVPS LKLLAAHCIV bmy_01088T0/1-507 QLLEDPLQRE FIQKCLQSEP ARRPTARELL FHPALFEVPS LKLLAAHCIV ENSP00000233557/1-535 QLLEDPLQRE FIQKCLQSEP ARRPTARELL FHPALFEVPS LKLLAAHCIV 351 400 ENSTTRP00000011881/1-543 GHQHMIPENA LEEITKNMDT SAVLAEIPAG PGREPVQTLY SQSPALELDK ENSBTAP00000024159/1-535 GHQHMIPENA LEEITKNMDT SAVLAEIPAG PGREPVQTLY SQSPALELDK BACU019957/1-543 GHQHMIPENA LEEITKNMDT SAVLAEIPAG PGREPVQTLY SQSPALELDK bmy_01088T0/1-507 GHQHMIPENA LEEITKNMDT SAVLAEIPAG PGREPVQTLY SQSPALELDK ENSP00000233557/1-535 GHQHMIPENA LEEITKNMDT SAVLAEIPAG PGREPVQTLY SQSPALELDK 401 450 ENSTTRP00000011881/1-543 FLEDVRNGIY PLTAFGLPRP QQPQQEEVTS PVVPPSVKTP TPEPAEVETR ENSBTAP00000024159/1-535 FLEDVRNGIY PLTAFGLPRP QQPQQEEVTS PVVPPSVKTP TPEPAEVETR BACU019957/1-543 FLEDVRNGIY PLTAFGLPRP QQPQQEEVTS PVVPPSVKTP TPEPAEVETR bmy_01088T0/1-507 FLEDVRNGIY PLTAFGLPRP QQPQQEEVTS PVVPPSVKTP TPEPAEVETR ENSP00000233557/1-535 FLEDVRNGIY PLTAFGLPRP QQPQQEEVTS PVVPPSVKTP TPEPAEVETR 451 500 ENSTTRP00000011881/1-543 KVVLMQCNIE SVEEGVKHHL TLLLKLEDKL NRHLSCDLMP NENIPELAAE ENSBTAP00000024159/1-535 KVVLMQCNIE SVEEGVKHHL TLLLKLEDKL NRHLSCDLMP NENIPELAAE BACU019957/1-543 KVVLMQCNIE SVEEGVKHHL TLLLKLEDKL NRHLSCDLMP NENIPELAAE bmy_01088T0/1-507 KVVLMQCNIE SVEEGVKHHL TLLLKLEDKL NRHLSCDLMP NENIPELAAE ENSP00000233557/1-535 KVVLMQCNIE SVEEGVKHHL TLLLKLEDKL NRHLSCDLMP NENIPELAAE 501 550 ENSTTRP00000011881/1-543 LVQLGFISEA DQTRLTSLLE ETLSKFNFAR NSTLNSAAVT VSS ENSBTAP00000024159/1-535 LVQLGFISEA DQSRLTSLLE ETLNKFNFAR NSTLNSAAVT VSS BACU019957/1-543 LVQLGFISEA DQSRLTSLLE ETLNKFNFAR NSTLNSAAVT VSS bmy_01088T0/1-507 LVQLGFISEA DQSRLTSLLE ETLNKFNFAR NSTLNSAAVT VSS ENSP00000233557/1-535 LVQLGFISEA DQSRLTSLLE ETLNKFNFAR NSTLNSAAVT VSS