KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:36 2014 Check: 00 .. Name: ENSP00000358677/1-607 Len: 612 Check: 7977 Weight: 1.00 Name: ENSBTAP00000024171/1-612 Len: 612 Check: 2897 Weight: 1.00 Name: ENSTTRP00000005395/1-612 Len: 612 Check: 2447 Weight: 1.00 Name: bmy_21797T0/1-578 Len: 612 Check: 3960 Weight: 1.00 Name: BACU016906/1-604 Len: 612 Check: 596 Weight: 1.00 // 1 50 ENSP00000358677/1-607 MAEKRRGSPC SMLSLKAHAF SVEALIGAEK QQQLQKKRRK LGAEEAAGAV ENSBTAP00000024171/1-612 MAEKRRGSPC SMLSLKAHAF SVEALIGAEK QQQLQKKRRK LGAEEAAGAL ENSTTRP00000005395/1-612 MAEKRRGSPC SMLSLKAHAF SVEALIGAEK QQQLQKKRRK LGAEEAAGAL bmy_21797T0/1-578 MAEKRRGSPC SMLSLKAHAF SVEALIGAEK QQQLQKKRRK LGAEEAAGAL BACU016906/1-604 MAEKRRGSPC SMLSLKAHAF SVEALIGAEK QQQLQKKRRK LGAEEAAGAL 51 100 ENSP00000358677/1-607 DDGGCSRGGG AGEKGSSEGD EGAALPPPAG ATSGPARSGA DLER-----G ENSBTAP00000024171/1-612 DDGGCSRGGG AGEKGSSEGD EGSALQPPAG AASGPTRSCA DLERSCGSRG ENSTTRP00000005395/1-612 DDGGCSRGSA AGEKGSSEGD EGTALSPPAG AASGPIRSCA DLERSCGSRG bmy_21797T0/1-578 DDGGCSRGGG AGEKGSSEGD EGTALPPPAG AASGPIRSCA DLERSCGSRG BACU016906/1-604 DDGGCSRGGG AGEKGSSEGD EGTALSPPAG AASGPIRSCA DLERS----- 101 150 ENSP00000358677/1-607 AAGGCEDGFQ QGASPLASPG GSPKGSPARS LARPGTPLPS PQAPRVDLQG ENSBTAP00000024171/1-612 SAGGCEDGFL QGASPLASPG GSPKGSPAPT LARPGTPLPS PQAPRVDLQG ENSTTRP00000005395/1-612 AAGGCEDGFL QGASPLASPG DSPKGSPVPA LARPVTPLPS PQAPRVDLQG bmy_21797T0/1-578 AAGGCEDGFL QGASPLASPG DSPKGSPVPA LARPGTPLPS PQAPRVDLQG BACU016906/1-604 ---GCEDGFL QGASPLASPG DSPKGSPVPT LARPGTPLPS PQAPRVDLQG 151 200 ENSP00000358677/1-607 AELWKRFHEI GTEMIITKAG RRMFPAMRVK ISGLDPHQQY YIAMDIVPVD ENSBTAP00000024171/1-612 AELWKRFHEI GTEMIITKAG RRMFPAMRVK ISGLDPHQQY YIAMDIVPVD ENSTTRP00000005395/1-612 AELWKRFHEI GTEMIITKAG RRMFPAMRVK ISGLDPHQQY YIAMDIVPVD bmy_21797T0/1-578 AELWKRFHEI GTEMIITKAG RRMFPAMRVK ISGLDPHQQY YIAMDIVPVD BACU016906/1-604 AELWKRFHEI GTEMIITKAG RRMFPAMRVK ISGLDPHQQY YIAMDIVPVD 201 250 ENSP00000358677/1-607 NKRYRYVYHS SKWMVAGNAD SPVPPRVYIH PDSPASGETW MRQVISFDKL ENSBTAP00000024171/1-612 NKRYRYVYHS SKWMVAGNAD SPVPPRVYIH PDSPASGETW MRQVISFDKL ENSTTRP00000005395/1-612 NKRYRYVYHS SKWMVAGNAD SPVPPRVYIH PDSPASGETW MRQVISFDKL bmy_21797T0/1-578 NKRYRYVYHS SKWMVAGNAD SPVPPRVYIH PDSPASGETW MRQVISFDKL BACU016906/1-604 NKRYRYVYHS SKWMVAGNAD SPVPPRVYIH PDSPASGETW MRQVISFDKL 251 300 ENSP00000358677/1-607 KLTNNELDDQ GHIILHSMHK YQPRVHVIRK DCGDDLSPIK PVPSGEGVKA ENSBTAP00000024171/1-612 KLTNNELDDQ GHIILHSMHK YQPRVHIIRK DCGDDLSPIK PVPSGEGVKA ENSTTRP00000005395/1-612 KLTNNELDDQ GHIILHSMHK YQPRVHVIRK DCGDDLSPIK PVPCGEGVKA bmy_21797T0/1-578 KLTNNELDDQ GHIILHSMHK YQPRVHVIRK DCGDDLSPIK PVPSGEGVKA BACU016906/1-604 KLTNNELDDQ GHIILHSMHK YQPRVHVIRK DCGDDLSPIK PVPSGEGVKA 301 350 ENSP00000358677/1-607 FSFPETVFTT VTAYQNQQIT RLKIDRNPFA KGFRDSGRNR MGLEALVESY ENSBTAP00000024171/1-612 FSFPETVFTT VTAYQNQQIT RLKIDRNPFA KGFRDSGRNR MGLEALVESY ENSTTRP00000005395/1-612 FSFPETVFTT VTAYQNQQIT RLKIDRNPFA KGFRDSGRNR MGLEALVESY bmy_21797T0/1-578 FSFPETVFTT VTAYQNQQIT RLKIDRNPFA KGFRDSGR-- ---------- BACU016906/1-604 FSFPETVFTT VTAYQNQQIT RLKIDRNPFA KGFRDSGRNR MGLEALVESY 351 400 ENSP00000358677/1-607 AFWRPSLRTL TFEDIPGIPK QGNASSSTLL QGTGNGVPAT HPHLLSGSSC ENSBTAP00000024171/1-612 AFWRPSLRTL TFEDIPGIPK QGNTGSSTLL QGSGNGVAAT HPHLLSGSPC ENSTTRP00000005395/1-612 AFWRPSLRTL TFEDIPGIPK QGNAGSSTLL QGSGNGVAAT HPHLLSGSPC bmy_21797T0/1-578 ---------- ---------- --NTGSSTLL QGSGNGVAAT HPHLLSGSPC BACU016906/1-604 AFWRPSLRTL TFEDIPGIPK QGNTGSSTLL QGSGNGVAAT HPHLLSGSPC 401 450 ENSP00000358677/1-607 SSPAFHLGPN TSQLCSLAPA DYSACARSGL TLNRYSTSLA ETYNRLTNQA ENSBTAP00000024171/1-612 SSPAFHLGPN TSQLCGLAPA DYSACARSGL TLNRYSTSLA ETYNRLTNQT ENSTTRP00000005395/1-612 SSPAFHLGPN TSQLCSLAPA DYSACARSSL TLNRYSTSLA ETYNRLTNQT bmy_21797T0/1-578 SSPAFHLGPN TSQLCSLAPA DYSACARSSL TLNRYSTSLA ETYNRLTNQT BACU016906/1-604 SSPAFHLGPN TSQLCSLAPA DYSACARSSL TLNRYSTSLA ETYNRLTNQT 451 500 ENSP00000358677/1-607 GETFAPPRTP SYVGVSSSTS VNMSMGGTDG DTFSCPQTSL SMQISGMSPQ ENSBTAP00000024171/1-612 GETFAPPRTP SYVGVSSSAS VNMSMGGTDG DTFSCPQTSL SMQISGMSPQ ENSTTRP00000005395/1-612 GETFAPPRTP SYVGVSGSAS VNMSMGGTDG DTFSCPQTSL SMQISGMSPQ bmy_21797T0/1-578 GETFAPPRTP SYVGVSGSAS VNMSMGGTDG DTFSCPQTSL SMQISGMSPQ BACU016906/1-604 GETFAPPRTP SYMGVSGSAS VNMSMGGTDG DTFSCPQTSL SMQISGMSPQ 501 550 ENSP00000358677/1-607 LQYIMPSPSS NAFATNQTHQ GSYNTFRLHS PCALYGYNFS TSPKLAASPE ENSBTAP00000024171/1-612 LQYIMPSPPS NAFAANQTHQ GSYNTFRLHS PCALYGYNFS TSPKLAASPE ENSTTRP00000005395/1-612 LQYIMPSPPS NAFAANQTHQ GSYNTFRLHS PCALYGYNFS TSPKLAASPE bmy_21797T0/1-578 LQYIMPSPPS NAFAANQTHQ GSYNTFRLHS PCALYGYNFS TSPKLAASPE BACU016906/1-604 LQYIMPSPPS NAFAANQTHQ GSYNTFRLHS PCALYGYNFS TSPKLAASPE 551 600 ENSP00000358677/1-607 KIVSSQGSFL GSSPSGTMTD RQMLPPVEGV HLLSSGGQQS FFDSRTLGSL ENSBTAP00000024171/1-612 KIVSSQGSFL GSSPSGTMTD RQMLPPVEGV HLLSSGGQQS FFDSRTLGSL ENSTTRP00000005395/1-612 KIVSSQGSFL GSSPSGTMTD RQMLPPVEGV HLLSSGGQQS FFDSRTLGSL bmy_21797T0/1-578 KIVSSQGSFL GSSPSGTMTD RQMLPPVEGV HLLSSGGQQS FFDSRTLGSL BACU016906/1-604 KIVSSQGSFL GSSPSGTMTD RQMLPPVEGV HLLSSGGQQS FFDSRTLGSL 601 650 ENSP00000358677/1-607 TLSSSQVSAH MV ENSBTAP00000024171/1-612 TLSSSQVSAH MV ENSTTRP00000005395/1-612 TLSSSQVSAH MV bmy_21797T0/1-578 TLSSSQVSAH MV BACU016906/1-604 TLSSSQVSAH MV