KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:22:37 2014 Check: 00 .. Name: ENSP00000330075/1-331 Len: 391 Check: 1129 Weight: 1.00 Name: ENSTTRP00000012471/1-245 Len: 391 Check: 1818 Weight: 1.00 Name: bmy_02221T0/1-374 Len: 391 Check: 3216 Weight: 1.00 Name: ENSBTAP00000024181/1-315 Len: 391 Check: 5511 Weight: 1.00 // 1 50 ENSP00000330075/1-331 ---------- ---------- ---------- --MAPQRRAA TKAPEGNGAA ENSTTRP00000012471/1-245 ---------- ---------- ---------- ---------- ---------- bmy_02221T0/1-374 SLAALVSRYL SRRSSRARGG SRVRPGSAAA WPMAPQRRGA PKAPEGSGAA ENSBTAP00000024181/1-315 ---------- ---------- ---------- --MAPQRRGA PKAPEGSGAA 51 100 ENSP00000330075/1-331 ERRNRSSTKK DRAPREVQRL WQRPWLRTAG LGAGFVLTAL LLWSSLGADD ENSTTRP00000012471/1-245 -------TRS VRAPRDV--- WKK-WLRVAV LGACTTFVAL LLWGSLGGDD bmy_02221T0/1-374 ERRRPSSTKS VRAPRDV--- WKK-WLRVAV LGACTTLVAL LLWGSLGGDD ENSBTAP00000024181/1-315 ERRRQSSTKS VRAPRDV--- RKR-WLRVVV LGSCTALAAC LFWGSLGGDD 101 150 ENSP00000330075/1-331 GVAEVLARRG EVVAGRFIEV PCSEDYDSHR RFEG------ ---------- ENSTTRP00000012471/1-245 SITEVLAHRS EVLPGRFIEV PCSEDYDSHR RFEG------ ---------- bmy_02221T0/1-374 SITEVLAHRS EVLPGRFIEV PCSEDYDSHR RFEGESWTAA GSSFVGVQRE ENSBTAP00000024181/1-315 GITEVLAHRS EILPGRFIEV PCSEDYDSHR RFEG------ ---------- 151 200 ENSP00000330075/1-331 ---------- -CTPRKCGRG VTDVVITREE AERIRSVAEK GLSLGGSDGG ENSTTRP00000012471/1-245 ---------- -CSPRKCGRG VSDAIITRDE ARRIRSIAEK GLSLGGSDGG bmy_02221T0/1-374 WRLILARLSP GCSPRKCGRG VSDAIITRDE ARRIRSIAEK GLSLGGSDGG ENSBTAP00000024181/1-315 ---------- -CSPRKCGRG ISDAVITRDE ARRIRSIAEK GLSLGGSDGG 201 250 ENSP00000330075/1-331 ASILDLHSGA LSVGKHFVNL YRYFGDKIQN IFSEEDFRLY REVRQKVQLT ENSTTRP00000012471/1-245 ASILDLHSGA LSVGKHFVNL YRYFGDKIQT IFSEEDFQLY RXXXXXXXXX bmy_02221T0/1-374 ASILDLHSGA LSVGKHFVNL YRYFGDKIQT IFSEEDFQLY RDLRQKVQLA ENSBTAP00000024181/1-315 ASILDLHSGA LSVGKHFVNL YRYFGDKIQT IFSEEDFQLY RDVRQKVQLA 251 300 ENSP00000330075/1-331 IAEAFGISAS SLHLTKPTFF SRINSTEART AHDEYWHAHV DKVTYGSFDY ENSTTRP00000012471/1-245 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVTYGSFDY bmy_02221T0/1-374 IAQAFGISAS LLHLTKPTFF SRINSTAART AHDEYWHAHV DKVTYGSFDY ENSBTAP00000024181/1-315 IAQAFGISAS SLHLTKPTFF SRINSTEART AHDEYWHAHV DKVTYGSFDY 301 350 ENSP00000330075/1-331 TSLLYLSNYL EDFGGGRFMF MEEGANKTVE PRAGCFCFRM MSC-GFQEVN ENSTTRP00000012471/1-245 TSLLYLSDYL DDFGGGRFVF MEEGANKTVE PRA------- ---------- bmy_02221T0/1-374 TSLLYLSDYL DDFGGGRFVF MEEGANKTVE PRAGRVSFFT SGSENLHRVE ENSBTAP00000024181/1-315 TSLLYLSDYL DDFGGGRFVF MEEGANKTVE PRAGRVSFFT SGSENLHRVE 351 400 ENSP00000330075/1-331 GPRASEAAGA KAGVRCPPGT HHPPERGETH AILEAESIAY C ENSTTRP00000012471/1-245 ---------- ---------- ---------- ---------- - bmy_02221T0/1-374 KVHWGTRYAI TIAFTC---- --DPDHGIAD PTFT------ - ENSBTAP00000024181/1-315 KVHWGTRYAI TIAFSC---- --NPDHGISD PTLT------ -