KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:39 2014 Check: 00 .. Name: ENSP00000309899/1-456 Len: 562 Check: 9671 Weight: 1.00 Name: ENSTTRP00000012474/1-456 Len: 562 Check: 7969 Weight: 1.00 Name: ENSBTAP00000024191/1-456 Len: 562 Check: 8495 Weight: 1.00 Name: bmy_02217T0/1-538 Len: 562 Check: 9302 Weight: 1.00 Name: BACU011651/1-420 Len: 562 Check: 9834 Weight: 1.00 // 1 50 ENSP00000309899/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012474/1-456 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024191/1-456 ---------- ---------- ---------- ---------- ---------- bmy_02217T0/1-538 QSPKAWSRTA LCALLLVQAC GSLAPGAFIG RAERRRVGPR RSKDNKGWRA BACU011651/1-420 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000309899/1-456 ---------- ---------- ----MKCEHC TRKECSKKTK TDDQENVSAD ENSTTRP00000012474/1-456 ---------- ---------- ----MKCEHC TRKXXXXXXX XXXXXXXXXX ENSBTAP00000024191/1-456 ---------- ---------- ----MKCEHC TRKECSKKTK TDDQENASVD bmy_02217T0/1-538 VGGGDRVSRC SAKAAHPDLP APLQMKCEHC TRKECSKKTK TDDQENASVD BACU011651/1-420 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000309899/1-456 APSPAQENGE ---------- ---------- ---------- --KGEFHKLA ENSTTRP00000012474/1-456 XXXXXXXXXX ---------- ---------- ---------- --KGEFHKLA ENSBTAP00000024191/1-456 VPSPAQENGE ---------- ---------- ---------- --KGEFHKLA bmy_02217T0/1-538 VPSPAHENGE ASRFFSFVSA WSKQLLLFFS SLGAHITRYI IAKGEFHKLA BACU011651/1-420 ---------- ---------- ---------- ---------- --KGEFHKLA 151 200 ENSP00000309899/1-456 DAKIFLSDCL ACDSCMTAEE GVQLSQQNAK DFFRVLNLNK KCDTSKHKVL ENSTTRP00000012474/1-456 DAKIFLSDCL ACDSCVSAEE GVQVSQQNAK DFFRVLNLNK KCDTSKHKVL ENSBTAP00000024191/1-456 DAKIFLSDCL ACDSCVSAEE GIQVSQQNAK DFFQVLNLNK KCDTSEHKVL bmy_02217T0/1-538 DAKIFLSDCL ACDSCVSAEE GVQVSQQNAK DFFRVLNLNK KCDTSKHKVL BACU011651/1-420 DAKIFLSDCL ACDSCVSAEE GVQVSQQNAK DFFRVLNLNK KCDTSKHKVL 201 250 ENSP00000309899/1-456 VVSVCPQSLP YFAAKFNLSV TDASRRLCGF LKSLGVHYVF DTTIAADFSI ENSTTRP00000012474/1-456 AVSVCPQSLP YFAAKFSLSV TDASRRLCGF LKSLGVHYVF DTTIAADFSI ENSBTAP00000024191/1-456 AVSLCPQSLP YFAAKFSLSV TDASRRLCGF LKSLGVHYVF DTTIAADFSI bmy_02217T0/1-538 AVSVCPQSLP YFAAKFSLSV TDASRRLCGF LKSLGVHYVF DTTIAADFSI BACU011651/1-420 AVSVCPQSLP YFAAKFSLSV TDASRRLCGF LKSLGVQYVF DTTIAADFSI 251 300 ENSP00000309899/1-456 LESQKEFVRR YRQHSEEERT LPMLTSACPG WVRYAERVLG RPITAHLCTA ENSTTRP00000012474/1-456 LESQKEFVRR FRQHNEEEPT LPMLTSACPG WVRYAERVLG HPVTPHLCTA ENSBTAP00000024191/1-456 LESQKEFVRR FRQHNEEEPA LPMLTSACPG WVRYAERVLG HPVTPHLCTA bmy_02217T0/1-538 LESQKEFVHR FRQHNEEEPT LPMLTSACPG WVRYAERVLG HPVTPHLCTA BACU011651/1-420 LESQKEFVRR FRQHSEEEPT LPMLTSACPG WVRYAERVLG HPVTPHLCTA 301 350 ENSP00000309899/1-456 KSPQQVMGSL VKDYFARQQN LSPEKIFHVI VAPCYDKKLE ALQESLPPAL ENSTTRP00000012474/1-456 KSPQQIMGSL VKDYFARRQN LSPDKIFHVI VAPCYDKKLE ALQEDVLTAS ENSBTAP00000024191/1-456 KSPQQIMGSL VKDYFARRQN LSPDKIFHVI VAPCYDKKLE ALQEDVLTAS bmy_02217T0/1-538 KSPQQIMGSL VKDYFARRQN LSPDKIFHVI VAPCYDKKLE ALQEDVLTAS BACU011651/1-420 KSPQQIMGSL VKDYFARRQN LSPDKIFHVI VAPCYDKKLE ALQEDVLTAS 351 400 ENSP00000309899/1-456 HGSRGADCVL TSGEIAQIME QGDLSVRDAA VDTLFGDLKE DKVTRHDGAS ENSTTRP00000012474/1-456 RGSRGTDCVL TSGEITQMME QSDLSVRDAA LDTLFGDMKE EEVRRHDGAS ENSBTAP00000024191/1-456 RGSRGTDCVL TSGEIAQMME QSDVSVREAA LDTLFGDVKE EELRRHDGAG bmy_02217T0/1-538 RGSRGTDCVL TSGEITQMME QSDLSVRDAA LDTLFGDVKE EEVRRHDGAS BACU011651/1-420 RGSRGTDCVL TSGEITQMME QSDLSVRDAA LDTLFGDVKE EEVRRHDGAS 401 450 ENSP00000309899/1-456 SDGHLAHIFR HAAKELFNED VEEVTYRALR NKDFQEVTLE KNGEVVLRFA ENSTTRP00000012474/1-456 SDGYLAHIFR HAAKELFNED VGEVTYRTLX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000024191/1-456 SDGYLAHIFR HAAKELFNED VGEVTYRALR NKDFQEVTLE KSGEVLLRFA bmy_02217T0/1-538 SDGYLAHIFR HAAKELFNED VGEVTYRALR NRDFQEVTLE KSGEVLLRFA BACU011651/1-420 SDGYLAHIFR HAAKELFNED VGEVTYRALR NRDFQEVTLE KSGEVLLRFA 451 500 ENSP00000309899/1-456 AAYGFRNIQN MILKLKKGKF PFHFVEVLAC AGGCLNGRGQ AQTPDGHADK ENSTTRP00000012474/1-456 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXCLNGRGQ AQTEDGCVDK ENSBTAP00000024191/1-456 AAYGFRNIQN VVLKLKKGKF PYHFVEVLAC AGGCLNGRGQ AQTADGRTDK bmy_02217T0/1-538 AAYGFRNIQN VVLKLKKGKF PYHFVE---- ---------- ---------- BACU011651/1-420 AAYGFRNIQN VVLKLKKGKF PYHFVEVLAC AGGCLNGRGQ AQTEDGCVDK 501 550 ENSP00000309899/1-456 ALLRQMEGIY ADIPVRRPES SAHVQELYQE WLEGINSPKA REVLHTTYQS ENSTTRP00000012474/1-456 ALLQKMKGIY TDIPVRLPET SSHVQELYQE WLDGTDSPRV QEALHTAYQG ENSBTAP00000024191/1-456 ALLQKMKGIY ADIPVQLPEA STHVQELYQE WLDGTDSPRV QEALHTAYQG bmy_02217T0/1-538 ALLQKMKGIY TDIPVRLPET SAHVQELYQE WLDGTDSPRV QEALHTAYQG BACU011651/1-420 ALLQKMKGIY TDIPVRLPET SAHVQELYQE WLDGTDSTRV QEALHTAYQG 551 600 ENSP00000309899/1-456 QERGTHSLDI KW ENSTTRP00000012474/1-456 PGHPANSRDI KW ENSBTAP00000024191/1-456 PGQPADSRDI KW bmy_02217T0/1-538 PGHPANSRDI KW BACU011651/1-420 PGHPANSRDI KW