KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:39 2014 Check: 00 .. Name: ENSP00000303158/1-538 Len: 720 Check: 6847 Weight: 1.00 Name: ENSBTAP00000024194/1-510 Len: 720 Check: 228 Weight: 1.00 Name: bmy_06584T0/1-664 Len: 720 Check: 8922 Weight: 1.00 Name: BACU002135/1-493 Len: 720 Check: 504 Weight: 1.00 Name: ENSTTRP00000006275/1-477 Len: 720 Check: 6507 Weight: 1.00 // 1 50 ENSP00000303158/1-538 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024194/1-510 ---------- ---------- ---------- ---------- ---------- bmy_06584T0/1-664 MRKSFKDPHT KPNNPETPRD QLRSRSRSRA ASQIVAMETA GRLRFSGPVE BACU002135/1-493 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006275/1-477 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000303158/1-538 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024194/1-510 ---------- ---------- ---------- ---------- ---------- bmy_06584T0/1-664 EFPEIVLTWA WASARAFSLE DRAPERPGER PHPCGGGERG RPEGSGQPPC BACU002135/1-493 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006275/1-477 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000303158/1-538 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024194/1-510 ---------- ---------- ---------- ---------- ---------- bmy_06584T0/1-664 QSSRVPECKM RRGKTLEKSH VGGWFPWGFL PSPDCLILWS VPDVCKDVDL BACU002135/1-493 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006275/1-477 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000303158/1-538 ---------- ---------- ---------M LQIGEDVDYL LIPREVRLAG ENSBTAP00000024194/1-510 ---------- ---------- ---------M LQIGEDVDYL LIPREVRLAG bmy_06584T0/1-664 DVLVEALKPV GTFKKIGKVF RREEDSTVGM LQIGEDVDYL LIPREVRLAG BACU002135/1-493 ---------- ---------- ---------M LQIGEDVDYL LIPREVRLAG ENSTTRP00000006275/1-477 ---------- ---------- ---------M LQIGEDVDYL LIPREVRLAG 201 250 ENSP00000303158/1-538 GVWRVISKPA TKEAEFRERL TQFLEEEGRT LEDVARIMEK STPHPPQPPK ENSBTAP00000024194/1-510 GVWRVISKPA TKEAEFRERL IQFLEEEGRT LEDVARIIEK STPHPPQPPR bmy_06584T0/1-664 GVWRVISKPA TKEAEFRERL IQFLEEEGRT LEDVARIIEK STPHPPQPPK BACU002135/1-493 GVWRVISKPA TKEAEFRERL IQFLEEEGRT LEDVARIIEK STPHPPQPPK ENSTTRP00000006275/1-477 GVWRVISKPA TKEAEFRERL IQFLEEEGRT LEDVARIIEK STPHPPQPPK 251 300 ENSP00000303158/1-538 KPKEPRVRRR VQQMVTPPPR LVVGTYDSSN ASDSEFSDFE TSR---DKSR ENSBTAP00000024194/1-510 KSKEPRVRRR VQQMVTPPPR LVVGTYDSSN ASDSEFSDFE TSRNKADKGR bmy_06584T0/1-664 KPKGPRM-RR VQQMVTPPPR LVVGTYDSSN ASDSEFSDFE TSRDKGDKGY BACU002135/1-493 KPKGPRM-RR VQQMVTPPPR LVVGTYDSSN ASDSEFSDFE TSRDKGDKGH ENSTTRP00000006275/1-477 KPKGPRM-RR VQQMVTPPPR LVVGTYDSSN ASDSEFSDFE TSRDKGDKGH 301 350 ENSP00000303158/1-538 QGPRRGKKVR KMPVSYLGSK FLGSDLESED DEELVEAFLR RQEKQPSAPP ENSBTAP00000024194/1-510 KGAGRGRKVR KMPVSYLGSK FLGSDLESED DEELVEAFLR RGEKKPSAPP bmy_06584T0/1-664 KGTGRGRKVR KMPVSYLGSK FLGSDLESED DEELVEAFLR RGEKKPSVPP BACU002135/1-493 KGTGRGRKVR KMPVSYLGSK FLGSDLESED DEELVEAFLR RGEKKPSVPP ENSTTRP00000006275/1-477 RGTGRGRKVR KMPVSYLGSK FLGSDLESED DEELVEAFLR RGEKKPSAPP 351 400 ENSP00000303158/1-538 ARRRVNLPVP MFEDNLGPQL SKADRWREYV SQVSWGKLKR RVKGWAPRAG ENSBTAP00000024194/1-510 PRRRVNLPVP MFDDSPGPQQ SKADRWRECV SQVSWGKLKR RVKGWAPKSS bmy_06584T0/1-664 ARRRVNLPVP MFEDNPVPQL SKADRWREYV SQVSWGKLKQ RVKGWAPRSS BACU002135/1-493 ARRRVNLPVP MFEDNPVPQL SKADRWREYV SQVSWGKLKR RVKGWAPRSS ENSTTRP00000006275/1-477 ARRRVNLPVP MFEDNPVPQL SKADRWREYV TQVSWGKLKR RVKGWAPRSS 401 450 ENSP00000303158/1-538 PGVGEARLAS TAVESAGVSS APEGTSPGDR LGNAGDVCVP QASPRRWRPK ENSBTAP00000024194/1-510 PGVGEARQAS TRVERDSA-S VPGSASLGCN VGNARDGRVP ETPPRRWRPQ bmy_06584T0/1-664 PGVGEAWQAS TRLERDGA-S VPRSASLGDN VGNAGDGQVP ESPPRRWRPK BACU002135/1-493 PGVGEAWQAS TRLERDGA-S VPRSASLGDN VGNAGDGPVP ESPPRRWRPK ENSTTRP00000006275/1-477 PGVGEAWQAS TRLERDGV-S VPRSASLGDN VGNAGDGQVP ESPPRRWRPK 451 500 ENSP00000303158/1-538 INWASFRRRR KEQTAPTGQG ADIEADQGGE AADSQREEAI ADQREGAAGN ENSBTAP00000024194/1-510 INWASFRRRR REETASRAQG GEAADEQRRE AIDNQRREAI DNQRGEAIDN bmy_06584T0/1-664 INWASFRRRR REEAAARVQG AEAIDEQRVE AVDNQR---- ----VEAVDN BACU002135/1-493 INWASFRRRR REEAAARVQG AEAIDEQRVE AVDNQRAGAI AVQGAEALDN ENSTTRP00000006275/1-477 INWASFWRRR REEAAARAQG AEAVDEQRVE AVDNQR---- ----VEAVGD 501 550 ENSP00000303158/1-538 QRAGAPADQG AEAADNQREE AADNQRAGAP AEEGAEAADN QREEAADNQR ENSBTAP00000024194/1-510 QRVEAVGNQI GEAV------ --DNQRAGPI AVQEAEAVDN QRADALAVQG bmy_06584T0/1-664 QRAGAIAVQG AEAL------ --DNQRAEAI AVQGAEALDN QRAEAPAVQ- BACU002135/1-493 QRAEAIAVQG AEAL------ --DNQRAEAP AVQRAEALDN QRAEASAVQ- ENSTTRP00000006275/1-477 QRAGAMAVQG AEAM------ ---------- AVQGAEAVGN QRAEDADNQR 551 600 ENSP00000303158/1-538 AEAPADQRSQ GTDNHREEAA DNQRAEAPAD QGSEVTDNQR EEAVHDQRER ENSBTAP00000024194/1-510 AEAIPVQGAE ALADPRAEAA EDLRPEAPVV QAAEAVPDG- ---------- bmy_06584T0/1-664 ---------- -----RVEDA DNQRAEAPDV QGAEAVSDG- ---------- BACU002135/1-493 ---------- -----RVEDA DNQRAEAPDV QGAEAVSDG- ---------- ENSTTRP00000006275/1-477 AEAPAVQ--- -----RVEDA DNQRAEAPDV QGAEAVSEE- ---------- 601 650 ENSP00000303158/1-538 APAVQGADNQ RAQARAGQRA EAAHNQRAGA PGIQEAEVSA AQGTTGTAPG ENSBTAP00000024194/1-510 ---------- -EEAGSVQRA EAVCNQRAET PAVQEAESSA AGRATGATAG bmy_06584T0/1-664 ---------- -AEAISDQRA EAANNQRAET PAVQGVESSA AGRAPGVTPG BACU002135/1-493 ---------- -AEAISDQRA EAANNQRAET PAVQGVESSA AGRAPGVTPG ENSTTRP00000006275/1-477 ---------- ---------A EAISDQRAET PAVQGVESSA AGRALGVSPG 651 700 ENSP00000303158/1-538 ARARKQVKTV RFQTPGRFSW FCKRRRAFWH TPRLPTLPKR VPRAGEARNL ENSBTAP00000024194/1-510 ARTRKPVKTV RFQTPGRFSW FRKRRRAFWH TPRLPTLPKR VPRAGEARSL bmy_06584T0/1-664 SRTRKQVKTV RFQTPGRFSW FRKRRRAFWH TPRLPTLPKR VPRAGGARSL BACU002135/1-493 SRTRKQVKTV RFQTPGRFSW FRKRRRAFWH TPRLPTLPKR VPRAGGARSL ENSTTRP00000006275/1-477 SRTRKQVKTV RFQTPGRFSW FRKRRRAFWY TPRLPTLPKR VPRAGGARSL 701 750 ENSP00000303158/1-538 RVLRAEARAE AEQGEQEDQL ENSBTAP00000024194/1-510 RVLRAEARAE AEHGEQEDQL bmy_06584T0/1-664 RVLRAEARAE AEHGEQEDQL BACU002135/1-493 RVLRAEARAE AEHGEQEDQL ENSTTRP00000006275/1-477 RVLRAEARAE AEHGEQENQL