KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:41 2014 Check: 00 .. Name: bmy_17454T0/1-334 Len: 578 Check: 9921 Weight: 1.00 Name: ENSP00000378360/1-575 Len: 578 Check: 3171 Weight: 1.00 Name: ENSBTAP00000024227/1-578 Len: 578 Check: 5731 Weight: 1.00 Name: BACU005400/1-577 Len: 578 Check: 2854 Weight: 1.00 Name: ENSTTRP00000010499/1-574 Len: 578 Check: 1161 Weight: 1.00 // 1 50 bmy_17454T0/1-334 ---------- ---------- -----MRWSW AWGH------ ---------- ENSP00000378360/1-575 MTSKKLVNSV AGCADDALAG LVACNPNLQL LQGHRVALRS DLDSLKGRVA ENSBTAP00000024227/1-578 MTSKKLVNSV AGCADDALAG LVACNPSLQL LQGHRVALRS DLDSLKGRVA BACU005400/1-577 MTSKKLVNSV AGCADDALAG LVACNPNLQL LQGHRVALRS DLDSLKGQVA ENSTTRP00000010499/1-574 MTSKKLVNSV AGCADDALAG LVTCNPNLQL LQGHRVALRS DLDSLKGQVA 51 100 bmy_17454T0/1-334 ---------- ---------- -LQGMW---- -------SFR ASLRDAPR-- ENSP00000378360/1-575 LLSGGGSGHE PAHAGFIGKG MLTGVIAGAV FTSPAVGSIL AAIRAVAQAG ENSBTAP00000024227/1-578 LLSGGGSGHE PAHAGFIGKG MLTGVIAGAV FTSPAVGSIL AAIRAVAQAG BACU005400/1-577 LLSGGGSGHE PAHAGFVGKG MLTGVIAGAV FTSPAVGSIL AAIRAVAQAG ENSTTRP00000010499/1-574 LLSGGGSGHE PAHAGFIGKG MLTGVIAGAV FTSPAVGSIL AAIRAVAQAG 101 150 bmy_17454T0/1-334 ---------- -ISDRL---- ---------- PTDL------ ---------- ENSP00000378360/1-575 TVGTLLIVKN YTGDRLNFGL AREQARAEGI PVEMVVIGDD SAFTVLKKAG ENSBTAP00000024227/1-578 TVGTLLIVKN YTGDRLNFGL AREQARAEGI PVEMVVVGDD SAFTVLKKAG BACU005400/1-577 TVGTLLIVKN YTGDRLNFGL AREQARAEGI PVEMVVIGDD SAFTVLKKAG ENSTTRP00000010499/1-574 TVGTLLIVKN YTGDRLNFGL AREQARAEGI PVEMVVIGDD SAFTVLKKAG 151 200 bmy_17454T0/1-334 -RTPTPKVLV FLLT------ ---------- ---------- ---------- ENSP00000378360/1-575 RRGLCGTVLI HKVAGALAEA GVGLEEIAKQ VNVVAKAMGT LGVSLSSCSV ENSBTAP00000024227/1-578 RRGLCGTVLI HKVAGALAEA GVGLEEITDR VSVVAKAMGT LGVSLSSCSV BACU005400/1-577 RRGLCGTVLI HKVAGALAEA GVGLEEITDR VSEVAKAMGT LGLSLSSCSV ENSTTRP00000010499/1-574 RRGLCGTVLI HKVAGALAEA GAGLEEITDR VSEVAKAM-T LGVSLSSCSV 201 250 bmy_17454T0/1-334 ---------- ---LFLSLML WGE------- ---------- ---------- ENSP00000378360/1-575 PGSKPTFELS ADEVELGLGI HGEAGVRRIK MATADEIVKL MLDHMTNTTN ENSBTAP00000024227/1-578 PGSKPTFELS ADEVELGLGI HGEAGVRRIK MATADEIVAL MLDHMTSSSN BACU005400/1-577 PGSKPTFELS ADEVELGLGI HGEAGVRRIK MATADEIVEL MLDHMTSSSN ENSTTRP00000010499/1-574 PGSKPTFELS ADEVELGLGI HGEAGVHRIK MATADEIVAL MLDHMTSSSN 251 300 bmy_17454T0/1-334 ---VPVIPSF SHTLPCSG-- ---------- ------TAEG RGVKIARALV ENSP00000378360/1-575 ASHVPVQPGS SVVMMVNNLG GLSFLELGII ADATVRSLEG RGVKIARALV ENSBTAP00000024227/1-578 ASHVPVPPGS SVVLMVNNLG GLSFLELGII ADAAVCSLEG RGVKIARALV BACU005400/1-577 MSHVPVQSGS SVVLMVNNLG GLSFLELGII ADAAVRSLEG RGVKIARALV ENSTTRP00000010499/1-574 VSHVPVRSGS SVVLMVNNLG GLSFLELGII ADAAVRSLEG RGVKIARALV 301 350 bmy_17454T0/1-334 GTFMSALEMP GISLTLLLVD EPLLKLIDAE TTASAWPNVA KVLVTGRERC ENSP00000378360/1-575 GTFMSALEMP GISLTLLLVD EPLLKLIDAE TTAAAWPNVA AVSITGRKRS ENSBTAP00000024227/1-578 GTFMSALEMP GVSLTLLLVD EPLLKLIDAE TTASAWPNVA KVWVTGRKRS BACU005400/1-577 GTFMSALEMP GISLTLLLVD EPLLKLIDAE TTASAWPNVA KVLVTGRKRC ENSTTRP00000010499/1-574 GTFMSALDMP GISLTLLLVD EPLLKLIDAE TTALAWPNVA KVSVTGRKRC 351 400 bmy_17454T0/1-334 RAAPAKPLEA PDSTAXGGAA SKQMVLVLER VCATLLGLEE HLNALDRAAG ENSP00000378360/1-575 RVAPAEPQEA PDSTAAGGSA SKRMALVLER VCSTLLGLEE HLNALDRAAG ENSBTAP00000024227/1-578 RAAPTEPLAA PDSTTAAGEA SKQMVLVLEW VCTTLLGLEE HLNALDRAAG BACU005400/1-577 RAAPAKPLEA PDSTAAGGAA SKQMVLVLER VCATLLGLEG HLNALDRAAG ENSTTRP00000010499/1-574 RAAPAKPLEA PDSTAAGGAA SKQMVLVLER VCATLLGLEE RLNALDRAAG 401 450 bmy_17454T0/1-334 DGDCGTTHSC AARAIQGWLK EGPPPASPAQ LLSKLSLLLL EKMGGSSGAL ENSP00000378360/1-575 DGDCGTTHSR AARAIQEWLK EGPPPASPAQ LLSKLSVLLL EKMGGSSGAL ENSBTAP00000024227/1-578 DGDCGTTHSR AARAIQGWLK EGPPPASPAQ LLSKLSFLLL EKMGGSSGAL BACU005400/1-577 DGDCGSTHSC AARAIQGWLK EGPPPASPAQ LLSKLSLLLL EKMGGSSGAL ENSTTRP00000010499/1-574 DGDCGTTHSC AARAIQGWLK EGPPPASPAQ LLSKLALLLL EKMGGSSGAL 451 500 bmy_17454T0/1-334 YGLFLTAAAQ PLKAKTDLPA WSAAMDAGLE AMQKYGKAAP GDRTM----- ENSP00000378360/1-575 YGLFLTAAAQ PLKAKTSLPA WSAAMDAGLE AMQKYGKAAP GDRTMLDSLW ENSBTAP00000024227/1-578 YGLFLTAAAQ PLKAKTDLPA WSAAMDAGLE AMQKYGKAAP GDRTMLDSLW BACU005400/1-577 YGLFLTAAAQ PLKAKTDLPA WSAAMDAGLE AMQKYGKAAP GDRTMLDSLW ENSTTRP00000010499/1-574 YGLFLTAAAQ PLKAKTDLPA WSAAMDAGLE AMQKYGKAAP GDRTMLDSLW 501 550 bmy_17454T0/1-334 ---------- ---------- -----SAEAA AEATRNMEAG AGRASYISSA ENSP00000378360/1-575 AAGQELQAWK SPGADLLQVL TKAVKSAEAA AEATKNMEAG AGRASYISSA ENSBTAP00000024227/1-578 AAGQELQAWK SPGANMLQIL TKAVKSAEAA AEATKNMEAG AGRASYISSA BACU005400/1-577 AAGQELQAWK SPGAN-LQIL TKAVKSAEAA AEATRNMEAG AGRASYISSA ENSTTRP00000010499/1-574 AAGQELQAWK SPGAN-LQIL SKAVKSAEAA AEATRNMEAG AGRASYISSA 551 600 bmy_17454T0/1-334 RLDQPDPGAV AAAAILRAIL EVLQSQDA ENSP00000378360/1-575 RLEQPDPGAV AAAAILRAIL EVLQS--- ENSBTAP00000024227/1-578 RLDQPDPGAV AAAAILRAIL EVLQSQGA BACU005400/1-577 RLDQPDPGAV AAAAILRAIL EVLQSQDA ENSTTRP00000010499/1-574 RLDQPDPGAV AAAAILRAIL EVLQSQ--