KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:42 2014 Check: 00 .. Name: ENSP00000256652/1-1021 Len: 1080 Check: 7881 Weight: 1.00 Name: ENSTTRP00000012207/1-1019 Len: 1080 Check: 9367 Weight: 1.00 Name: ENSBTAP00000024229/1-1021 Len: 1080 Check: 8477 Weight: 1.00 Name: bmy_10610T0/1-1009 Len: 1080 Check: 7499 Weight: 1.00 Name: BACU020015/1-1011 Len: 1080 Check: 972 Weight: 1.00 // 1 50 ENSP00000256652/1-1021 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012207/1-1019 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024229/1-1021 ---------- ---------- ---------- ---------- ---------- bmy_10610T0/1-1009 MGQFGLYRKN NATRLWCWQS FLTFDDVLGY LDILEFQEVQ LSKLKGLGKG BACU020015/1-1011 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000256652/1-1021 ---MAGISYV ASFF---LLL TKLSIGQREV TVQKGPLFRA EGYPVSIGCN ENSTTRP00000012207/1-1019 ---MARFPRV ASFF---LFL TKLSTAQREV TVQKGPLFRA EGYPISIGCN ENSBTAP00000024229/1-1021 ---SIFIPF- -SFS---YLQ AKLSIGQREV TVQKGPLFRA EGYPVSIGCN bmy_10610T0/1-1009 KSPPIRIVFI LKFLYSAYTH AKLSTGQREV TVQKGPLFRA EGYPISIGCN BACU020015/1-1011 ---------- -SFS---CLQ AKLSTGQREV TVQKGPLFRA EGYPISIGCN 101 150 ENSP00000256652/1-1021 VTGHQGPSEQ HFQWSVYLPT NPTQEVQIIS TKDAAFSYAV YTQRVRSGDV ENSTTRP00000012207/1-1019 VTGYRGPSEQ HFQWSVYLPT APTQEIQIIS TKDATFSYAV YARRVQSKEI ENSBTAP00000024229/1-1021 VTGHQGPSEQ HFQWSVYLPT APTQEIQIIS TMDDTFSYVV YANRVKSREI bmy_10610T0/1-1009 VTGHRGPSEQ HFQWSVYLPT APTQEIQIIS TKDATFSYAV YARRVQSREI BACU020015/1-1011 VTGHRGPSEQ HFQWSVYLPT APTQEIQIIS TKDATFSYAV YARRVQSREI 151 200 ENSP00000256652/1-1021 YVERVQGNSV LLHISKLQMK DAGEYECHTP NTDEKYYGSY SAKTNLIVIP ENSTTRP00000012207/1-1019 YVEKVQGNSV FLHIAKLQMK DSGEYECHTP NTDGKYYGSY SAKTNLIVIP ENSBTAP00000024229/1-1021 YVERVQGNSV FLHISKLQMK DTGEYECFTP NTDEKYYGTY SAKTNLTVIP bmy_10610T0/1-1009 YVEKVQGNSV FLHISK---- ---------- ---------- ---------- BACU020015/1-1011 YVEKVQGNSV FLHISKLQMK DSGEYECHTP NTDGKYYGSY SAKTNLIVIP 201 250 ENSP00000256652/1-1021 DTLSATMSSQ TLGKEEGEPL ALTCEASKAT AQHTHLSVTW YLTQDGGGSQ ENSTTRP00000012207/1-1019 DTLSAAMTSQ TLSKEEGEPL ELTCESSKAT AQHTHLSVTW YLMQDGERSQ ENSBTAP00000024229/1-1021 DTLSVAMAPQ TLNKEEGEQL ELTCEVSKAT AQHTHLSITW YLMKDGEGSQ bmy_10610T0/1-1009 ---------- TLSKEEGEPL ELTCESSKAT AQHTHLSVTW YLMQDGERSQ BACU020015/1-1011 DTLSAAMTSQ TLSKEEGEPL ELTCESSKAT AQHTHLSVTW YLMQDGERSQ 251 300 ENSP00000256652/1-1021 ATEIISLSKD FILVPGPLYT ERFAASDVQL NKLGPTTFRL SIERLQSSDQ ENSTTRP00000012207/1-1019 ASKIISLSKD FMLLPGPLYT ERFAAGDVRL DKLGVTTFRL SIGRLRPSDQ ENSBTAP00000024229/1-1021 ASKIISLSKD FTLLPGPLFT ERFAAGDVRL DKLGVTTFRL SMGRLQPSDQ bmy_10610T0/1-1009 ASKIISLSKD FMLLPGPLYT ERFAAGDVRL DKLGVTTFRL SIGRLRPSDQ BACU020015/1-1011 ASKIISLSKD FVLLPGPLYT ERFAAGDVRL DKLGVTTFRL SIGRLRPSDQ 301 350 ENSP00000256652/1-1021 GQLFCEATEW IQDPDETWMF ITKKQTDQTT LRIQPAVKDF QVNITADSLF ENSTTRP00000012207/1-1019 GQLFCEATEW IQDPDETWTS ITKKQTDQTT LRVRPAVRDF QVNITAESTV ENSBTAP00000024229/1-1021 GQLFCEASEW IQDPDETWTS ITKKQTDRTT LRVQPTVRDF QVNIRAESTV bmy_10610T0/1-1009 GQLFCEATEW IQDPDETWTC ITKKQTDQIT LRVQPAVRDF QVNITAESTV BACU020015/1-1011 GQLFCEATEW IQDPDETWTS ITKKQTDQTT LRVQPAVRDF QVNITAESTV 351 400 ENSP00000256652/1-1021 AEGKPLELVC LVVSSGRDPQ LQGIWFFNGT EIAHIDAGGV LGLKNDYKER ENSTTRP00000012207/1-1019 PEGKPLELVC LVMGGGRDPQ LHGTWFFNDI EMAHIDAGGV LGLKENYQER ENSBTAP00000024229/1-1021 HEGKSLELVC LVMGGGQDPH LQATWFFNDV EMAHIDAGGV LDLKKDYQER bmy_10610T0/1-1009 PEGKPLELVC LVXGGGQDPQ LQGTWFFNDI EMAHIDAGGV LGLKKDYQER BACU020015/1-1011 PEGKPLELVC LVVGGGQDPQ LQGTWFFNDI EMAHIDAGGV LSLKKDYQER 401 450 ENSP00000256652/1-1021 ASQGELQVSK LGPKAFSLKI FSLGPEDEGA YRCVVAEVMK TRTGSWQVLQ ENSTTRP00000012207/1-1019 ASQGQLQVSK LSPKSFSLKI FSVGPRDEGA YRCAVAEVTR AQMGSWQVLQ ENSBTAP00000024229/1-1021 ASQGQLQVSK LSPKSFSLKI FSVGPENEGA YRCVVAEVTR AQMGSWQVLQ bmy_10610T0/1-1009 ASQGQLQVSK LSPKAFSLKI FSVGPEDEGA YRCAVAEVTR AQMGSWQVLQ BACU020015/1-1011 ASQGQLQVSK LSPKAFSLKI FSVGPEDEGA YRCDVAEVTR SQMGSWQVLQ 451 500 ENSP00000256652/1-1021 RKQSPDSHVH LRKPAARSVV MSTKNKQQVV WEGETLAFLC KAGGAESPLS ENSTTRP00000012207/1-1019 KKQSPDSYVH LRKPAARYVV MSTKNRKQAV WEGEALTXXX XXXXXXXXXX ENSBTAP00000024229/1-1021 KKQSPDSFVR LWKQAARNVV VSTKNRQQAV WEGEALTLLC KADGAENLLT bmy_10610T0/1-1009 KKKSPDSYVH LRKPAARHVV VSTKNRQQAV WEGETLTLLC KVGGAESLLS BACU020015/1-1011 KKKSPDSYVH LRKPAARHVV VSAKNRQQAV WEGEALTLLC KVGGAGSLLS 501 550 ENSP00000256652/1-1021 VSWWHIPRDQ TQPEFVAGMG QDGIVQLGAS YGVPSYHGNT RLEKMDWATF ENSTTRP00000012207/1-1019 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000024229/1-1021 VAWWHVPQNQ TQPVFVAGME QDGTVKLGAS YAELDNLRNA RLEKMDWATF bmy_10610T0/1-1009 VTWWHIPQDQ TQPEFVAGMG QDGTMQLGAS YGELDNHSNT RLEKTDWATF BACU020015/1-1011 VTWWHVPQDQ TQPDFVAGMG QDGTMQLGAS YGELDNHSNT RLEKTDWATF 551 600 ENSP00000256652/1-1021 QLEITFTAIT DSGTYECRVS EKSRNQARDL SWTQKISVTV KSLESSLQVS ENSTTRP00000012207/1-1019 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXSSLHVS ENSBTAP00000024229/1-1021 QLEIASTTLT DSGMYECRVS ERTGSQARNQ SWTQKLSITV KPLESSLQVS bmy_10610T0/1-1009 QLEITSTTIT DSGTYECRVS ERTRNQARDR SWTQKMSVTV KPLESSLQVS BACU020015/1-1011 QLEITSTTIT DSGTYECRVS ERTRNQARDR SWTQKMSVTV KPLESSLQVS 601 650 ENSP00000256652/1-1021 LMSRQPQVML TNTFDLSCVV RAGYSDLKVP LTVTWQFQPA SSHIFHQLIR ENSTTRP00000012207/1-1019 LMSRQPQVKL TNTFDLSCIV GVRYSDLKVL LTVTWQFQAA RSRAFDLLLR ENSBTAP00000024229/1-1021 LMSRLPQVKL TNTFDLSCIV RVGYSDLKVP LTVTWLFQPP RSRAFDLLLQ bmy_10610T0/1-1009 LMSRQPQVKL TNTFDLSCIV RVGYSDLKVP LTVTWQFQAA RSRAFDLLLR BACU020015/1-1011 LMSRQPQVKL TNTFDLSCIV RVGYSDLKVP LTVTWQFQAA RSRAFDLLLR 651 700 ENSP00000256652/1-1021 ITHNGTIEWG NFLSRFQKKT KVSQSLFRSQ LLVHDATEEE TGVYQCEVEV ENSTTRP00000012207/1-1019 ITHNGTIEWG NFLPQFQKKT KVSQSLFRSQ LLIHDATEEE AGVYQCNVEV ENSBTAP00000024229/1-1021 ITHNGTIEWG RGLPQFQRKT KISQSSFHSR LLIHDATEEE AGVYQCKVEV bmy_10610T0/1-1009 ITHNGTIEWG NFLPQFQKKT KVSQSLFRSQ LLIHDATEEE AGVYQCNVEV BACU020015/1-1011 ITHNGTIEWG NFLPQFQKKT KVSQSLFRSQ LLIHDATEEE AGVYQCNVEV 701 750 ENSP00000256652/1-1021 YDRNSLYNNR PPRASAISHP LRIAVTLPES KLKVNSRSQV QELSINSNTD ENSTTRP00000012207/1-1019 YDRSSLHXXX XXXXXXXXXX XXXXXXXXXS KLKVNSSSQV QEISINSNTD ENSBTAP00000024229/1-1021 YDRNSLHTNS PVRASASSHP LRITVTLPES KLKVNSSSQV QEISINSNTD bmy_10610T0/1-1009 YDRSSLHTNG PVRASAISHP LRITVTLP-- ---------- ---------D BACU020015/1-1011 YDRTTKGNHV AQQGTSRTRS SGEAFFRIES KLKVNSSSQV QEISINSNTD 751 800 ENSP00000256652/1-1021 IECSILSRSN GNLQLAIIWY FSPVSTNASW LKILEMDQTN VIKTGDEFHT ENSTTRP00000012207/1-1019 IECNILYQST GNLRLAVTWY FSATSTNATW LRILEMDRSH VVKYGDEFQT ENSBTAP00000024229/1-1021 IECSVLSQSP GNLQLVVTWY FSPISTDAPW LRILEVDQNH VVKYGDEFQT bmy_10610T0/1-1009 IECNILCQST GNLRLAVIWY FSAMSTNAPW LRILEMDRTH VVKYGDEFQT BACU020015/1-1011 IECNILCQST GNLRLAVTWY FSAMSANAPW LRILEMDRTH VVKYGDEFQT 801 850 ENSP00000256652/1-1021 PQRKQKFHTE KVSQDLFQLH ILNVEDSDRG KYHCAVEEWL LSTNGTWHKL ENSTTRP00000012207/1-1019 AWRKQKFHAE KVSQDSFQLH ILNVEDSDQG KYRCAVEEWL WSTNGTWHKL ENSBTAP00000024229/1-1021 TRRKQKFHAE KVSQDLFQLH ILNVEDSDQG RYRCAVEEWF WSTNSTWHKL bmy_10610T0/1-1009 TRRKQKFHAV KVSQDLFQLH ILNVEDSDQG KYHCAVEEWL WSTNGTWHKL BACU020015/1-1011 TRRKQKFHAE KVSQDLFLLH ILNVEDGDQG KYHCAVEEWL WSTNGTWHKL 851 900 ENSP00000256652/1-1021 GEKKSGLTEL KLKPTGSKVR VSKVYWTENV TEHREVAIRC SLESVGSSAT ENSTTRP00000012207/1-1019 GEKTSGLTEL KLRPTGSKVR ISKVSGTKNA SEHSEVAIRC SLESAGSPAS ENSBTAP00000024229/1-1021 GGQTSGLTEL KLRPTGSKVR ISKGSRTENA SEHSEVTIYC SLEGAISPAS bmy_10610T0/1-1009 GEKTSGLTEL KLRPTGSKVR ISKVSGTENA SEHSEVAIRC SLESTGSPAS BACU020015/1-1011 GEKMSGLTEL KLRPTGSKVR ISKVSGRENV SEHSEVAIRC SLESTGSPAS 901 950 ENSP00000256652/1-1021 LYSVMWYWNR ENSGSKLLVH LQHDGLLEYG EEGLRRHLHC YRSSSTDFVL ENSTTRP00000012207/1-1019 LFSVMWYWNR ENSGSKMLVH LQHDGLLEYG EEGLRRRLHC YRSSPEDFVL ENSBTAP00000024229/1-1021 LFSVMWYRQR EDSGSRMLVH LQHDGLLEYG EEGLRWRLHS YRSSAADFVL bmy_10610T0/1-1009 LFSVMWYWNR ENSGSKMLVH LQHDGLLEYG EEGLRRRLHC YRSSPADFVL BACU020015/1-1011 LFSVMWYWNR ENSGSKMLVH LQHDGLLEYG EEGLRRRLRC YRSSPADFVL 951 1000 ENSP00000256652/1-1021 KLHQVEMEDA GMYWCRVAEW QLHGHPSKWI NQASDESQRM VLTVLPS--E ENSTTRP00000012207/1-1019 MIHRVEMEDA GMYWCRVAEW QLHGNPSKWV SQSSDESQRV VLTVLPS--E ENSBTAP00000024229/1-1021 ALQRVEMKDA GKYWCKVAEW QLHSNPSKWV SQASDESQPV VLRVLPSGTE bmy_10610T0/1-1009 MLHRVEMEDA GMYWCRVAEW QLHGNPSKWV NQASDESQHV VLTVLPS--E BACU020015/1-1011 MLHRVEMEDA GMYWCRVAEW QLHGNPSKWV NQASDESQHV VLRVLPS--E 1001 1050 ENSP00000256652/1-1021 PTLPSRICSS APLLYFLFIC PFVLLLLLLI SLLCLYWKAR KLSTLRSNTR ENSTTRP00000012207/1-1019 PTFPSRICSS APLLYFLFIC PFLMLILLFI SLLCLYCKAR KLSTLSLSIR ENSBTAP00000024229/1-1021 PTLPSRICSS APLVYFLFIC PFVILLFLLM SLLCLYCKAK KLSALRLSMQ bmy_10610T0/1-1009 PTFPSRICSS APLLYFLFIC PFVILTLLFI SLLCLYWKAR KLSTLSLNRQ BACU020015/1-1011 PTFPSRICSS VPLLYFLFIC PFVILTLLFI SLLCLYWKAR KLSTLSLNRQ 1051 1100 ENSP00000256652/1-1021 KEKALWVDLK E-AGGVTTNR REDEEEDEGN ENSTTRP00000012207/1-1019 KEKALWVDLK S-AGSRTAHR LEEDGEDS-- ENSBTAP00000024229/1-1021 KEQSLWVNLK E-AGGRTTNR MGDDDEDRGN bmy_10610T0/1-1009 KEKALWVKEQ IFPKAKLMLR FLNIEV---- BACU020015/1-1011 KEKALWVDLK G-AGSRTTHR LEEDGEDS--