KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:22:43 2014 Check: 00 .. Name: bmy_05537T0/1-990 Len: 1104 Check: 734 Weight: 1.00 Name: ENSP00000440674/1-1004 Len: 1104 Check: 1421 Weight: 1.00 Name: ENSTTRP00000015117/1-999 Len: 1104 Check: 9741 Weight: 1.00 Name: ENSBTAP00000024230/1-1098 Len: 1104 Check: 4413 Weight: 1.00 // 1 50 bmy_05537T0/1-990 ---------- ---------- ---------- ---------- ---------- ENSP00000440674/1-1004 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015117/1-999 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024230/1-1098 SRGRPAPGAA GGAGSRGRAG RLPPRPRRPR PSRKGRRRGE PAAEAERAPH 51 100 bmy_05537T0/1-990 ---------- ---------- ---------- ---MGLESER QPRAPWTSVM ENSP00000440674/1-1004 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000015117/1-999 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000024230/1-1098 PARRPGTPAR EVDAPHPLSR ERPGAEPGAE DSWLGLESEC QPWGPWTSIM 101 150 bmy_05537T0/1-990 ETESEQSSSS TNGGSGSGGS SRPQIAQMSL YERQAV---Q ALQRQPNAAQ ENSP00000440674/1-1004 ETESEQNSNS TNGSSSSGGS SRPQIAQMSL YERQAVQALQ ALQRQPNAAQ ENSTTRP00000015117/1-999 ETESEQSSNS TNGSSGSGGS SRPQIAQMSL YERQAVQALQ ALQRQPNAAQ ENSBTAP00000024230/1-1098 ETESEQNSNS TNGSSGSGGS SRPQIAQMSL YERQAVQALQ ALQRQPNAAQ 151 200 bmy_05537T0/1-990 YFHQFMLQQQ LSNAQLHSLA AVQQATIAAS RQASSPNASS AQQQTTTTQA ENSP00000440674/1-1004 YFHQFMLQQQ LSNAQLHSLA AVQQATIAAS RQASSPNTST TQQQTTTTQA ENSTTRP00000015117/1-999 YFHQFMLQQQ LSNAQLHSLA AVQQATIAAS RQASSPNTSP AQQQTTTTQA ENSBTAP00000024230/1-1098 YFHQFMLQQQ LSNAQLHSLA AVQQATIAAS RQASSPNTST AQQQTTTTQA 201 250 bmy_05537T0/1-990 SINLATTSAA QLISRSQSVS SPSATTLTQS VLLGNTTSPP LNQSQAQMYL ENSP00000440674/1-1004 SINLATTSAA QLISRSQSVS SPSATTLTQS VLLGNTTSPP LNQSQAQMYL ENSTTRP00000015117/1-999 SINLATTSAA QLISRSQSVS SPSATTLTQS VLLGNTTSPP LNQSQAQMYL ENSBTAP00000024230/1-1098 SINLATTSAA QLISRSQSVS SPSATTLTQS VLLGNTTSPP LNQSQAQMYL 251 300 bmy_05537T0/1-990 RPQLGNLLQV NRTLGRNVPL ASQLILMPNG AVAAVQQEAP SAQSPGVHTD ENSP00000440674/1-1004 RPQLGNLLQV NRTLGRNVPL ASQLILMPNG AVAAVQQEVP SAQSPGVHAD ENSTTRP00000015117/1-999 RPQLGNLLQV NRTLGRNVPL ASQLILMPNG AVAAVQQEAP SAQPPGVHAD ENSBTAP00000024230/1-1098 RPQLGNLLQV NRTLGRNVPL ASQLILMPNG AVAAVQQEAP SAQSPGVHTD 301 350 bmy_05537T0/1-990 ADQVQNLAVR NQQASAQGPQ MQGSAQKAIP PGASPVSSLS QASSQALAVA ENSP00000440674/1-1004 ADQVQNLAVR NQQASAQGPQ MQGSTQKAIP PGASPVSSLS QASSQALAVA ENSTTRP00000015117/1-999 ADQVQNLAVR NQQASAQGPQ MQGSAQKAIP PGASPVSSLS QASSQALAVA ENSBTAP00000024230/1-1098 ADQVQNLAVR NQQASAQGPQ MQGSAQKAIP PGASPVSSLS QASSQALAVA 351 400 bmy_05537T0/1-990 QASSGASGQS LNLSQAGGGS GNSIPGSMGP --GGQAPGGL GQLPSSGMGG ENSP00000440674/1-1004 QASSGATNQS LNLSQAGGGS GNSIPGSMGP GGGGQAHGGL GQLPSSGM-G ENSTTRP00000015117/1-999 QASSGASGQS LNLSQAGGGS GNSIPGSMGP --GGQTPGGL GQLPSSGMGG ENSBTAP00000024230/1-1098 QASSGASGQS LNLSQAGGGS GTSIPGSMGP GGGGQAPGGL GQLPSSGMGG 401 450 bmy_05537T0/1-990 GGSCPRKGTG VVQPLPAAQA VTVSQGSQTE AESAAAKKAE ADGTGQQSVG ENSP00000440674/1-1004 GGSCPRKGTG VVQPLPAAQT VTVSQGSQTE AESAAAKKAE ADGSGQQNVG ENSTTRP00000015117/1-999 GGSCPRKGTG VVQPLPAAQA VTVSQGSQTE AESAAAKKAE ADGTGQQSVG ENSBTAP00000024230/1-1098 GGSCPRKGTG VVQPLPAAQA VTVSQGSQTE AESAAAKKAE ADGTGQQNVG 451 500 bmy_05537T0/1-990 MNLTRTATPA PSQTLISSAT YTQIQPHSLI QQQQQIHLQQ KQVVIQQQIA ENSP00000440674/1-1004 MNLTRTATPA PSQTLISSAT YTQIQPHSLI QQQQQIHLQQ KQVVIQQQIA ENSTTRP00000015117/1-999 MNLTRTATPA PSQTLISSAT YTQIQPHSLI QQQQQIHLQQ KQVVIQQQIA ENSBTAP00000024230/1-1098 MNLTRTATPA PSQTLISSAT YTQIQPHSLI QQQQQIHLQQ KQVVIQQQIA 501 550 bmy_05537T0/1-990 IHHQQQFPHR QAQLLHTATH LQLAQQQQQQ QQQQQA---- ---------- ENSP00000440674/1-1004 IHHQQQFQHR QSQLLHTATH LQLAQQQQQQ QQQQQQQQQP QATTLTAPQP ENSTTRP00000015117/1-999 IHHQQQFPHR QAQLLHTATH LQLAQQQQQQ QQQQQQ---- QAAPLPAPPP ENSBTAP00000024230/1-1098 IHHQQQFPHR QSQLLHTATH LQLAQQQQQQ QQQQQA---- --TTLTAPQP 551 600 bmy_05537T0/1-990 ---------- --XXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000440674/1-1004 PQVPPTQQVP PSQSQQQAQT LVVQPMLQSS PLSLPPDAAP KPPIPIQSKP ENSTTRP00000015117/1-999 PQGPPAQQAP PSQSQQPAQT LVVQPMLQSS PLSLPPDPAP KPPVPIQSKP ENSBTAP00000024230/1-1098 PPGPPTQPVP PSPSQQPAQT LVVQPMLQSS PLSLPPDPAP KPPIPIQSKP 601 650 bmy_05537T0/1-990 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV GTRQPGTAQA QALGLAQLAA ENSP00000440674/1-1004 PVAPIKPPQL GAAKMSAAQQ PPPHIPVQVV GTRQPGTAQA QALGLAQLAA ENSTTRP00000015117/1-999 PVAPVKPPQL GAAKMSATQQ PPPHIPVQVV GTRQPGTAQA QALGLAQLAA ENSBTAP00000024230/1-1098 PAAPLKPPQL GAAKMSAAQQ PPPHIPVQVV GTRQPGTAQA QALGLAQLAA 651 700 bmy_05537T0/1-990 AVPASRGMPG TVQPGQAHLA SSPPSSQPAG ALQECPPALA SGMTLAPVQG ENSP00000440674/1-1004 AVPTSRGMPG TVQSGQAHLA SSPPSSQAPG ALQECPPTLA PGMTLAPVQG ENSTTRP00000015117/1-999 AVPASRGMTG TVQPGQAHVA SSPPSSQAPG ALQEGPPALA SGMTLAPVQG ENSBTAP00000024230/1-1098 AVPTSRGMPG TVPPGQAHLA SSPPSSQAPG ALQECPPTLA SGMTLAPVQG 701 750 bmy_05537T0/1-990 TAHVVKGAAT ASSPVVAQVP AAFYMQSVHL PGKPQTLPVK RKAESEEERD ENSP00000440674/1-1004 TAHVVKGGAT TSSPVVAQVP AAFYMQSVHL PGKPQTLAVK RKADSEEERD ENSTTRP00000015117/1-999 TAHVVKGAAT ASSPVVAQVP AAFYMQSVHL PGKPQTLPVK RKAESEEERD ENSBTAP00000024230/1-1098 TAHVVKGGAT TSSPVVAQVP AAFYMQSVHL PGKPQTLAVK RKAESEEERD 751 800 bmy_05537T0/1-990 DTSTLSSMLP AKASPVVESP KAMEEKGGLG DKAEPVTSVN ASTPSSDVVA ENSP00000440674/1-1004 DVSTLGSMLP AKASPVAESP KVMDEKSSLG EKAESVANVN ANTPSSELVA ENSTTRP00000015117/1-999 DISTLSSMLP AKASPVVESP KAMEEKGGLG DKAEPVTSVN AGAPSSDVVA ENSBTAP00000024230/1-1098 DVSTLSSMIP AKTSPVVESP KAMEEKGGLG EKAEPVTSAN TNTLSSDIVA 801 850 bmy_05537T0/1-990 LAPAPSAPPP TLAMVSRQMG DSKPPQAIVK PQILTHIIEG FVIQEGAEPF ENSP00000440674/1-1004 LTPAPSVPPP TLAMVSRQMG DSKPPQAIVK PQILTHIIEG FVIQEGAEPF ENSTTRP00000015117/1-999 LAPAPSAPPP TLAMVSRQMG DSKPPQAIVK PQILTHIIEG FVIQEGAEPF ENSBTAP00000024230/1-1098 LAPAPSAPPP SLAMVSRQMG DSKPPQAIVK PQILTHIIEG FVIQEGAEPF 851 900 bmy_05537T0/1-990 PVGCSQLLKE SEKPLQTGLV TGLNENQSGG PLGGDSPSAE PDKKANLLKC ENSP00000440674/1-1004 PVGCSQLLKE SEKPLQTGLP TGLTENQSGG PLGVDSPSAE LDKKANLLKC ENSTTRP00000015117/1-999 PVGCSQLLKE SEKPLQTGLV TGLNENQSGG PLGGDSPSAE LDKKANLLKC ENSBTAP00000024230/1-1098 PVGCSQLLKE SEKPLQTGLT TGLNENQSGG PLGGDSPSAE LDKKANLLKC 901 950 bmy_05537T0/1-990 EYCGKYAPAE QFRGSKRFCS MTCAKRYNVS CSHQFRLKRK KMKEFQEANY ENSP00000440674/1-1004 EYCGKYAPAE QFRGSKRFCS MTCAKRYNVS CSHQFRLKRK KMKEFQEANY ENSTTRP00000015117/1-999 EYCGKYAPAE QFRGSKRFCS MTCAKRYNVS CSHQFRLKRK KMKEFQEANY ENSBTAP00000024230/1-1098 EYCGKYAPAE QFRGSKRFCS MTCAKRYNVS CSHQFRLKRK KMKEFQEANY 951 1000 bmy_05537T0/1-990 ARVRRRGPRR SSSDIARAKI QGKRHRGQED SSRGSDNSSY DEALSPTSPG ENSP00000440674/1-1004 ARVRRRGPRR SSSDIARAKI QGKCHRGQED SSRGSDNSSY DEALSPTSPG ENSTTRP00000015117/1-999 ARVRRRGPRR SSSDIARAKI QGKRHRGQED SSRGSDNSSY DEALSPTSPG ENSBTAP00000024230/1-1098 ARVRRRGPRR SSSDIARAKI QGKRHRGQED SSRGSDNSSY DEALSPTSPG 1001 1050 bmy_05537T0/1-990 PLSVRAGHGE RDLGNPNTAP PTPELHGINP VFLSSNPSRW SVEEVYEFIA ENSP00000440674/1-1004 PLSVRAGHGE RDLGNPNTAP PTPELHGINP VFLSSNPSRW SVEEVYEFIA ENSTTRP00000015117/1-999 PLSVRAGHGE RDLGNPNTAP PTPELHGINP VFLSSNPSRW SVEEVYEFIA ENSBTAP00000024230/1-1098 PLSVRAGHGE RDLGNPNTAP PTPELHGINP VFLSSNPSRW SVEEVYEFIA 1051 1100 bmy_05537T0/1-990 SLQGCQEIAE EFRSQEIDGQ ALLLLKEEHL MSAMNIKLGP ALKICAKINV ENSP00000440674/1-1004 SLQGCQEIAE EFRSQEIDGQ ALLLLKEEHL MSAMNIKLGP ALKICAKINV ENSTTRP00000015117/1-999 SLQGCQEIAE EFRSQEIDGQ ALLLLKEEHL MSAMNIKLGP ALKICAKINV ENSBTAP00000024230/1-1098 SLQGCQEIAE EFRSQEIDGQ ALLLLKEEHL MSAMNIKLGP ALKICAKINV 1101 1150 bmy_05537T0/1-990 LKET ENSP00000440674/1-1004 LKET ENSTTRP00000015117/1-999 LKET ENSBTAP00000024230/1-1098 LKET