KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:44 2014 Check: 00 .. Name: ENSTTRP00000011479/1-422 Len: 424 Check: 9684 Weight: 1.00 Name: ENSP00000403925/1-424 Len: 424 Check: 3689 Weight: 1.00 Name: ENSBTAP00000024242/1-424 Len: 424 Check: 3821 Weight: 1.00 Name: bmy_06996T0/1-329 Len: 424 Check: 4952 Weight: 1.00 Name: BACU017356/1-319 Len: 424 Check: 602 Weight: 1.00 // 1 50 ENSTTRP00000011479/1-422 MDQPSGRSFM QVLCEKYSPE NFPYRRGPGM GVHVPATPQG SPMKDRLNLP ENSP00000403925/1-424 MDQPSGRSFM QVLCEKYSPE NFPYRRGPGM GVHVPATPQG SPMKDRLNLP ENSBTAP00000024242/1-424 MDQPSGRSFM QVLCEKYSPE NFPYRRGPGM GVHVPATPQG SPMKDRLNLP bmy_06996T0/1-329 ---------M QVLCEKYSPE NFPYRRGPGM GVHVPATPQG SPMKDRLNLP BACU017356/1-319 MDQPSGRSFM QVLCEKYSPE NFPYRRGPGM GVHVPATPQG SPMKDRLNLP 51 100 ENSTTRP00000011479/1-422 SVLVLNSCGI TCAGDEKEIA AFCAHVSELD LSDNKLEDWH EVSKIVSNVP ENSP00000403925/1-424 SVLVLNSCGI TCAGDEKEIA AFCAHVSELD LSDNKLEDWH EVSKIVSNVP ENSBTAP00000024242/1-424 SVLVLNSCGI TCAGDEKEIA AFCAHVSELD LSDNKLEDWH EVSKIVSNVP bmy_06996T0/1-329 SVLVLNSCGI TCAGDEKEIA AFCAHVSELD LSDNKLEDWH EVSKIVSNVP BACU017356/1-319 SVLVLNSCGI TCAGDEKEIA AFCAHVSELD LSDNKLEDWH EVSKIVSNVP 101 150 ENSTTRP00000011479/1-422 QLEFLNLSSN PLNLSVLERT CAGSFSGVRK LVLNNSKASW ETVHTILQEL ENSP00000403925/1-424 QLEFLNLSSN PLNLSVLERT CAGSFSGVRK LVLNNSKASW ETVHMILQEL ENSBTAP00000024242/1-424 QLEFLNLSSN PLNLSVLERT CAGSFSGVRK LVLNNSKASW ETVHTILQEL bmy_06996T0/1-329 QLEFLNLSSN PLNLSVLERT CAGSFSRVRK LVLNNSKASW ETVHTILQEL BACU017356/1-319 QLEFLNLSSN PLNLSVLERT CAGSFSRVRK LVLNNSKASW ETVHTILQEL 151 200 ENSTTRP00000011479/1-422 PDLEELFLCL NDYETVSCPS ICCPSLKLLH ITDNNLQDWT EIRKLGVMFP ENSP00000403925/1-424 PDLEELFLCL NDYETVSCPS ICCHSLKLLH ITDNNLQDWT EIRKLGVMFP ENSBTAP00000024242/1-424 PDLEELFLCL NDYETVSCPS ICCHSLKLLH ITDNNLQDWT EIRKLGVMFP bmy_06996T0/1-329 PDLEELFLCL NDYETVSCPS ICCPSLKLLH ITDNNLQDWT EIRKLGVMFP BACU017356/1-319 PDLEELFLCL NDYEAVSCPS ICCPSLKLLH ITDNNLQDWT EIRKLGVMFP 201 250 ENSTTRP00000011479/1-422 SLDTLVLANN HVNAIEEPDD SLARLFPNLR SISLHKAGLR SWEDIDKLNS ENSP00000403925/1-424 SLDTLVLANN HLNAIEEPDD SLARLFPNLR SISLHKSGLQ SWEDIDKLNS ENSBTAP00000024242/1-424 SLDTLVLANN HLNAIEEPDD SLARLFPNLR SISLHKSGLQ SWEDIDKLNS bmy_06996T0/1-329 SLDTLVLANN HLNAIEEPDD SLARLFPNLR SISLHKAGLQ SWEDIDKLNS BACU017356/1-319 SLDTLVLANN HLNAIEEPDD SLARLFPNLR SISLHKAGLQ SWEDIDKLNS 251 300 ENSTTRP00000011479/1-422 FPKLEEVRLL GIPLLQPYTT EERRKLVIAR LPSVSKLNGS VVTDGEREDS ENSP00000403925/1-424 FPKLEEVRLL GIPLLQPYTT EERRKLVIAR LPSVSKLNGS VVTDGEREDS ENSBTAP00000024242/1-424 FPKLEEVRLL GIPLLQPYTT EERRKLVIAR LPSVSKLNGS VVTDGEREDS bmy_06996T0/1-329 FPKLEEVRLL GIPLLQPYTT EERRKLVIAR LPSVSKLNGS VVTDGEREDS BACU017356/1-319 FPKLEEVRLL GIPLLQPYTT EERRKLVIAR LPSVSKLNGS VVTDGEREDS 301 350 ENSTTRP00000011479/1-422 ERFFIRYYVD VPHEEEPFRY HELVTKYGKL EPLAEVDLRP QSSAKVEVHF ENSP00000403925/1-424 ERFFIRYYVD VPQEEVPFRY HELITKYGKL EPLAEVDLRP QSSAKVEVHF ENSBTAP00000024242/1-424 ERFFIRYYVD VPQEEVPFRY HELITKYGKL EPLAEVDLRP QSSAKVEVHF bmy_06996T0/1-329 ERFFIRYYID VPQEEVPFR- ---------- ---------- ---------- BACU017356/1-319 ERFFIRYHVD VPQEEVPFR- ---------- ---------- ---------- 351 400 ENSTTRP00000011479/1-422 NDQVEEMTIR LDQTVAELKK QLKTLVQLPT SNMLLYYFDH EAPFGPEEMK ENSP00000403925/1-424 NDQVEEMSIR LDQTVAELKK QLKTLVQLPT SNMLLYYFDH EAPFGPEEMK ENSBTAP00000024242/1-424 NDQVEEMSIR LDQTVAELKK QLKTLVQLPT SNMLLYYLDH EAPFGPEEMK bmy_06996T0/1-329 ---------- ---------- -LKKNTENNK TNTHVHIVQN ---------- BACU017356/1-319 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000011479/1-422 YSSRALHSFG IRDGDKILIK TK-- ENSP00000403925/1-424 YSSRALHSFG IRDGDKIYVE SKTK ENSBTAP00000024242/1-424 YSSRALHSFG IRDGDKIFVE SKTK bmy_06996T0/1-329 ---------- ---------- ---- BACU017356/1-319 ---------- ---------- ----