KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:22:44 2014 Check: 00 .. Name: ENSP00000313079/1-295 Len: 295 Check: 5885 Weight: 1.00 Name: ENSBTAP00000024243/1-289 Len: 295 Check: 2428 Weight: 1.00 Name: bmy_20820T0/1-294 Len: 295 Check: 4334 Weight: 1.00 Name: ENSTTRP00000012086/1-183 Len: 295 Check: 2041 Weight: 1.00 // 1 50 ENSP00000313079/1-295 MWGARRSSVS SSWNAASLLQ LLLAALLAAG ARASGEYCHG WLDAQGVWRI ENSBTAP00000024243/1-289 MWAGCHP--- ---DAASLLR LLLAALLAAG ALASGEYCHG WLDAQGVWRI bmy_20820T0/1-294 MWGGRRPAAS SR-DAASLLR LLLAALLAAG ARASGEYCHG WLDAQGVWRI ENSTTRP00000012086/1-183 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000313079/1-295 GFQCPERFDG GDATICCGSC ALRYCCSSAE ARLDQGGCDN DRQQGAGEPG ENSBTAP00000024243/1-289 GFQCPERFDG GDATICCGSC ALRYCCSSAD ARLDQGGCDN DRQQGAGEPG bmy_20820T0/1-294 GFQCPERFDG GDATICCGSC ALRYCCSSAE ARLDQGGCDN DRQQGAGEPG ENSTTRP00000012086/1-183 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000313079/1-295 RADKDGPDGS AVPIYVPFLI VGSVFVAFII LGSLVAACCC RCLRPKQDPQ ENSBTAP00000024243/1-289 RADKDGPDGS AVPIYVPFLI VGSVFVAFIV LGSLVAACCC RCLRPKQEPQ bmy_20820T0/1-294 RADKDGPDGS AVPIYVPFLI VGSVFVAFII LGSLVAACCC RCLRPKQEPQ ENSTTRP00000012086/1-183 ---------- --PIYVPFLI VGSVFVAFII LGSLVAACCC RCLRPKQEPQ 151 200 ENSP00000313079/1-295 QSRAPGGNRL METIPMIPSA STSRGSSSRQ SSTAASSSSS ANSGARAPPT ENSBTAP00000024243/1-289 LSRAPGGPRL VETIPMIPSA STSRGSSSRQ SSTAASSSSS ANSGARAPPT bmy_20820T0/1-294 QSRAPGGPRM VETIPMIPSA STSRGSSSRQ SSTAASSSSS ANSGARGPPT ENSTTRP00000012086/1-183 QSRAPGGPRM VETIPMIPSA STSRGSSSRQ SSTAASSSSS ANSGARGPPT 201 250 ENSP00000313079/1-295 RSQTNCCLPE GTMNNVYVNM PTNFSVLNCQ QATQIVPHQG QYLHPPYVGY ENSBTAP00000024243/1-289 RSQTNCCLPE GTMNNVYVNM PTNFSVLNCQ QATQIVPHQG QYLHPPFVGY bmy_20820T0/1-294 RSQTNCCLPE GTMNNVYVNM PTNFSVLNCQ QATQIVPHQG QYLHPPFVGY ENSTTRP00000012086/1-183 RSQTNCCLPE GTMNNVYVNM PTNFSVLNCQ QATQIVPHQG QYLHPPFVGY 251 300 ENSP00000313079/1-295 TVQHDSVPMT AVPPFMDGLQ PGYRQIQSPF PHTNSEQKMY PAVTV ENSBTAP00000024243/1-289 TVQPDSVPLT PVPPFLDGLQ TGYRQLQAPF PHTNSEQKMY PAVTV bmy_20820T0/1-294 AVQHDSVPVT PVPPFLDGLQ TGYRQIQAPF PHTNSEQKMY PAVTV ENSTTRP00000012086/1-183 TVQHDSVPMT PVPPFLDGLQ TGYRQIQAPF PHTNSEQKMY PAVTV