KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:22:44 2014 Check: 00 .. Name: ENSP00000255409/1-383 Len: 391 Check: 5711 Weight: 1.00 Name: ENSBTAP00000024253/1-391 Len: 391 Check: 2362 Weight: 1.00 Name: bmy_19974T0/1-339 Len: 391 Check: 100 Weight: 1.00 Name: ENSTTRP00000009014/1-382 Len: 391 Check: 1629 Weight: 1.00 // 1 50 ENSP00000255409/1-383 --------MG VKASQTGFVV LVLLQCCSAY KLVCYYTSWS QYREGDGSCF ENSBTAP00000024253/1-391 MPSSAAARMG LRAAQTGFVV LVLLQSCAAY KLICYYTSWS QYREGDGSCF bmy_19974T0/1-339 ------LSSG LSQRVPGSI- -LAFSSGAAY KLICYYTSWS QYRE------ ENSTTRP00000009014/1-382 --------MG LRVAQTGFVV LVLPQSCAAY KLICYYTSWS QYREGDGSCF 51 100 ENSP00000255409/1-383 PDALDRFLCT HIIYSFANIS NDHIDTWEWN DVTLYGMLNT LKNRNPNLKT ENSBTAP00000024253/1-391 PDAIDPFLCT HVIYSFANIS NNEIDTWEWN DVTLYDTLNT LKNRNPNLKT bmy_19974T0/1-339 -DAIDPFLCT HIIYSFANIS NNEIDTWEWN DVMLYDTLNT LKN------- ENSTTRP00000009014/1-382 PDAIDPFLCT HIIYSFANIS NNAIDTWEWN DVTLYDTLNT LKNRNPNLKT 101 150 ENSP00000255409/1-383 LLSVGGWNFG SQRFSKIASN TQSRRTFIKS VPPFLRTHGF DGLDLAWLYP ENSBTAP00000024253/1-391 LLSVGGWNFG SQRFSKIASK TQSRRTFIKS VPPFLRTHGF DGLDLAWLYP bmy_19974T0/1-339 ---------- --RFSKIASN TWSRRTFIKS VPPFLRTHGF NGLDLTWLYP ENSTTRP00000009014/1-382 LLSVGGWNFG SQRFSKITSN TWSRRTFIKL VPPFLRTHGF DGLDRAWLYP 151 200 ENSP00000255409/1-383 GRRDKQHFTT LIKEMKAEFI KEAQPGKKQL LLSAALSAGK VTIDSSYDIA ENSBTAP00000024253/1-391 GWRDKRHLTT LVKEMKAEFV REAQAGTEQL LLSAAVPAGK IAIDRGYDIA bmy_19974T0/1-339 GRRDKQHLTT LVKEMKAEFA REAQAGAEQL LLSAAV---- ---------- ENSTTRP00000009014/1-382 GQRDEQHLTA LVKEMEAEFA RETQAGAEQL LLSAAVPAGK IAIDRGYDIA 201 250 ENSP00000255409/1-383 KISQHLDFIS IMTYDFHGAW RGTTGHHSPL FRGQEDASPD RFSNTDYAVG ENSBTAP00000024253/1-391 QISRHLDFIS LLTYDFHGAW RQTVGHHSPL FRGQEDASSD RFSNADYAVS bmy_19974T0/1-339 ----HLDFIS LLTYDFHGAW RQTIAHHSPL FRGQEDTSSD RFSNADYAVS ENSTTRP00000009014/1-382 QISRHLHFIS LLTYDFHGAW RQTIAHHSPL FRGREDTSSD RFSNADYAVS 251 300 ENSP00000255409/1-383 YMLRLGAPAS KLVMGIPTFG RSFTLASSET GVGAPISGPG IPGRFTKEAG ENSBTAP00000024253/1-391 YMLRLGAPAN KLVMGIPTFG RSYTLASSKT DVGAPISGPG IPGQFTKEKG bmy_19974T0/1-339 YVLRLGAQAN KLVMGIPTFG RSFTLASSKT DVGAPTSGPG IPGRFTKEKG ENSTTRP00000009014/1-382 CVLRPGAQAN KLVMGISTFG RSFTLASSKT DVGAPTSGPG IPGRFTKEKG 301 350 ENSP00000255409/1-383 TLAYYEICDF LRGATVHRIL GQQVPYATKG NQWVGYDDQE SVKSKVQYLK ENSBTAP00000024253/1-391 ILAYYEICDF LHGATTHRFR DQQVPYATKG NQWVAYDDQE SVKNKARYLK bmy_19974T0/1-339 TLAYYETCDF LRGATVHRLL GQQVPYATKG NQWVGYDDQE SVKNKVQYLR ENSTTRP00000009014/1-382 TLTYYEICDF LRGATVHRLL GQQVPYATKG NQWVGYDDQE SIKNKVRYLR 351 400 ENSP00000255409/1-383 DRQLAGAMVW ALDLDDFQGS FCGQDLRFPL TNAIKDALAA T ENSBTAP00000024253/1-391 NRQLAGAMVW ALDLDDFRGT FCGQNLAFPL TSAIKDVLAE V bmy_19974T0/1-339 NTQLAGAMVW ALDLDDFQGT FCGQNLHFPL TSTIKDALAE V ENSTTRP00000009014/1-382 NRELAGAMVW ALDLDDFQGT FCGQNLHFPL TSAIEDA-AE V