KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:49 2014 Check: 00 .. Name: BACU015013/1-548 Len: 558 Check: 3748 Weight: 1.00 Name: ENSP00000265113/1-542 Len: 558 Check: 983 Weight: 1.00 Name: ENSBTAP00000024287/1-542 Len: 558 Check: 1610 Weight: 1.00 Name: bmy_07493T0/1-420 Len: 558 Check: 4836 Weight: 1.00 Name: ENSTTRP00000010322/1-542 Len: 558 Check: 1400 Weight: 1.00 // 1 50 BACU015013/1-548 MTKSNGEEAR MGGRMERFQQ GVRKRTLLAK KKVQNITKED VKSYLFRNAF ENSP00000265113/1-542 MTKSNGEEPK MGGRMERFQQ GVRKRTLLAK KKVQNITKED VKSYLFRNAF ENSBTAP00000024287/1-542 MTKSNGEEAR LGGRMERFQQ GVRKRTLLAK KKVQNITKED VKSYLFRNAF bmy_07493T0/1-420 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010322/1-542 MTKSNGEEAR MGGRMERFQQ GVRKRTLLAK KKVQNITKED VKSYLFRNAF 51 100 BACU015013/1-548 VLLTVTAVIV GTILGFTLRP YKMSYRQVKY FSFPGELLMR MLQMLVLPLI ENSP00000265113/1-542 VLLTVTAVIV GTILGFTLRP YRMSYREVKY FSFPGELLMR MLQMLVLPLI ENSBTAP00000024287/1-542 VLLTVTAVIV GTILGFTLRP YRMSYREVKY FSFPGELLMR MLQMLVLPLI bmy_07493T0/1-420 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010322/1-542 VLLTVTAVIV GTILGFTLRP YKMSYREVKY FSFPGELLMR MLQMLVLPLI 101 150 BACU015013/1-548 ISSLVTGEAV NSFSIELLQS AVLGAEEGSH RAVKQGLRAL ---------- ENSP00000265113/1-542 ISSLVTGMAA -------LDS KASG------ ---KMGMRAV VYYMTTTIIA ENSBTAP00000024287/1-542 ISSLVTGMAA -------LDS KASG------ ---KMGMRAV VYYMTTTIIA bmy_07493T0/1-420 -------MAA -------LDS KASG------ ---KMGMRAV VYYMTTTIIA ENSTTRP00000010322/1-542 ISSLVTGMAA -------LDS KASG------ ---KMGMRAV VYYMTTTIIA 151 200 BACU015013/1-548 DVLPLWRDEM FNSENLKRDQ LSSAGYRIKE EAAPSGCMYP WNMFPPNLVE ENSP00000265113/1-542 VVIGIIIVII IHPGKGTKEN MHREGKIVRV TAADAFLDLI RNMFPPNLVE ENSBTAP00000024287/1-542 VVIGIIIVII IHPGKGTKEN MHREGKIVQV TAADAFLDLI RNMFPPNLVE bmy_07493T0/1-420 VVIGIIVVII IHPGKGTKEN MHREGKIVQV TAADAFLDLI RNMFPPNLVE ENSTTRP00000010322/1-542 VVIGIIIVII IHPGKGTKEN MHREGKIVQV TAEDAFLDLI RNMFPPNLVE 201 250 BACU015013/1-548 ACFKQFKTNY EKRSFKVPIQ SNETLVGAVI NNVSEAMETL TRITEELVPV ENSP00000265113/1-542 ACFKQFKTNY EKRSFKVPIQ ANETLVGAVI NNVSEAMETL TRITEELVPV ENSBTAP00000024287/1-542 ACFKQFKTNY EKRSFKVPIQ PNETLVGAVI NNVSEAMETL TRITEELVPV bmy_07493T0/1-420 ACFK------ ---------Q SNETLVGAVI NNVSEAMETL TRITEELVPV ENSTTRP00000010322/1-542 ACFKQFKTNY EKRSFKVPIQ SNETLVGAVI NNVSEAMETL TRITEELVPV 251 300 BACU015013/1-548 PGSVNGVNAL GLVVFSMCFG FVIGNMKEQG QALREFFDSL NEAIMRLVAV ENSP00000265113/1-542 PGSVNGVNAL GLVVFSMCFG FVIGNMKEQG QALREFFDSL NEAIMRLVAV ENSBTAP00000024287/1-542 PGSVNGVNAL GLVVFSMCFG FVIGNMKEQG QALREFFDSL NEAIMRLVAV bmy_07493T0/1-420 PGSVNGVNAL GLVVFSMCFG FVIGNMKEQG QALREFFDSL NEAIMRLVAV ENSTTRP00000010322/1-542 PGSVNGVNAL GLVVFSMCFG FVIGNMKEQG QALREFFDSL NEAIMRLVAV 301 350 BACU015013/1-548 IMWYAPLGIL FLIAGKIVEM EDMGVIGGQL AMYTVTVIVG LLIHAVIVLP ENSP00000265113/1-542 IMWYAPVGIL FLIAGKIVEM EDMGVIGGQL AMYTVTVIVG LLIHAVIVLP ENSBTAP00000024287/1-542 IMWYAPLGIL FLIAGKIVEM EDMGVIGGQL AMYTVTVIVG LLIHAVIVLP bmy_07493T0/1-420 IMWYAPLGIL FLIAGKIVEM EDMGVIGGQL AMYTVTVIVG LLIHAVIVLP ENSTTRP00000010322/1-542 IMWYAPLGIL FLIAGKIVEM EDMGVIGGQL AMYTVTVIVG LLIHAVIVLP 351 400 BACU015013/1-548 LLYFLVTRKN PWVFIGGLLQ ALITALGTSS SSATLPITFK CLEENNGVDK ENSP00000265113/1-542 LLYFLVTRKN PWVFIGGLLQ ALITALGTSS SSATLPITFK CLEENNGVDK ENSBTAP00000024287/1-542 LLYFLVTRKN PWVFIGGLLQ ALITALGTSS SSATLPITFK CLEENNGVDK bmy_07493T0/1-420 LLYFLVTRKN PWVFIGGLLQ ALITALGTSS SSATLPITFK CLEENNGVDK ENSTTRP00000010322/1-542 LLYFLVTRKN PWIFIGGLLQ ALITALGTSS SSATLPITFK CLEENNGVDK 401 450 BACU015013/1-548 RVTRFVLPVG ATINMDGTAL YEALAAIFIA QVNNFDLNFG QIITISITAT ENSP00000265113/1-542 RVTRFVLPVG ATINMDGTAL YEALAAIFIA QVNNFELNFG QIITISITAT ENSBTAP00000024287/1-542 RVTRFVLPVG ATINMDGTAL YEALAAIFIA QVNNFELNFG QIITISITAT bmy_07493T0/1-420 RVTRFVLPVG ATINMDGTAL YEALAAIFIA QVNNFDLNFG QIITISITAT ENSTTRP00000010322/1-542 RVTRFVLPVG ATINMDGTAL YEALAAIFIA QVNNFDLNFG QIITISITAT 451 500 BACU015013/1-548 AASIGAAGIP QAGLVTMVIV LTSVGLPTDD ITLIIAVDWF LDRLRTTTNV ENSP00000265113/1-542 AASIGAAGIP QAGLVTMVIV LTSVGLPTDD ITLIIAVDWF LDRLRTTTNV ENSBTAP00000024287/1-542 AASIGAAGIP QAGLVTMVIV LTSVGLPTDD ITLIIAVDWF LDRLRTTTNV bmy_07493T0/1-420 AASIGAAGIP QAGLVTMVIV LTSVGLPTDD ITLIIAVDWF LDRLRTTTNV ENSTTRP00000010322/1-542 AASIGAAGIP QAGLVTMVIV LTSVGLPTDD ITLIIAVDWF LDRLRTTTNV 501 550 BACU015013/1-548 LGDSLGAGIV EHLSRHELKN RDVEMGNSVI EENEMKKPYQ LIAQESEIEK ENSP00000265113/1-542 LGDSLGAGIV EHLSRHELKN RDVEMGNSVI EENEMKKPYQ LIAQDNETEK ENSBTAP00000024287/1-542 LGDSLGAGIV EHLSRHELKN RDVEMGNSVI EENEMKKPYQ LISQESEIEK bmy_07493T0/1-420 LGDSLGAGIV EHLSRHELKN RDVEMGNSVI EENEMKKPYQ LIAQESEIEK ENSTTRP00000010322/1-542 LGDSLGAGIV EHLSRHELKN RDVEMGNSVI EENEMKKPYQ LIAQESEIEK 551 600 BACU015013/1-548 SIDSETKM ENSP00000265113/1-542 PIDSETKM ENSBTAP00000024287/1-542 SMDSETKM bmy_07493T0/1-420 SIDSETKM ENSTTRP00000010322/1-542 SIDSETKM