KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:49 2014 Check: 00 .. Name: BACU003266/1-220 Len: 245 Check: 2634 Weight: 1.00 Name: ENSP00000322594/1-217 Len: 245 Check: 1617 Weight: 1.00 Name: ENSBTAP00000024288/1-217 Len: 245 Check: 1671 Weight: 1.00 Name: bmy_18374T0/1-240 Len: 245 Check: 6504 Weight: 1.00 Name: ENSTTRP00000002946/1-141 Len: 245 Check: 8708 Weight: 1.00 // 1 50 BACU003266/1-220 MEAGGCR--Y QFRIALLGDA AVGKTSLLWR YVAGA-PGIP EPEPELESVP ENSP00000322594/1-217 ---METIWIY QFRLIVIGDS TVGKSCLLHR FTQGRFPGLR SPACD----P ENSBTAP00000024288/1-217 ---METIWIY QFRLIVIGDS TVGKSCLLHR FTQGRFPGLR SPACD----P bmy_18374T0/1-240 MVKKGTHKAN AFTGCLLPTA FVIKVLPSSK YLFGNWQSHK KGISS----G ENSTTRP00000002946/1-141 ---------- ---------- ---------- ---------- ---------- 51 100 BACU003266/1-220 TVGVEFYSRT LQ-------- --LRAGPRVK LQLWDTAGQE RFR------- ENSP00000322594/1-217 TVGVDFFSRL LE-------- --IEPGKRIK LQLWDTAGQE RFR------- ENSBTAP00000024288/1-217 TVGVDFFSRL LE-------- --IEPGKRIK LQLWDTAGQE RFR------- bmy_18374T0/1-240 PSGSFYPRRP IYLVLLRSVP CLLKIPSRPS EDLSVSTQER KFQRKIDVPS ENSTTRP00000002946/1-141 ---------- ---------- ---------- ---------- ---------- 101 150 BACU003266/1-220 ---CITRSFY RNVVGVLLVF DVTNRKSFEH IRDWHQEVMA TQGPDKAIFL ENSP00000322594/1-217 ---SITRSYY RNSVGGFLVF DITNRRSFEH VKDWLEEAKM YVQPFRIVFL ENSBTAP00000024288/1-217 ---SITRSYY RNSVGGFLVF DITNRRSFEH VKDWLEEAKM HVQPFQIVFL bmy_18374T0/1-240 SSLSITRSYY RNSVGGFLVF DITNRRSFEH VKDWLEEAKM HVQPFQIVFL ENSTTRP00000002946/1-141 ---SITRSYY RNSVGGFLVF DITNRRSFEH VKDWLEEAKM RVHPFQIVFL 151 200 BACU003266/1-220 LVGHKSDLQS TRCVSAQEAE ELAASLGMAF METSAKNNCN VDLAFNTLTD ENSP00000322594/1-217 LVGHKCDLAS QRQVTREEAE KLSADCGMKY IETSAKDATN VEESFTILTR ENSBTAP00000024288/1-217 LVGHKCDLAS QRQVTREEAE KLSADCGMKY IETSAKDATN VEESFTILTR bmy_18374T0/1-240 LVGHKCDLAS QRQVTREEAE RLSADCGMKY IETSAKDATN IEESFTILTR ENSTTRP00000002946/1-141 LVGHKCDLAS QRQVTREEAE RLSADCGMKY IETSAKDATN VEESFTILTR 201 250 BACU003266/1-220 AIQQALQQGD IKLEEDWGGV R--LIQNTQI SRPPSRTQHP GPCKC ENSP00000322594/1-217 DIYELIKKGE ICIQDGWEGV KSGFVPNT-V HSSEEAVKPR KECFC ENSBTAP00000024288/1-217 DIYELIKRGE ICIQDGWEGV KSGFVPNT-V HSSEEAVKPR KECFC bmy_18374T0/1-240 DIYELIKRGE ICIQDGWEGV KSGFVPNT-V HSSEEAVKPR KECFC ENSTTRP00000002946/1-141 DIYELIKRGE ICIQDGWEGV RSGFVPNT-V HSSEEAVKPR KECFC