KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:49 2014 Check: 00 .. Name: ENSP00000265052/1-313 Len: 313 Check: 2046 Weight: 1.00 Name: ENSBTAP00000024289/1-240 Len: 313 Check: 4631 Weight: 1.00 Name: ENSTTRP00000016220/1-308 Len: 313 Check: 8086 Weight: 1.00 Name: bmy_17088T0/1-237 Len: 313 Check: 2831 Weight: 1.00 Name: BACU007930/1-247 Len: 313 Check: 2056 Weight: 1.00 // 1 50 ENSP00000265052/1-313 METGPEDPSS MPEESSPRRT PQSIPYQDLP HLVNADGQYL FCRYWKPTGT ENSBTAP00000024289/1-240 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016220/1-308 ----PEEPFR MPEESSPRRT PQSVPYQDLP HLVNADGQYL FCRYWKPSGT bmy_17088T0/1-237 ---------- ---------- ---------- ---------- ---------- BACU007930/1-247 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000265052/1-313 PKALIFVSHG AGEHSGRYEE LARMLMGLDL LVFAHDHVGH GQSEGERMVV ENSBTAP00000024289/1-240 ---------- ---------- ---MLVGLGL LVFAHDHVGH GQSEGERMVV ENSTTRP00000016220/1-308 PRALVFVSHG AGEHCGRYDE LARMLVGLEL LVFAHDHVGH GQSEGERMVV bmy_17088T0/1-237 ----MFLSKG ---------- -CRIC----- ------ELGH GQSEGERMVV BACU007930/1-247 -----MVATV ---------- -VQQCDVLDT AELALKDVGH GQSEGERMVV 101 150 ENSP00000265052/1-313 SDFHVFVRDV LQHVDSMQKD YPGLPVFLLG HSMGGAIAIL TAAERPGHFA ENSBTAP00000024289/1-240 SDFHVFIRDV LQHVDAVQKD YPGLPVFLLG HSMGGAICIL TAAERPGHFS ENSTTRP00000016220/1-308 SDFQVFIRDV LQHVDVVQID HPGLPIFLLG HSMGGAITIL TAAERPGHFS bmy_17088T0/1-237 SDFQVFIRDV LQHVDVVQKD HPGLPIFLLG HSMGGAITIL TAAERPGHFS BACU007930/1-247 SDFQVFIRDV LQHVDVVQKD HPGLPIFLLG HSMGGAITIL TAAERPGHFS 151 200 ENSP00000265052/1-313 GMVLISPLVL ANPESATTFK VLAAKVLNLV LPNLSLGPID SSVLSRNKTE ENSBTAP00000024289/1-240 GMVLISPLVV ANPESATLFK VFAAKVLNLV LPNMSLGRID SSVLSRNKTE ENSTTRP00000016220/1-308 GMVLISPLVL ASPESATTFK VLAVKVLNLV LPNVSLGRID SSTLSRNKTE bmy_17088T0/1-237 GMVLISPLVL ANPESATTFK VLAAKVLNLV LPNVSLGRID SSTLSRNKTE BACU007930/1-247 GMVLISPLVL ANPESATTFK VLAAKVLNLV LPNVSLGRID SSTLSRNKTE 201 250 ENSP00000265052/1-313 VDIYNSDPLI CRAGLKVCFG IQLLNAVSRV ERALPKLTVP FLLLQGSADR ENSBTAP00000024289/1-240 VDIYNTDPLV CRAGLKVCFG NQLLNAVSRV ERALPKLTLP FLLLQGSADR ENSTTRP00000016220/1-308 VDIYNRTPLI CRAGLK-CFG TQLLNAVSRV ERALPKLTLP FLLLQGSADR bmy_17088T0/1-237 VDIYNTDPLI CRAGLKVCFG IQLLNAVSRV ERALPKLTLP FLLLQGSADR BACU007930/1-247 VAIYNTDPLI CRAGLKVCFG IQLLNAVSRV ERALPRLTLP FLLLQGSADR 251 300 ENSP00000265052/1-313 LCDSKGAYLL MELAKSQDKT LKIYEGAYHV LHKELPEVTN SVFHEINMWV ENSBTAP00000024289/1-240 LCNSRGAYLL MESAKSQDKT LKIYEGAYHI LHKELPEVTS SVFREINTWV ENSTTRP00000016220/1-308 LCDSRGAYLL MESAKSQDKT LKIYEGAYHI LHKELPEVTS SVFREINTWV bmy_17088T0/1-237 LCDSRGAYLL MESAKSQDKT LKIYEGAYHV LHKELPEVTS SVFREINTWV BACU007930/1-247 LCDSRGAYLL MESAKSQDKT LKIYEGAYHV LHKELPEVTS SVFREINTWV 301 350 ENSP00000265052/1-313 SQRTATAGTA SPP ENSBTAP00000024289/1-240 SQRTAVEGMG CPP ENSTTRP00000016220/1-308 SQRTAAAGTG SPP bmy_17088T0/1-237 SQRTAAAGTG SPP BACU007930/1-247 SQRTAAAGTG SPP