KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:51 2014 Check: 00 .. Name: ENSTTRP00000011672/1-913 Len: 914 Check: 2169 Weight: 1.00 Name: bmy_07724T0/1-720 Len: 914 Check: 8234 Weight: 1.00 Name: ENSP00000377941/1-914 Len: 914 Check: 6691 Weight: 1.00 Name: ENSBTAP00000024301/1-892 Len: 914 Check: 1728 Weight: 1.00 Name: BACU010759/1-849 Len: 914 Check: 8435 Weight: 1.00 // 1 50 ENSTTRP00000011672/1-913 MDHYDSQQTN DYMQPEEDWD RDLLLDPAWE KQQRKTFTAW CNSHLRKAGT bmy_07724T0/1-720 MDHYDSQQTN DYMQPEEDWD RDLLLDPAWE KQQRKTFTAW CNSHLRKAGT ENSP00000377941/1-914 MDHYDSQQTN DYMQPEEDWD RDLLLDPAWE KQQRKTFTAW CNSHLRKAGT ENSBTAP00000024301/1-892 MDHYDSQQTN DYMQPEEDWD RDLLLDPAWE KQQRKTFTAW CNSHLRKAGT BACU010759/1-849 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011672/1-913 QIENIEEDFR DGLKLMLLLE VISGERLAKP ERGKMRVHKI SNVNKALDFI bmy_07724T0/1-720 QIENIEEDFR DGLKLMLLLE VISGERLAKP ERGKMRVHKI SNVNKALDFI ENSP00000377941/1-914 QIENIEEDFR DGLKLMLLLE VISGERLAKP ERGKMRVHKI SNVNKALDFI ENSBTAP00000024301/1-892 QIENIEEDFR DGLKLMLLLE VISGERLAKP ERGKMRVHKI SNVNKALDFI BACU010759/1-849 ---------- -----MLLLE VISGERLAKP ERGKMRVHKI SNVNKALDFI 101 150 ENSTTRP00000011672/1-913 ASKGVKLVSI GAEEIVDGNV KMTLGMIWTI ILRFAIQDIS VEETSAKEGL bmy_07724T0/1-720 ASKGVKLVSI GAEEIVDGNV KMTLGMIWTI ILRFAIQDIS VEETSAKEGL ENSP00000377941/1-914 ASKGVKLVSI GAEEIVDGNV KMTLGMIWTI ILRFAIQDIS VEETSAKEGL ENSBTAP00000024301/1-892 ASKGVKLVSI GAEEIVDGNV KMTLGMIWTI ILRFAIQDIS VEETSAKEGL BACU010759/1-849 ASKGVKLVSI GAEEIVDGNV KMTLGMIWTI ILRFAIQDIS VEETSAKEGL 151 200 ENSTTRP00000011672/1-913 LLWCQRKTAP YKNVNIQNFH ISWKDGLGFC ALIHRHRPEL IDYGKLRKDD bmy_07724T0/1-720 LLWCQRKTAP YKNVNIQNFH IRF------- ---------- ---------- ENSP00000377941/1-914 LLWCQRKTAP YKNVNIQNFH ISWKDGLGFC ALIHRHRPEL IDYGKLRKDD ENSBTAP00000024301/1-892 LLWCQRKTAP YKNVNIQNFH ISWKDGLGFC ALIHRHRPEL IDYGKLRKDD BACU010759/1-849 LLWCQRKTAP YKNVNIQNFH ISWKDGLGFC ALIHRHRPEL IDYGKLRKDD 201 250 ENSTTRP00000011672/1-913 PLTNLNTAFD VAEKYLDIPK MLDAEDIVGT ARPDEKAIMT YVSSFYHAFS bmy_07724T0/1-720 ---------- ----FLT--- -----DIVGT ARPDEKAIMT YVSSFYHAFS ENSP00000377941/1-914 PLTNLNTAFD VAEKYLDIPK MLDAEDIVGT ARPDEKAIMT YVSSFYHAFS ENSBTAP00000024301/1-892 PLTNLNTAFD VAEKYLDIPK MLDAEDIVGT ARPDEKAIMT YVSSFYHAFS BACU010759/1-849 PLTNLNTAFD VAEKYLDIPK MLDAEDIVGT ARPDEKAIMT YVSSFYHAFS 251 300 ENSTTRP00000011672/1-913 GAQKXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXLLEWI RRTIPWLENR bmy_07724T0/1-720 GAQKAETAAN RICKVLAVNQ ENEQLMEDYE KLASDLLEWI RRTIPWLENR ENSP00000377941/1-914 GAQKAETAAN RICKVLAVNQ ENEQLMEDYE KLASDLLEWI RRTIPWLENR ENSBTAP00000024301/1-892 GAQKAETAAN RICKVLAVNQ ENEQLMEDYE KLASDLLEWI RRTIPWLENR BACU010759/1-849 GAQKAETAAN RICKVLAVNQ ENEQLMEDYE KLASDLLEWI RRTIPWLENR 301 350 ENSTTRP00000011672/1-913 VPENTMHAMQ QKLEDFRDYR RLHKPPKVQE KCQLEINFNT LQTKLRLSNR bmy_07724T0/1-720 APENTMHAMQ QKLEDFRDYR RLHKPPK--- ---------- ---------- ENSP00000377941/1-914 VPENTMHAMQ QKLEDFRDYR RLHKPPKVQE KCQLEINFNT LQTKLRLSNR ENSBTAP00000024301/1-892 APENTMHAMQ QKLEDFRDYR RLHKPPKVQE KCQLEINFNT LQTKLRLSNR BACU010759/1-849 APENTMHAMQ QKLEDFRDYR RLHKPPKVQE KCQLEINFNT LQTKLRLSNR 351 400 ENSTTRP00000011672/1-913 PAFMPSEGRM VSDINNAWGC LEQAEKGYEE WLLNEIRRLE RLDHLAEKFR bmy_07724T0/1-720 ---------- --DINNAWGC LEQAEKGYEE WLLNEIRRLE RLDHLAEKFR ENSP00000377941/1-914 PAFMPSEGRM VSDINNAWGC LEQVEKGYEE WLLNEIRRLE RLDHLAEKFR ENSBTAP00000024301/1-892 PAFMPSEGRM VSDINNAWGC LEQAEKGYEE WLLNEIRRLE RLDHLAEKFR BACU010759/1-849 PAFMPSEGRM VSDINNAWGC LEQAEKGYEE WLLNEIRRLE RLDHLAEKFR 401 450 ENSTTRP00000011672/1-913 QKASIHEAWT DGKEAMLRQK DYETATLSEI KALLKKHEAF ESDLAAHQDR bmy_07724T0/1-720 QKASIHEAWT DGKEAMLRQK DYETATLSEI KALLKKHEAF ESDLAAHQDR ENSP00000377941/1-914 QKASIHEAWT DGKEAMLRQK DYETATLSEI KALLKKHEAF ESDLAAHQDR ENSBTAP00000024301/1-892 QKASIHEAWT DGKEAMLRQK DYETATLSEI KALLKKHEAF ESDLAAHQDR BACU010759/1-849 QKASIHEAWT DGKEAMLRQK DYETATLSEI KALLKKHEAF ESDLAAHQDR 451 500 ENSTTRP00000011672/1-913 VEQIAAIAQE LNELDYYDSP SVNARCQRIC DQWDNLGALT QKRREALERT bmy_07724T0/1-720 VEQIAAIAQE LNELDYYDSP SVNARCQKIC DQWDNLGALT QKRREALERT ENSP00000377941/1-914 VEQIAAIAQE LNELDYYDSP SVNARCQKIC DQWDNLGALT QKRREALERT ENSBTAP00000024301/1-892 VEQIAAIAQE LNELDYYDSP SVNARCQKIC DQWDNLGALT QKRREALERT BACU010759/1-849 VEQIAAIAQE LNELDYYDSP SVNARCQKIC DQWDNLGALT QKRREALERT 501 550 ENSTTRP00000011672/1-913 EKLLETIDQL YLEYAKRAAP FNNWMEGAME DLQDTFIVHT IEEIQGLTTA bmy_07724T0/1-720 EKLLETIDQL YLEYAKRAAP FNNWMEGAME DLQDTFIVHT IEEIQ----- ENSP00000377941/1-914 EKLLETIDQL YLEYAKRAAP FNNWMEGAME DLQDTFIVHT IEEIQGLTTA ENSBTAP00000024301/1-892 EKLLETIDQL YLEYAKRAAP FNNWMEGAME DLQDTFIVHT IEEIQGLTTA BACU010759/1-849 EKLLETIDQL YLEYAKRAAP FNNWMEGAME DLQDTFIVHT IEEIQGLTTA 551 600 ENSTTRP00000011672/1-913 HEQFKATLPD ADKERLAILG IHNEVSKIVQ TYHVNMAGTN PYTTITPQEI bmy_07724T0/1-720 ---------- ---------- ---------- ---------- ---------- ENSP00000377941/1-914 HEQFKATLPD ADKERLAILG IHNEVSKIVQ TYHVNMAGTN PYTTITPQEI ENSBTAP00000024301/1-892 HEQFKATLPD ADKERLAILG IHNEVSKIVQ TYHVNMAGTN PYTTITPQEI BACU010759/1-849 HEQFKATLPD ADKERLAILG IHNEVSKIVQ TYHVNMAGTN PYTTITPQEI 601 650 ENSTTRP00000011672/1-913 NGKWDHVRQL VPRRDQALME EHARQQHNER LRKQFAAQAN VIGPWIQTKM bmy_07724T0/1-720 ------VRQL VPRRDQALTE EHARQQHNER LRKQFAAQAN VIGPWIQTKM ENSP00000377941/1-914 NGKWDHVRQL VPRRDQALTE EHARQQHNER LRKQFGAQAN VIGPWIQTKM ENSBTAP00000024301/1-892 NGKWDHVRQL VPRRDQALTE EHARQQHNER LRKQFGAQAN VIGPWIQTKM BACU010759/1-849 NGKWDHVRQL VPRRDQALTE EHARQQHNER LRKQFAAQAN VIGPWIQTKM 651 700 ENSTTRP00000011672/1-913 EEIGRISIEM HGTLEDQLSH LR-YERSIVN YKPKIDQLEG DHQLIQEALI bmy_07724T0/1-720 EEIGRISIEM HGTLEDQLCH LRQYEKSIVN YKPKIDQLEG DHQLIQEALI ENSP00000377941/1-914 EEIGRISIEM HGTLEDQLSH LRQYEKSIVN YKPKIDQLEG DHQLIQEALI ENSBTAP00000024301/1-892 EEIGRISIEM HGTLEDQLNH LRQYEKSIVN YKPKIDQLEG DHQLIQEALI BACU010759/1-849 EEIGRISIEM HGTLEDQLSH LRQYEKSIVN YKPKIDQLEG DHQLIQEALI 701 750 ENSTTRP00000011672/1-913 FDNKHTNYTM EHIRVGWEQL LTTIARTINE VENQILTRDA KGISQEQMNE bmy_07724T0/1-720 FDNKHTNYTM EHIRVGWEQL LTTIARTINE VENQILTRDA KGISQEQMNE ENSP00000377941/1-914 FDNKHTNYTM EHIRVGWEQL LTTIARTINE VENQILTRDA KGISQEQMNE ENSBTAP00000024301/1-892 FDNKHTNYTM EHIRVGWEQL LTTIARTINE VENQILTRDA KGISQEQMNE BACU010759/1-849 FDNKHTNYTM EHIRVGWEQL LTTIARTINE VENQILTRDA KGISQEQMNE 751 800 ENSTTRP00000011672/1-913 FRASFNHFDR DHSGTLGPEE FKACLISLGY DIGNDPQKKT GMMDTDDFRA bmy_07724T0/1-720 FRASFNHFDR ---------- ---------- ---------- ---------- ENSP00000377941/1-914 FRASFNHFDR DHSGTLGPEE FKACLISLGY DIGNDPQKKT GMMDTDDFRA ENSBTAP00000024301/1-892 FRASFNHFDR DHSGTLGPEE FKACLISLGY DIGNDPQ--- ---------- BACU010759/1-849 FRASFNHFDR DHSGTLGPEE FKACLISLGY DIGNDPQKKT GMMDTDDFRA 801 850 ENSTTRP00000011672/1-913 CLISMGYNMG EAEFARIMSI VDPNRLGVVT FQAFIDFMSR ETADTDTADQ bmy_07724T0/1-720 ---------G EAEFARIMSI VDPNRLGVVT FQAFIDFMSR ETADTDTADQ ENSP00000377941/1-914 CLISMGYNMG EAEFARIMSI VDPNRLGVVT FQAFIDFMSR ETADTDTADQ ENSBTAP00000024301/1-892 ---------G EAEFARIMSI VDPNRLGVVT FQAFIDFMSR ETADTDTADQ BACU010759/1-849 CLISMGYNMG EAEFARIMSI VDPNRLGVVT FQAFIDFMSR ETADTDTADQ 851 900 ENSTTRP00000011672/1-913 VMASFKILAG DKNYITVDEL RRELPPDQAE YCIARMAPYT GPDAVPGALD bmy_07724T0/1-720 VMASFKILAG DKNYITVDEL RRELPPDQAE YCIARMAPYT GPDAVPGALD ENSP00000377941/1-914 VMASFKILAG DKNYITMDEL RRELPPDQAE YCIARMAPYT GPDSVPGALD ENSBTAP00000024301/1-892 VMASFKILAG DKNYITVDEL RRELPPDQAE YCIARMAPYT GPDAVPGALD BACU010759/1-849 VMASFKILAG DKNYITVDEL RRELPPDQAE YCIARMAPYT GPDAVPGALD 901 950 ENSTTRP00000011672/1-913 YMSFSTALYG ESDL bmy_07724T0/1-720 YMSFSTALYG ESDL ENSP00000377941/1-914 YMSFSTALYG ESDL ENSBTAP00000024301/1-892 YMSFSTALYG ESDL BACU010759/1-849 YMSFSTALYG ESDL