KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:52 2014 Check: 00 .. Name: ENSP00000296097/1-189 Len: 221 Check: 8767 Weight: 1.00 Name: ENSBTAP00000024305/1-174 Len: 221 Check: 6123 Weight: 1.00 Name: ENSTTRP00000011872/1-190 Len: 221 Check: 3161 Weight: 1.00 Name: bmy_01079T0/1-175 Len: 221 Check: 9536 Weight: 1.00 Name: BACU014551/1-195 Len: 221 Check: 4433 Weight: 1.00 // 1 50 ENSP00000296097/1-189 ---------- ---------- ---------M STVKEAAHRL SKSEMSLYAV ENSBTAP00000024305/1-174 ---------- ---------- ---------M AHVDEAARQL SKSGSTLYAV ENSTTRP00000011872/1-190 ---------- ---------- ---------M AHVDKAARPL SKTGSTLYAV bmy_01079T0/1-175 ---------- ---------- ---------M AHVDEAARRL SKTGSTLYAV BACU014551/1-195 MSFLSLEVHF FVASPVEVLT NASSPLTQIM AHVDEAARRL SKTGSTLYAV 51 100 ENSP00000296097/1-189 LDLKKGASPE DFKKSYSHSA LLPHPPFEYH LGRKLALRYH PDKNPGNAQA ENSBTAP00000024305/1-174 LELKKGASPE DVKKAY---- ---------- --RRLALKYH PDKNPGDAQA ENSTTRP00000011872/1-190 LELKKGASPE DVKKAYSHSS --SPHPPGYC LGRRLALKYH PDKNPGDPQA bmy_01079T0/1-175 LELKKGASPE DVKKAY---- ---------- --RRLALKYH PDKNPGDPQA BACU014551/1-195 LELKKGASPE DIKKAY---- ---------- --RRLALKYH PDKNPGDPQA 101 150 ENSP00000296097/1-189 AEIFKEINAA HAILSDSKKR KIYDQHGSLG IYLYDHFGEE GVRYYFILNS ENSBTAP00000024305/1-174 AEIFKEINTA HAVLSDPKKR KIYDRHGSLG IYIYDHFGEE GVTYYFTMNS ENSTTRP00000011872/1-190 AEIFKEINTA HSVLSDPKKR QIYDRHGSLG IYIYDHFGEE GVTYYFTLNS bmy_01079T0/1-175 AEVFKEINTA HSVLSDPKKR QIYDRHGSLG IYIYDHFGEE GVTYYFTLNS BACU014551/1-195 AEIFKEINTA HSVLSDPKKR QIYDRRGSLG IYIYDHFGEE GVTYYFTLNS 151 200 ENSP00000296097/1-189 CWFKTLVILC TLLT-CCCFC CCCCFCCGAL KPPPEQDSGR KYQQNVQSQP ENSBTAP00000024305/1-174 CWFKTLVLLC ALLT-CCCCC CCCCFCCGAL KPPPEEMANK KNASNVQHQP ENSTTRP00000011872/1-190 CWFKTLVLLC ALLTCCCCCC CCCCFCWGTL KPPPEEAAKK KYEPNVQNQP bmy_01079T0/1-175 CWFKTLVLLC ALLT-CCCCC CCCCFCCGAL KPPPEEAAKK KYEPNVQNQP BACU014551/1-195 CWFKTLVLLC ALLT-CCCCC CCCCFCCGAL KPPPEEAAKK KYEPNVQNQP 201 250 ENSP00000296097/1-189 PRSGAKCDFR --SEENSEDD F ENSBTAP00000024305/1-174 PRSGHREHFR RGEDGSSDDN - ENSTTRP00000011872/1-190 PRPGHREHFR RGEDNSSGDN Y bmy_01079T0/1-175 PRSGADPVRV PSAAQSAGLG E BACU014551/1-195 PRPG------ --ENHRQGLG -