KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:52 2014 Check: 00 .. Name: ENSP00000227868/1-501 Len: 501 Check: 3683 Weight: 1.00 Name: ENSBTAP00000024307/1-501 Len: 501 Check: 669 Weight: 1.00 Name: bmy_16663T0/1-325 Len: 501 Check: 3513 Weight: 1.00 Name: ENSTTRP00000001011/1-490 Len: 501 Check: 3680 Weight: 1.00 Name: BACU008899/1-499 Len: 501 Check: 8882 Weight: 1.00 // 1 50 ENSP00000227868/1-501 MAASWRLGCD PRLLRYLVGF PGRRSVGLVK GALGWSVSRG ANWRWFHSTQ ENSBTAP00000024307/1-501 MAASWRLGCD PRLLRCLLGF GSRRSPELVK GAARWSVGRG ASWRWFHSTQ bmy_16663T0/1-325 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001011/1-490 MAASWRLGCD QRLLR----- ------GLVK GAAVWSAGRG ASWRWFHSTQ BACU008899/1-499 MAASWRLGCD PRLLRCLLGF S--RSPGLVK GAAGRSVGRG ASWRWFHSTK 51 100 ENSP00000227868/1-501 WLRGDPIKIL MPSLSPTMEE GNIVKWLKKE GEAVSAGDAL CEIETDKAVV ENSBTAP00000024307/1-501 WLRADPIKIL MPSLSPTMEE GNIVKWLKKE GEAVSAGDAL CEIETDKAVV bmy_16663T0/1-325 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001011/1-490 WLRADPITIL MPSLSPTMEE GNIVKWLKKE GEAVSTGDAL CEIETDKAVV BACU008899/1-499 WLRADPITIL MPSLSPTMEE GNIVKWLKKE GEAVSTGDAL CEIETDKAVV 101 150 ENSP00000227868/1-501 TLDASDDGIL AKIVVEEGSK NIRLGSLIGL IVEEGEDWKH VEIPKDVGPP ENSBTAP00000024307/1-501 TLDASDDGIL AKIVVAEGSK NIRLGSLIGL LVEEGEDWKH VEIPKDTGPP bmy_16663T0/1-325 ---------- MKIT------ ---------- ---------- ---------- ENSTTRP00000001011/1-490 TLDASDDGIL AKIVVAEGSK NIRLGSLIGL LVEEGEDWKH VEIPKDIGPS BACU008899/1-499 TLDASDDGIL AKIVVAEGSK NIRLGALIGL LVEEGEDWKH VEIPKDIGPS 151 200 ENSP00000227868/1-501 PPVSKPSEPR PSPEPQISIP VKKEHIPGTL RFRLSPAARN ILEKHSLDAS ENSBTAP00000024307/1-501 PPAAKPSVPP PSAEPQIATP VKKEHPPGKV QFRLSPAARN ILEKHALDAN bmy_16663T0/1-325 ---------- ---------- ---------- RFRLSPAARN ILEKHALDAN ENSTTRP00000001011/1-490 SPASKPSVPC PSPEPQISTP VKKEHTPGKL QFRLSPAARN ILEKHALDAN BACU008899/1-499 SPASKPSVPC PSPEPQISTP VKKEHIPGKL QFRLSPAARN ILEKHGLDAN 201 250 ENSP00000227868/1-501 QGTATGPRGI FTKEDALKLV QLKQTGKITE SRPTPAPTAT PTAPSPLQAT ENSBTAP00000024307/1-501 QGTATGPRGI FTKEDALKLV QLKQTGKITE PRPTAALPTT PAAPLPPQAA bmy_16663T0/1-325 QGTATGPRGI FTKEDAVKLV QLKQMSKITE SRPTPALPTI PTASLPPRAT ENSTTRP00000001011/1-490 QGTATGPRGI FTKEDALKLV QLKQMGKITE SRPTPAPPTI PTASLPPQAT BACU008899/1-499 QGTATGPRGI FTKEDALKLV QLKQMSKITE SRPTPALPTI PTASLPPQAT 251 300 ENSP00000227868/1-501 AGPSYPRPVI PPVSTPGQPN AVGTFTEIPA SNIRRVIAKR LTESKSTVPH ENSBTAP00000024307/1-501 ATASYPRPMI PPVSTPGQPN VEGTFTEIPA SNIRRVIAKR LTESKSTIPH bmy_16663T0/1-325 ARPSYPRPMI PPVSTPGQPN VAGTFTEIPT SNIRRVIAKR LTESKRTVPH ENSTTRP00000001011/1-490 ASPSYPRPMI PPVSTPGQPN VAGTFTEIPT SNIRRVIAKR LTESKRTVPH BACU008899/1-499 ARPSYPRPMI PPVSTPGQPN VAGTFTEVPT SNIRRVIAKR LTESKRTVPH 301 350 ENSP00000227868/1-501 AYATADCDLG AVLKVRQDLV KDDIKVSVND FIIKAAAVTL KQMPDVNVSW ENSBTAP00000024307/1-501 AYATTDCDLG AVLTARQNLV RDDIKVSVND FIIKAAAVTL KQMPNVNASW bmy_16663T0/1-325 AYATTDCDLG AVLKVRQNLV RDDIKVSVND FIIKAAAVTL KQMPSVNVSW ENSTTRP00000001011/1-490 AYATTDCDLG AVLKVRQNLV RDDIKVSVND FIIKAAAVTL KQMPSVNVSW BACU008899/1-499 AYATTDCDLG AVLKVRQNLV RDDIKVSVND FIIKAAAVTL KQMPSVNVSW 351 400 ENSP00000227868/1-501 DGEGPKQLPF IDISVAVATD KGLLTPIIKD AAAKGIQEIA DSVKALSKKA ENSBTAP00000024307/1-501 DGEGAKQLPS IDISVAVATD RGLITPVIKD AAAKGLQEIA DSVKALSKKA bmy_16663T0/1-325 DGESPKQLPF IDISVAVATD KGVITPVIKD AAAKGLPEIA DSVKALSKKA ENSTTRP00000001011/1-490 DGESPKQLPF IDISVAVATD KGLITPLIKD AAAKGLPEIA ASVKALSKKA BACU008899/1-499 DGESPKQLPF IDISVAVATD RGLITPVIKD AAAKGLPEIA DSVKALSKKA 401 450 ENSP00000227868/1-501 RDGKLLPEEY QGGSFSISNL GMFGIDEFTA VINPPQACIL AVGRFRPVLK ENSBTAP00000024307/1-501 RDGKLLPEEY QGGSFSISNL GMFGIDEFTA VINPPQACIL AVGRFRPVLK bmy_16663T0/1-325 RDGKLLPEEY QGGSFSISNL GMFGIDEFTA VINPPQACIL AVGRFRPVLK ENSTTRP00000001011/1-490 RDGKLLPEEY QGGSFSISNL GMFGIDEFTA VINPPQACIL AVGRFRPVLK BACU008899/1-499 RDGKLLPEEY QGGSFSISNL GMFGINEFTA VINPPQACIL AVGRFRPVLK 451 500 ENSP00000227868/1-501 LTEDEEGNAK LQQRQLITVT MSSDSRVVDD ELATRFLKSF KANLENPIRL ENSBTAP00000024307/1-501 LTQDEEGNAQ LQQRQLITVT MSSDSRVVDD ELATRFLESF KANLENPLRL bmy_16663T0/1-325 LTRDEEGNAK LQQHQLMTVT MSSDSRVVDD ELATRFLESF KANLENPIRL ENSTTRP00000001011/1-490 LAQDEEGNAK LQQHQLITVT MSSDSRVVDD ELATRFLESF KANLENPIRL BACU008899/1-499 LTQDEEGNAK LQQHQLITVT MSSDSRVVDD ELATRFLESF KANLENPIRL 501 550 ENSP00000227868/1-501 A ENSBTAP00000024307/1-501 A bmy_16663T0/1-325 A ENSTTRP00000001011/1-490 T BACU008899/1-499 A