KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:57 2014 Check: 00 .. Name: bmy_08090T0/1-525 Len: 572 Check: 379 Weight: 1.00 Name: ENSBTAP00000024325/1-377 Len: 572 Check: 8708 Weight: 1.00 Name: ENSP00000247219/1-375 Len: 572 Check: 5500 Weight: 1.00 Name: ENSTTRP00000001910/1-376 Len: 572 Check: 6360 Weight: 1.00 Name: BACU015366/1-190 Len: 572 Check: 4147 Weight: 1.00 // 1 50 bmy_08090T0/1-525 CHGFINAASP SHLASNVKTG SIIECWSEAS TAVLKPCPLL PAQAGWEPRR ENSBTAP00000024325/1-377 ---------- ---------- ---------- ---------- ---------- ENSP00000247219/1-375 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001910/1-376 ---------- ---------- ---------- ---------- ---------- BACU015366/1-190 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_08090T0/1-525 GDLRKLSDGT YRKKIMGINQ REKNLRQRQH SQVEGNLQIC RPSCFSAVGG ENSBTAP00000024325/1-377 ---------- ---------- ---------- ---------- ---------- ENSP00000247219/1-375 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001910/1-376 ---------- ---------- ---------- ---------- ---------- BACU015366/1-190 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_08090T0/1-525 CGDSTPARRV FPSQPQLSLP CSRPVGPLLS SAGPLLSSAP RSLAQDLSPR ENSBTAP00000024325/1-377 ---------- ---------- ---------- -----MASAP HTPGQLSHSS ENSP00000247219/1-375 ---------- ---------- ---------- ---MASAPWP ERVPRLLAPR ENSTTRP00000001910/1-376 ---------- ---------- ---------- -----TASAP RLVPRQLESR BACU015366/1-190 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_08090T0/1-525 AVDRSVDCAG LAQGLPAEPW SRAPRPRPRP RLATCGRGLI NGFRAPRASS ENSBTAP00000024325/1-377 ---------- ---------- IRSGSSPHXP T--------- ---------- ENSP00000247219/1-375 ---------- ---------- -LPSYPPP-- ---------- ---------- ENSTTRP00000001910/1-376 ---------- ---------W LFPS------ ---------- ---------- BACU015366/1-190 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_08090T0/1-525 DSAAARFALA LSFDSQPPTV SPPSMEGEET YLELYLARCA AQDDLAPPRS ENSBTAP00000024325/1-377 ---------- ----SQLPTV SPPPM--EET YLELYLDQCS AQDALTPSRS ENSP00000247219/1-375 ---------- ------PPTV GLRSMEQEET YLELYLDQCA AQDGLAPPRS ENSTTRP00000001910/1-376 ---------- ----SQTPPV SPPSMEGEET FLELFLARCA TQDDLAPPRS BACU015366/1-190 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_08090T0/1-525 PLLSPIVPYD VY---TSNPE TTFNSQLEEV TVTSGNFSSV DLSFLPDELT ENSBTAP00000024325/1-377 PLLSPAVPYD VDMLTSSNPE TAFNPQLEEV TEASGSFSAV DLSFLPDELS ENSP00000247219/1-375 PLFSPVVPYD MYILNASNPD TAFNSN-PEV KETSGDFSSV DLSFLPDEVT ENSTTRP00000001910/1-376 PLLSPIVPYD VYIPNSSNPE TLFNSQLEEV TETSGNFSSV DLSFLPDELT BACU015366/1-190 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_08090T0/1-525 QENKDXTVIR SKHETEENCK TKSWQSRLPL PSQQDVGLAL NSSGGSNSHS ENSBTAP00000024325/1-377 QENKDQTVIR SKHEVEENCK TQSRQIRLPL PSQLDAGLAL NSSSGSGSHS ENSP00000247219/1-375 QENKDQPVI- SKHETEENSE SQSPQSRLPS PSEQDVGLGL NSSSLSNSHS ENSTTRP00000001910/1-376 QENKEQTVIR SKHETEENCK TKSWQSRLPL PSQQDVDLAL NSSSGSNSHS BACU015366/1-190 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_08090T0/1-525 HLHP---GDA DSAQPSPEKP H--SLPLASI TPMTPVTPVS ECSGIVPQLQ ENSBTAP00000024325/1-377 HLHP---ADG NSAQPSPEKP H--SMPLASI TPMTPMAPIS ECSGIVPQLQ ENSP00000247219/1-375 QLHP---GDT DSVQPSPEKP NSDSLSLASI TPMTPMTPIS ECCGIVPQLQ ENSTTRP00000001910/1-376 HLHPGDAGDA DSAQPSPEKP H--SLPLASI TPMTPVTPVS GCSGIVPQLQ BACU015366/1-190 ---------- ---------- ---------- --MTPVTPVS ECSGIVPQLQ 401 450 bmy_08090T0/1-525 ---------- ---------- ---------- FAAVIMRIRE PRTTALIFSS ENSBTAP00000024325/1-377 NIVSTVNLAC KLDLKKIALH AKNAEYNPKR FAAVIMRIRE PRTTALIFSS ENSP00000247219/1-375 NIVSTVNLAC KLDLKKIALH AKNAEYNPKR FAAVIMRIRE PRTTALIFSS ENSTTRP00000001910/1-376 NIVSTVNLAC KLDLKKIALH AKNAEYNPKR FAAVIMRIRE PRTTALIFSS BACU015366/1-190 NIVSTVNLAC KLDLKKIALH AKNAEYNPKR FAAVIMRIRE PRTTALIFSS 451 500 bmy_08090T0/1-525 GKMVCTGAKS EEQSRLAARK YARVVQKLGF PARFLDFKIQ NMVGSCDVRF ENSBTAP00000024325/1-377 GKMVCTGAKS EEQSRLAARK YARVVQKLGF PARFLDFTIQ NMVASCDVRF ENSP00000247219/1-375 GKMVCTGAKS EEQSRLAARK YARVVQKLGF PARFLDFKIQ NMVGSCDVRF ENSTTRP00000001910/1-376 GKMVCTGARS EEQSRLAARK YARVVQKLGF PARFLDFKIQ NMVGSCDVRF BACU015366/1-190 GKMVCTGAKS EEQSRLAARK YARVVQKLGF PARFLDFKIQ NMVGSCDVRF 501 550 bmy_08090T0/1-525 PIRLEGLVLT HQQFSSYEPE LFPGLIYRMV KPRIVLLIFV SGKVVLTVSC ENSBTAP00000024325/1-377 PISLEGLVLT HQQFSSYEPE LFPGLIYRMV KPRIVLLIFV SGKVVLTGAK ENSP00000247219/1-375 PIRLEGLVLT HQQFSSYEPE LFPGLIYRMV KPRIVLLIFV SGKVVLTGAK ENSTTRP00000001910/1-376 PIRLEGLVLS HQQFSSYEPE LFPGLIYRMV KPRIVLLIFV SGKVVLTGAK BACU015366/1-190 PIRLEGLVLT HQQFSSYEPE LFPGLIYRMV KPRIVLLIFV SGKVVLTGAK 551 600 bmy_08090T0/1-525 TRMNTKFIWD EPN------- -- ENSBTAP00000024325/1-377 KRSDIYEAFE NIYPILKGFK KA ENSP00000247219/1-375 ERSEIYEAFE NIYPILKGFK KA ENSTTRP00000001910/1-376 ERSEIYEAFE NIYPILKGFK KT BACU015366/1-190 ERSEIYEAFE NIYPILKGFK KT