KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:59 2014 Check: 00 .. Name: ENSP00000365413/1-691 Len: 701 Check: 8306 Weight: 1.00 Name: bmy_10779T0/1-603 Len: 701 Check: 7939 Weight: 1.00 Name: ENSBTAP00000024328/1-697 Len: 701 Check: 4245 Weight: 1.00 Name: BACU006689/1-585 Len: 701 Check: 1172 Weight: 1.00 Name: ENSTTRP00000004747/1-688 Len: 701 Check: 6904 Weight: 1.00 // 1 50 ENSP00000365413/1-691 ------MELR STAAPRAEGY SNVGFQNEEN FLENENTSGN -NSIRSRAVQ bmy_10779T0/1-603 ---------- -MVALTAEGC SNTGFQSDED CFENQNTSGN DNSLRSRIVQ ENSBTAP00000024328/1-697 MSSKISVELQ RVAALPAQGC SNTGFQNDED GFENQNPSGN DHSLRNRVVQ BACU006689/1-585 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004747/1-688 ------LELQ RMAALTAEGC SNTGFQYDDD CFENQNTSGN DNSLRSRVVQ 51 100 ENSP00000365413/1-691 SREHTNTKQD EEQVTVEQDS PRNREHMEDD DEEMQQKGCL ERRYDTVCGF bmy_10779T0/1-603 NREQEKGKRG KSKSPLSRIL QE-RMKMRRM IKRRIKKGAW K------GSV ENSBTAP00000024328/1-697 NREHENGKQV EEHITIGQDS LR-KDEEEED DQETHRKGCL ERMCGRMSDF BACU006689/1-585 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004747/1-688 NREQENGKQG EEQVTIEQDS P--RNDEDED DQETHQKGXX XXXXXXXXXX 101 150 ENSP00000365413/1-691 CRKHKTTLRH IIWGILLAGY LVMVISACVL NFHRALPLFV ITVAAIFFVV bmy_10779T0/1-603 VQEHKTTVKY IIWGILIASY LALVIAACVL NFRRALPLFV ITVVAIFFVI ENSBTAP00000024328/1-697 CREHKTTLRY IIWGILIAGY LALVIAACVM NFHRALPLFV ITVVAIFFVV BACU006689/1-585 ---------- MTWGILIAGY LALVIAACVL NFNRALPLFV ITVLAIFFVI ENSTTRP00000004747/1-688 XXXXXXXXXX XXXXXXXXXH LALVIAACVL NFHRALPLFV ITVVAIFFVI 151 200 ENSP00000365413/1-691 WDHLMAKYEH RIDEMLSPGR RLLNSHWFWL KWVIWSSLVL AVIFWLAFDT bmy_10779T0/1-603 WDHFMARYES QIAQFPSPGQ RLLDSHWFWL KWVIWACLIL GVIFWLVCDT ENSBTAP00000024328/1-697 WDHLMAKYES QIARFLSPGQ RLLDSHWFWL KWVIWGCLIL GVILWLVFDT BACU006689/1-585 WDHFMAKYES QIAQFLSPGQ RLLDSHWFWL KWVIWGCLIL GVIFWLVFDT ENSTTRP00000004747/1-688 WDHFMAKYES QIAQFLSPGQ RLLDSHWFWL KWVIWGCLIL GVIFWLVFDT 201 250 ENSP00000365413/1-691 AKLGQQQLVS FGGLIMYIVL LFLFSKYPTR VYWRPVLWGI GLQFLLGLLI bmy_10779T0/1-603 TKLGQQQLVS FGGLIMYIIL TFLFSKHPTK VYWRPVFWGI GLQFLLGLLI ENSBTAP00000024328/1-697 AKLGQQQLVS FGGLIIYTSL TFLFSKHPTK VYWRPVFWGI GLQFLLGLLI BACU006689/1-585 AKLGQQQLVS FGGLIMYIIL TFLFSKHPTK VYWRPVFWGI GLQFLLGLLI ENSTTRP00000004747/1-688 AKLGQQQLVS FGGLIMYITL TFLFSKHPTK VYWRPVFWGV GLQFLLGLLI 251 300 ENSP00000365413/1-691 LRTDPGFIAF DWLGRQVQTF LEYTDAGASF VFGEKYKDHF FAFKVLPIVV bmy_10779T0/1-603 LRTETGFMAF DWLWKQVQTF LEYTDAGASF VFGEKYKDHF FAFKVLPIVV ENSBTAP00000024328/1-697 LRTEPGFMAF DWLGKQVQTF LGYSDAGASF VFGEKYTDHF FAFKVLPIVI BACU006689/1-585 LRTEPGFMAF DWLGKQVQTF LEYTNAGASF VFGEKYEDHF FAFKVLPIVV ENSTTRP00000004747/1-688 LRTEPGFMAF DWLGKQVQTF LEYTNAGASF VFGEKYEDHF FAFKVLPIVV 301 350 ENSP00000365413/1-691 FFSTVMSMLY YLGLMQWIIR K---VGWIML VTTGSSPIES VVASGNIFVG bmy_10779T0/1-603 FFSTVMSMLH YLGLMQWIIK KHSCVGWVML VTVGTSPVES VVASASIFVG ENSBTAP00000024328/1-697 FFSTVMSMLY YLGLMQWIIR K---VGWVML VTMGTSPVES VVASGNIFIG BACU006689/1-585 FFSTVMSMLY YLGLMQWIIK K---VGWVML VTMGTSPVES VVASGNIFVG ENSTTRP00000004747/1-688 FFSTVMSMLY YLGLMQWIIK K---VGWVML VTMGTSPVES VVASGNIFVG 351 400 ENSP00000365413/1-691 QTESPLLVRP YLPYITKSEL HAIMTAGFST IAGSVLGAYI SFGVPSSHLL bmy_10779T0/1-603 QTESPLLLQP YLPYVTKSEL HAIMTTGFSA IAGSVLGAYI SFGVSSSHLL ENSBTAP00000024328/1-697 QTESPLLVRP YLPYVTKSEL HAIMTAGFST IAGSVLGAYI SFGVSSSHLL BACU006689/1-585 QTESPLLIRP YLPYVTKSEL HAVMAAGFST IAGSVLGAYI SFGVSSSHLL ENSTTRP00000004747/1-688 QTESPLLIRP YLPCVTKSEL HAVMTAGFST IAGSVLGAYI SFGVSSSHLL 401 450 ENSP00000365413/1-691 TASVMSAPAS LAAAKLFWPE TEKPKITLKN AMKMESGDSG NLLEAATQGA bmy_10779T0/1-603 TASVMSTPAA LA-------- ---------- ---------- --------GA ENSBTAP00000024328/1-697 TASVMSAPAA LAISKLFWPE TETPKINLKN AMKMESGDSR NLLEAATQGA BACU006689/1-585 TASVMSAPAA LAISKLFWPE TETPKITLKK AMKMENGDSK NLLEAATQGA ENSTTRP00000004747/1-688 TASVMSAPAA LAISKLFWPE TETPKITLKN AMKMENGDSK NLLEAAAQGA 451 500 ENSP00000365413/1-691 SSSISLVANI AVNLIAFLAL LSFMNSALSW FGNMFDYPQL SFELICSYIF bmy_10779T0/1-603 SSSISLVANI AVNLIAFLAL LSFVNSALSW FGNMFDYPQL SFEVICSYIF ENSBTAP00000024328/1-697 SSSISLVANI AVNLIAFLAL LSFMNSALSW LGNMFDYPQL SFEVICSYVF BACU006689/1-585 SSSIPLVANI AVNLIAFLAL LSFVNSALSW FGNMFDYPQL SFEVICSYIF ENSTTRP00000004747/1-688 SSSIPLVANI AANLIAFLAL LSFVNSALSW FGNMFDYPQL SFEVICSYIF 501 550 ENSP00000365413/1-691 MPFSFMMGVE WQDSFMVARL IGYKTFFNEF VAYEHLSKWI HLRKEGGPKF bmy_10779T0/1-603 MPFSFMIGVD WQDSFMVAKL IGYKTFFNEF VAYQKLSKLI HLRQEXGPN- ENSBTAP00000024328/1-697 MPFAFMMGVD WQDSFMVAKL IGYKTFFNEF VAYQQLSKLI SLRQVGGPKF BACU006689/1-585 MPFAFMMGVD WQDSFMVAKL IGYKTFFNEF VAYEKLSKLI HLRQEGGPKF ENSTTRP00000004747/1-688 MPFSFMMGVD WQDSFMVARL IGYKTFFNEF VAYQKLSELI HLRQESGPKF 551 600 ENSP00000365413/1-691 VNGVQQYISI RSEIIATYAL CGFANIGSLG IVIGGLTSMA PSRKRDIASG bmy_10779T0/1-603 -------LWM VCSNICRFVL RQLPLMLSVA LPISHLPA-- ---------- ENSBTAP00000024328/1-697 VDGVQQYMSM RSEAISTYAL CGFANFGSLG IVIGGLTSMA PSRKRDITAG BACU006689/1-585 VDGVQQYMSI RAETIATYAL CGFANFGSLG IVIGGLTSIA PSRKRDIAAG ENSTTRP00000004747/1-688 VDGVQQYMSI RAETIATYAL CGFANFGSLG IVIGGLTSIA PSRKHDIAAG 601 650 ENSP00000365413/1-691 AVRALIAGTV ACFMTACIAG ILSSTPVDIN CHHVLENAFN STFPGNTTKV bmy_10779T0/1-603 ---------- ---------- ---STSVDIN CHHVLENAFN SSSVRNTTNA ENSBTAP00000024328/1-697 AMRALIAGTI ACFLTACIAG MLTNTPVDIN CHHILENAFN SGLVRNTTNV BACU006689/1-585 AMRALIAGTI ACFMTACIAG ILSSTPVD-S CHHILENAFN SSLVRNTTDV ENSTTRP00000004747/1-688 AVRALIAGTV ACFMTACIAG MLTSTPVDSN CHHILENAFN SSSVRNTTDV 651 700 ENSP00000365413/1-691 IACCQSLLSS TVAKGPGEVI PGGNHSLYSL KGCCTLLNPS TFNCNGISNT bmy_10779T0/1-603 VSCCQSLLSS TVARGPGEVI PEGNHSLY-L KDCCNLLNPP TLNCSWVPNA ENSBTAP00000024328/1-697 VSCCQGLLSS AVVKGPGEVI PTGNHSLYSL KNCCNLLNTP TLNCSWIPNV BACU006689/1-585 VSCCQSLLNS TVANGPGEVI PEGNHSLYSL KHCCNLLNPP TLNCSWIP-- ENSTTRP00000004747/1-688 VSCCQSLLNS TVVNGPGEVI PAGNHSLYSL KHCCNLLNPP TLNCSWIP-- 701 750 ENSP00000365413/1-691 F bmy_10779T0/1-603 F ENSBTAP00000024328/1-697 L BACU006689/1-585 F ENSTTRP00000004747/1-688 F