KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:00 2014 Check: 00 .. Name: ENSP00000387292/1-271 Len: 271 Check: 5351 Weight: 1.00 Name: ENSBTAP00000024342/1-271 Len: 271 Check: 8766 Weight: 1.00 Name: bmy_21863T0/1-183 Len: 271 Check: 7359 Weight: 1.00 Name: ENSTTRP00000008509/1-271 Len: 271 Check: 7113 Weight: 1.00 Name: BACU005909/1-271 Len: 271 Check: 8813 Weight: 1.00 // 1 50 ENSP00000387292/1-271 MTAWILLPVS LSAFSITGIW TVYAMAVMNH HVCPVENWSY NESCPPDPAE ENSBTAP00000024342/1-271 MTAWILLPVS LSAFSITGLW TVYAMAVMNH HVCPVENWSY NESCSPDPTE bmy_21863T0/1-183 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008509/1-271 MTAWILLPVS LSAFSITGLW TVYAMAVMNH HVCPVENWSY NESCSPDPTE BACU005909/1-271 MTAWILLPVS LSAFSITGLW TVYAMAVMNH HVCPVENWSY NESCSPDPTE 51 100 ENSP00000387292/1-271 QGGPKTCCTL DDVPLISKCG SYPPESCLFS LIGNMGAFMV ALICLLRYGQ ENSBTAP00000024342/1-271 QGGPKTCCTL DDIPLISKCG SYPPESCLFS LIGNLGAFMV ALICLLRYGQ bmy_21863T0/1-183 ---------- ---------- ---------- --------MV ALICLLRYGQ ENSTTRP00000008509/1-271 QGGPKTCCTL DDVPLISKCG TYPPESCLFS LIGNVGAFMV ALICLLRYGQ BACU005909/1-271 QGGPKTCCTL DDVPLISKCG TYPPESCLFS LIGNVGAFMV ALICLLRYGQ 101 150 ENSP00000387292/1-271 LLEQSRHSWV NTTALITGCT NAAGLLVVGN FQVDHARSLH YVGAGVAFPA ENSBTAP00000024342/1-271 LLEQSRHSWV NTTTLITGCT NAAGLVVVGN FQVDHAKSLH YVGTGVAFTA bmy_21863T0/1-183 LLEQSRHSWV NTTTLITGCT NAAGLVVVGN FQVDHAKSLH YVGTGVAFTA ENSTTRP00000008509/1-271 LLEQSRHSWV NTTTLITGCT NAAGLVVVGN FQVDHAKSLH YVGTGVAFTA BACU005909/1-271 LLEQSRHSWV NTTTLITGCT NAAGLVVVGN FQVDHAKSLH YVGTGVAFTA 151 200 ENSP00000387292/1-271 GLLFVCLHCA LSYQGATAPL DLAVAYLRSV LAVIAFITLV LSGVFFVHES ENSBTAP00000024342/1-271 GLLFVCLHCA LSYHGATAPQ DLAVAYLRIV LATIAFVTLI LSGVFFIHES bmy_21863T0/1-183 GLLFVCLHCA LSYHGATAPQ DLAVAYLRIV LAAIAFVSLI LSGVFFIHES ENSTTRP00000008509/1-271 GLLFVCLHCA LSYHGAAAPP DLAVAYLRIV LAAIAFVSLI LSGVFFIHES BACU005909/1-271 GLLFVCLHCA LSYHGATAPQ DLAVAYLRIV LAAIAFVSLI LSGVFFIHES 201 250 ENSP00000387292/1-271 SQLQHGAALC EWVCVIDILI FYGTFSYEFG AVSSDTLVAA LQPTPGRACK ENSBTAP00000024342/1-271 SQLQHGAALC EWVFVIDILI FYGTFSYEFG AVSSDTLVAA LQPTPGRACK bmy_21863T0/1-183 SQLQHGAALC EWVFVIDILV FYGTFSYEFG AVSSETLVAA LQPTPGRACK ENSTTRP00000008509/1-271 SQLQHGAALC EWVFVIDILI FYGTFSYEFG AVSSETLVAT LQPAPGRACK BACU005909/1-271 SQLQHGAALC EWVFVIDILV FYGTFSYEFG AVSSETLVAT LQPAPGRACK 251 300 ENSP00000387292/1-271 SSGSSSTSTH LNCAPESIAM I ENSBTAP00000024342/1-271 SSGSSSTSTH LNCSPESVAM I bmy_21863T0/1-183 SSGSSSTSTH LNCAPESVAM I ENSTTRP00000008509/1-271 SSGSSSTSTH LNCAPESVAM I BACU005909/1-271 SSGSSSTSTH LNCAPESVAM I