KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:01 2014 Check: 00 .. Name: ENSTTRP00000012541/1-767 Len: 920 Check: 262 Weight: 1.00 Name: bmy_15004T0/1-920 Len: 920 Check: 8643 Weight: 1.00 Name: BACU014869/1-753 Len: 920 Check: 5468 Weight: 1.00 Name: ENSP00000338844/1-767 Len: 920 Check: 4790 Weight: 1.00 Name: ENSBTAP00000024348/1-767 Len: 920 Check: 8166 Weight: 1.00 // 1 50 ENSTTRP00000012541/1-767 ---------- ---------- ---------- ---------- ---------- bmy_15004T0/1-920 MRPHAQGSRS LSLAPFCAPT PPSGQLRFPP QGVPPSSGAT RQSSRFPSQP BACU014869/1-753 ---------- ---------- ---------- ---------- ---------- ENSP00000338844/1-767 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024348/1-767 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000012541/1-767 ---------- ---------- ---------- ---------- ---------- bmy_15004T0/1-920 RLSCPVPRWR RSLSKCLASA RPPGRRSLIG QRRRRGVTYS ALTNRLRAEL BACU014869/1-753 ---------- ---------- ---------- ---------- ---------- ENSP00000338844/1-767 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024348/1-767 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000012541/1-767 ---------- -----MATYL EFIQQNEERD GVRFSWNVWP SSRLEATRMV bmy_15004T0/1-920 DLAVGTGARV LQRWTMATYL EFIQQNEERD GVRFSWNVWP SSRLEATRMV BACU014869/1-753 ---------- ---------- ---------- ---------- --------MV ENSP00000338844/1-767 ---------- -----MATYL EFIQQNEERD GVRFSWNVWP SSRLEATRMV ENSBTAP00000024348/1-767 ---------- -----MATYL EFIQQNEERD GVRFSWNVWP SSRLEATRMV 151 200 ENSTTRP00000012541/1-767 VPLACILTPL KERPDLPPVQ YEPVLCSRPT CKAILNPLCQ VDYRAKLWAC bmy_15004T0/1-920 VPLACILTPL KERPDLPPVQ YEPVLCSRPT CKAILNPLCQ VDYRAKLWAC BACU014869/1-753 VPLACILTPL KERPDLPPVQ YEPVLCSRPT CKAILNPLCQ VDYRAKLWAC ENSP00000338844/1-767 VPLACLLTPL KERPDLPPVQ YEPVLCSRPT CKAVLNPLCQ VDYRAKLWAC ENSBTAP00000024348/1-767 VPLACLLTPL KERPDLPPVQ YEPVLCSRPT CKAILNPLCQ VDYRAKLWAC 201 250 ENSTTRP00000012541/1-767 NFCFQRNQFP PAYAGISEVN QPAELMPQFS TVEYVIQRGA QSPLIFLYVV bmy_15004T0/1-920 NFCFQRNQFP PAYAGISEVN QPAELMPQFS TVEYVIQRGA QSPLIFLYVV BACU014869/1-753 NFCFQRNQFP PAYAGISEVN QPAELMPQFS TVEYVIQRGA QSPLIFLYVV ENSP00000338844/1-767 NFCFQRNQFP PAYGGISEVN QPAELMPQFS TIEYVIQRGA QSPLIFLYVV ENSBTAP00000024348/1-767 NFCFQRNQFP PAYAGISEVN QPAELMPQFS TIEYVIQRGA PSPLIFLYVV 251 300 ENSTTRP00000012541/1-767 DTCLEEDDLQ ALKESLQMSL SLLPPDALVG LITFGRMVQV HELSCEGISK bmy_15004T0/1-920 DTCLEEDDLQ ALKESLQMSL SLLPPDALVG LITFGRMVQV HELSCEGISK BACU014869/1-753 DTCLEEDDLQ ALKESLQMSL SLLPPDAMVG LITFGRMVQV HELSCEGISK ENSP00000338844/1-767 DTCLEEDDLQ ALKESLQMSL SLLPPDALVG LITFGRMVQV HELSCEGISK ENSBTAP00000024348/1-767 DTCLEDDDLQ ALKESLQMSL SLLPPDALVG LITFGRMVQV HELSCEGISK 301 350 ENSTTRP00000012541/1-767 SYVFRGTKDL TAKQIQDMLG LTKPAVPVHP ARPAQPQEHP SISSRFLQPI bmy_15004T0/1-920 SYVFRGTKDL TAKQIQDMLG LTKPAVPVHP ARPAQPQEHL SISSRFLQPI BACU014869/1-753 SYVFRGTKDL TAKQIQDMLG LTKPAMPVHP AHPAQPQEHP SISSRFLQPI ENSP00000338844/1-767 SYVFRGTKDL TAKQIQDMLG LTKPAMPMQQ ARPAQPQEHP FASSRFLQPV ENSBTAP00000024348/1-767 SYVFRGTKDL TAKQIQDMLG LTKPAMPVQP MRPAQPQERP SVSSRFLQPI 351 400 ENSTTRP00000012541/1-767 HKIDMNLTDL LGELQRDPWP VPQGKRPLRS TGVALSIAVG LLEGTFPNTG bmy_15004T0/1-920 HKIDMNLTDL LGELQRDPWP VPQGKRPLRS TGVALSIAVG LLEGTFPNTG BACU014869/1-753 HKIDMNLTDL LGELQRDPWP VPQGKRPLRS TGVALSIAVG LLEGTFPNTG ENSP00000338844/1-767 HKIDMNLTDL LGELQRDPWP VTQGKRPLRS TGVALSIAVG LLEGTFPNTG ENSBTAP00000024348/1-767 HKIDMNLTDL LGELQRDPWP VPQGKRPLRS TGVALSIAVG LLEGTFPNTG 401 450 ENSTTRP00000012541/1-767 ARIMLFIGGP PTQGPGMVVG DELKVPIRSW HDIEKDNARF MKKATKHYEM bmy_15004T0/1-920 ARIMLFIGGP PTQGPGMVVG DELKVPIRSW HDIEKDNARF MKKATKHYEM BACU014869/1-753 ARIMLFVGGP PTQGPGMVVG DELKVPIRSW HDIEKDNARF MKKATKHYEM ENSP00000338844/1-767 ARIMLFTGGP PTQGPGMVVG DELKIPIRSW HDIEKDNARF MKKATKHYEM ENSBTAP00000024348/1-767 ARIMLFTGGP PTQGPGMVVG DELKVPIRSW HDIEKDNARF MKKATKHYEM 451 500 ENSTTRP00000012541/1-767 LANRAAANGH CVDIYACALD QTGLLEMKCC TNLTG----- ---------- bmy_15004T0/1-920 LANRAAANGH CVDIYACALD QTGLLEMKCC TNLTGYVDSE PLGKVRVLIL BACU014869/1-753 LANRAAANGH CVDIYACALD QTGLLEMKCC TNLTGYVDSE LLGKVRVLIL ENSP00000338844/1-767 LANRTAANGH CIDIYACALD QTGLLEMKCC ANLTG----- ---------- ENSBTAP00000024348/1-767 LANRTAANGH CIDIYACALD QTGLLEMKCC PNLTG----- ---------- 501 550 ENSTTRP00000012541/1-767 ----GHMVMG DSFNTSLFKQ TFQRIFSKDF NGNFRMAFGA TLEVKTSREL bmy_15004T0/1-920 RNETGHMVMG DSFNTSLFKQ TFQRIFSKDF NGNFRMAFGA TLEVKTSREL BACU014869/1-753 RNETGHMVMG DSFNTSLFKQ TFQRIFSKDF NGNFRMAFGA TLEVKTSREL ENSP00000338844/1-767 ----GYMVMG DSFNTSLFKQ TFQRIFTKDF NGDFRMAFGA TLDVKTSREL ENSBTAP00000024348/1-767 ----GYMVMG DSFNTSLFKQ TFQRIFSKDF NGNFRMAFGA TLEVKTSREL 551 600 ENSTTRP00000012541/1-767 KVAGAIGPCV SLNVKGPCVS ENELGVGGTS QWKICGLDPT STLGIYFEVV bmy_15004T0/1-920 KVAGAIGPCV SLNVKGPCVS ENELGVGGTS QWKICGLDPT STLGIYFEVV BACU014869/1-753 KVAGAIGPCV SLNVKGPCVS ENELGVGGTS QWKICGLDPT STLGIYFEVV ENSP00000338844/1-767 KIAGAIGPCV SLNVKGPCVS ENELGVGGTS QWKICGLDPT STLGIYFEVV ENSBTAP00000024348/1-767 KVAGAIGPCV SLNVKGPCVS ENELGVGGTS QWKICGLDPT TTLGIYFEVV 601 650 ENSTTRP00000012541/1-767 NQHNAPIPQG GRGAIQFVTH YQHSSTQRRI RVTTIAR--- ---------- bmy_15004T0/1-920 NQHNAPIPQG GRGAIQFVTH YQHSSTQRRI RVTTIARXAG SRASPTCTRS BACU014869/1-753 NQHNAPIPQG GRGAIQFVTH YQHSSTQRRI RATTIAR--- ---------- ENSP00000338844/1-767 NQHNTPIPQG GRGAIQFVTH YQHSSTQRRI RVTTIAR--- ---------- ENSBTAP00000024348/1-767 NQHNAPIPQG GRGAIQFVTH YQHSSTQRRI RVTTVAR--- ---------- 651 700 ENSTTRP00000012541/1-767 ------XXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15004T0/1-920 THSGMVSWAD AQSQLKHIEA AFDQEAAAVL MARLGVFRAE SEEGPDVLRW BACU014869/1-753 ------NWAD AQSQLKHIEA AFDQEAAAVL MARLGVFRAE SEEGPDVLRW ENSP00000338844/1-767 ------NWAD VQSQLRHIEA AFDQEAAAVL MARLGVFRAE SEEGPDVLRW ENSBTAP00000024348/1-767 ------NWAD VQSQLKHIEA AFDQEAAAVL MARLGVFRAE TEEGPDVLRW 701 750 ENSTTRP00000012541/1-767 XXXXXXXXCQ KFGQYTKEDP ASFRLSDSFS LYPQFMFHLR RSPFLQVFNN bmy_15004T0/1-920 LDRQLIRLCQ KFGQYTKEDP SSFRLSDSFS LYPQFMFHLR RSPFLQVFNN BACU014869/1-753 LDRQLIRLCQ KFGQYTKEDP SSFRLSDSFS LYPQFMFHLR RSPFLQVFNN ENSP00000338844/1-767 LDRQLIRLCQ KFGQYNKEDP TSFRLSDSFS LYPQFMFHLR RSPFLQVFNN ENSBTAP00000024348/1-767 LDRQLIRLCQ KFGQYNKEDP MSFRLSDSFS LYPQFMFHLR RSPFLQVFNN 751 800 ENSTTRP00000012541/1-767 SPDESSYYRH HFARQDLTQS LIMIQPILYS YSFHGPPEPV LLDSSSILAD bmy_15004T0/1-920 SPDESSYYRH HFARQDLTQS LIMIQPILYS YSFHGPPEPV LLDSSSILAD BACU014869/1-753 SPDESSYYRH HFARQDLTQS LIMIQPILYS YSFHGPPEPV LLDSSSILAD ENSP00000338844/1-767 SPDESSYYRH HFARQDLTQS LIMIQPILYS YSFHGPPEPV LLDSSSILAD ENSBTAP00000024348/1-767 SPDESSYYRH HFARQDLTQS LIMIQPILYS YSFHGPPEPV LLDSSSILAD 801 850 ENSTTRP00000012541/1-767 RILLMDTFFQ IVIYLGETIA QWQKAGYQDM PEYENFKHLL QAPLDDAQEI bmy_15004T0/1-920 RILLMDTFFQ IVIYLGETIA QWQKAGYQDM PEYENFKHLL QAPLDDAQEI BACU014869/1-753 RILLMDTFFQ IVIYLGETIA QWQKAGYQDM PEYENFKHLL QAPLDDAQEI ENSP00000338844/1-767 RILLMDTFFQ IVIYLGETIA QWRKAGYQDM PEYENFKHLL QAPLDDAQEI ENSBTAP00000024348/1-767 RILLMDTFFQ IVIYLGETIA QWRKAGYQDM PEYENFKHLL QAPLDDAQEI 851 900 ENSTTRP00000012541/1-767 LHTRFPMPRY INTEHGGSQA RFLLSKVNPS QTHNNLYAWG QETGAPILTD bmy_15004T0/1-920 LHARFPMPRY INTEHGGSQA RFLLSKVNPS QTHNNLYAWG QETGAPILTD BACU014869/1-753 LHARFPMPRY VSTEHGGSQA RFLLSKVNPS QTHNNLYAWG QETGAPILTD ENSP00000338844/1-767 LQARFPMPRY INTEHGGSQA RFLLSKVNPS QTHNNLYAWG QETGAPILTD ENSBTAP00000024348/1-767 LQARFPMPRY IHTEHGGSQA RFLLSKVNPS QTHNNLYAWG QETGAPILTD 901 950 ENSTTRP00000012541/1-767 DVSLQVFMDH LKKLAVSSAC bmy_15004T0/1-920 DVSLQVFMDH LKKLAVSSAC BACU014869/1-753 DVSLQVFMDH LKKLAVSSAC ENSP00000338844/1-767 DVSLQVFMDH LKKLAVSSAC ENSBTAP00000024348/1-767 DVSLQVFMDH LKKLAVSSAC