KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:04 2014 Check: 00 .. Name: ENSP00000293778/1-273 Len: 306 Check: 7083 Weight: 1.00 Name: ENSBTAP00000024371/1-252 Len: 306 Check: 5016 Weight: 1.00 Name: ENSTTRP00000007211/1-260 Len: 306 Check: 7093 Weight: 1.00 Name: bmy_08654T0/1-279 Len: 306 Check: 1606 Weight: 1.00 Name: BACU019332/1-253 Len: 306 Check: 9482 Weight: 1.00 // 1 50 ENSP00000293778/1-273 ---------- ---------- ------MSGS QSEVAPSPQS PRSPEMGRDL ENSBTAP00000024371/1-252 ---------- ---------- ---------- --------MM -----LGRTS ENSTTRP00000007211/1-260 ---------- ---------- ------TSGS QSEA--PEMM -----LSWEP bmy_08654T0/1-279 MHQNLRRGGR RKRKPLRNRL DVRLRSTSGS QTGRGGPEMM -----LGWEL BACU019332/1-253 ---------- ---------- ---------- ------PEMM -----LGWEL 51 100 ENSP00000293778/1-273 RPGSRVLLLL LLLLLVYLTQ PGNGNEGSVT GSCYCGKRIS SDSPPSVQFM ENSBTAP00000024371/1-252 R------LLL VLLFIAYATT SGNGNEGSKV GSCPCDHTVS SHSPPNENIM ENSTTRP00000007211/1-260 G-------LL LLLFLLCHTP PGDGNEGSIA GSCPCDIRIS SHSPPNDHIM bmy_08654T0/1-279 R------FLL LLLFLACHTP PGDGNEGSIA GSCPCDRRIS SHSPPNDQYM BACU019332/1-253 R------FLL LLLFLACHTP PGDGNEGSIA GSCPCDTRIS SHSPPNDQYM 101 150 ENSP00000293778/1-273 NRLRKHLRAY HRCLYYTRFQ LLSWSVCGGN KDPWVQELMS CLDLKECGHA ENSBTAP00000024371/1-252 RHLRKYLKAY QRCFSYVRFQ LPLKNVCGGS TDGWVQELMH CFDSGECGHA ENSTTRP00000007211/1-260 GHLRKYLKVY QRCSSYVRFQ LPSRSVCGGS SDRWVQELMR CFDREECGRA bmy_08654T0/1-279 GHLRKYLKVY QRCSSYVRFQ LPLGSVCGGS SDRWVQELMR CFDREECGRA BACU019332/1-253 GHLRKYLKVY QRCSSYVRFQ LPLVSVCGGS SDRWVQELMR CFDREECGRA 151 200 ENSP00000293778/1-273 YSGIVAHQKH LLPTSPPISQ ASEGASSDIH TPAQMLL-ST LQSTQRPTLP ENSBTAP00000024371/1-252 QPRVV----D APLHRTQLPE PTEAAPSDTA TTSQTYLPST LQRTQQPTPL ENSTTRP00000007211/1-260 HARSVARQGH VPPHSTQVPE PTEKTPSATG TPSQKYLPST LQPTQQPIPP bmy_08654T0/1-279 HARSVARQGH VPPRSTQVPE PTEKTPSATG TPAQKYLPST LQPSQQPTPP BACU019332/1-253 HARSVAREGH VPPRSTQVPE PTEKTPSATG TPAQKYLPPT LQHSQQPTPP 201 250 ENSP00000293778/1-273 VGSLSSDKEL TRPNETTIHT AGHSLAAGPE AGENQKQPEK NAGPTARTSA ENSBTAP00000024371/1-252 EGALSLDSKL IPTHETTTYT SGHSLGAEPE AKENQKQLKE NRGPQAGTSA ENSTTRP00000007211/1-260 EGATLLDQKL IHTNETTTYT LGHRLGARPG ARGNQGQLGE NVGPAAGTSA bmy_08654T0/1-279 EGAPSLDKKL IHPNETTTYT SDHRLGARPG ARGNQKQLGE NVGPAAGTSA BACU019332/1-253 EGAPSLDKNL IHPNETTTYT SGHRLGARPG AMGNQKQLGE NVGPAAGTAA 251 300 ENSP00000293778/1-273 TVPVLCLLAI IFILTAALSY VLCKRRRGQS PQSSP-DLPV HYIPVAPDSN ENSBTAP00000024371/1-252 TVPVLSLLAI VFILAGVLLY VVCKRRKNQL LQHPP-DLAA SLYTCSRRTR ENSTTRP00000007211/1-260 MVPVLSLLGI VFLLTGALLY MLCEKRRKQS LQCSP-DLHL HYVRVAADAN bmy_08654T0/1-279 MVPVLSLLGI VFLLTGALLY MLCKKRREQS LQCPPGKLGL ---------- BACU019332/1-253 MVPVLSLLGI VFLLTGALLY MLCKKRREQS LQCPP-DLHL HYVRVAADAN 301 350 ENSP00000293778/1-273 T----- ENSBTAP00000024371/1-252 AENGTL ENSTTRP00000007211/1-260 A----- bmy_08654T0/1-279 ------ BACU019332/1-253 A-----