KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:09 2014 Check: 00 .. Name: ENSP00000329200/1-364 Len: 400 Check: 5998 Weight: 1.00 Name: ENSBTAP00000024422/1-362 Len: 400 Check: 4746 Weight: 1.00 Name: ENSTTRP00000012411/1-340 Len: 400 Check: 4519 Weight: 1.00 Name: bmy_03888T0/1-396 Len: 400 Check: 4412 Weight: 1.00 Name: BACU018304/1-340 Len: 400 Check: 5030 Weight: 1.00 // 1 50 ENSP00000329200/1-364 MTEKEVLESP KPSFPAETRQ SGLQRLKQLL RKGSTGTKEM ELPPEPQANG ENSBTAP00000024422/1-362 MTEKEVLES- -SSFPSETRK GRLQRLKQLF RKESTGTKEM ELPPEPQANG ENSTTRP00000012411/1-340 ---------- ---------- --LQRLKQLF RKESTGTKEM ELPPEPQANG bmy_03888T0/1-396 MTEKEVLES- -SCFPAETRQ SGLQRLKQLF RKESTGTKEM ELPPEPQANG BACU018304/1-340 ---------- ---------- --LQRLKQLF RKESTGTKEM ELPPEPQANG 51 100 ENSP00000329200/1-364 EAVGAGGGPI YYIYEEEEEE EEEEEEPPPE PPKLVNDKPH KFKDHFFKKP ENSBTAP00000024422/1-362 EAVGAGGGPI YYIYEEEEEE EEEEEEPPPE PPKLVNDKPH KFKDHFFKKP ENSTTRP00000012411/1-340 EAVGAGGGPI YYIY--EEEE EEEEEEPPPE PPKLVNDKPH KFKDHFFKKP bmy_03888T0/1-396 EAVGAGGGPI YYIY--EEEE EEEEEEPPPE PPKLVNDKPH KFKDHFFKKP BACU018304/1-340 EAVGAGGGPI YYIY--EEEE EEEEEEPPPE PPKLVNDKPH KFKDHFFKKP 101 150 ENSP00000329200/1-364 KFCDVCARMI VLNNKFGLRC KNCKTNIHEH CQSYVEMQRC FGKIPPGFHR ENSBTAP00000024422/1-362 KFCDVCARMI VLNNKFGLRC KNCKTNIHEH CQSYVEMQRC FGKIPPGFHR ENSTTRP00000012411/1-340 KFCDVCARMI VLNNKFGLRC KNCKTNIHEH CQSYVEMQRC FGKIPPGFRR bmy_03888T0/1-396 KFCDVCARMI VLNNKFGLRC KNCKTNIHEH CQSYVEMQRC FGKIPPGFRR BACU018304/1-340 KFCDVCARMI VLNNKFGLRC KNCKTNIHEH CQSYVEMQRC FGKIPPGFRR 151 200 ENSP00000329200/1-364 AYSSPLYSNQ QYACVKDLSA ANRNDPVFET LRTGVIMANK ERKKGQADKK ENSBTAP00000024422/1-362 AYSSPLYSNQ QYACVKDLSS ANRNDPVFET LRTGVIMANK ERKKGQADKK ENSTTRP00000012411/1-340 AYSSPLYSNQ QYACVKDLSA ANRNDPVFET LRSGVIMANK ERKKGQADKK bmy_03888T0/1-396 AYSSPLYSNQ QYACVKDLSA ANRNDPVFET LRTGVIMANK ERKKGQADKK BACU018304/1-340 AYSSPLYSNQ QYACVKDLSA ANRNDPVFET LRTGVIMANK ERKKGQADKK 201 250 ENSP00000329200/1-364 N----PVAAM MEEEPESARP EEGKPQDGNP EGDKKAEKKT PDDK------ ENSBTAP00000024422/1-362 N----SLAAM MEEEPESARP EEGKPQDGNP EGDKKAEKKT PDDK------ ENSTTRP00000012411/1-340 N----SLAAM MEEEPESARL QEGKPQDGNP EGDKKAEKKT PDDK------ bmy_03888T0/1-396 NCPLQSLAAM MEEEPESARP QEGKPQNGNP DGDKKAEKKT PDDKVRIFSP BACU018304/1-340 N----SLAAM MEEEPESGRP QEGKPQNGNP DGDKKAEKKT PDDK------ 251 300 ENSP00000329200/1-364 ---------- ---------- ------HKQP GFQQSHYFVA LYRFKALEKD ENSBTAP00000024422/1-362 ---------- ---------- ------HKQP GFQQSHYFVA LYRFKALEKD ENSTTRP00000012411/1-340 ---------- ---------- ------HKQP GFQQSHYFVA LYRFKALEKD bmy_03888T0/1-396 YGDPSPLPNP VWDRDALRLI TPFHPQHKQP GFQQSHYFVA LYRFKALEKD BACU018304/1-340 ---------- ---------- ------HKQP GFQQSHYFVA LYRFKALEKD 301 350 ENSP00000329200/1-364 DLDFPPGEKI TVIDDSNEEW WRGKIGEKVG FFPPNFIIRV RAGERVHRVT ENSBTAP00000024422/1-362 DLDFPPGEKI TVIDDSNEEW WRGKIGEKVG FFPPNFIIRV RAGERVHRVT ENSTTRP00000012411/1-340 DLDFPPGEKI TVIDDSNEEW WRGKIGEKVG FFPPNFIIRV RSGERVHRVT bmy_03888T0/1-396 DLDFPPGEKI TVIDDSNEEW WRGKIGEKVG FFPPNFIIRV RSGERVHRVT BACU018304/1-340 DLDFPPGEKI TVIDDSNEEW WRGKIGEKVG FFPPNFIIRV RSGERVHRVT 351 400 ENSP00000329200/1-364 RSFVGNREIG QITLKKDQIV VQKGDEAGGY VKVYTGRKVG LFPTDFLEEI ENSBTAP00000024422/1-362 RSFVGNREIG QITLKKDQIV VQKGDETGGY VKVYTGRKVG LFPTDFLEEI ENSTTRP00000012411/1-340 RSFVGNREIG QITLKKDQIV VQKGDEAGGY VKVYTGRKVG LFPTDFLEEI bmy_03888T0/1-396 RSFVGNREIG QITLKKDQIV VQKGDEAGGY VKVYTGRKVG LFPTDFLEEI BACU018304/1-340 RSFVGNREIG QITLKKDQIV VQKGDEAGGY VKVYTGRKVG LFPTDFLEEI