KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:23:13 2014  Check: 00 ..

 Name: ENSP00000228841/1-166     Len:    170  Check:  1990  Weight:  1.00
 Name: ENSBTAP00000024444/1-166  Len:    170  Check:  1565  Weight:  1.00
 Name: BACU013610/1-170          Len:    170  Check:  4817  Weight:  1.00
 Name: bmy_07018T0/1-131         Len:    170  Check:  8308  Weight:  1.00
 Name: ENSTTRP00000014139/1-166  Len:    170  Check:  1761  Weight:  1.00

//


                          1                                                   50
ENSP00000228841/1-166     ----MAPKKA KKRAGGANSN VFSMFEQTQI QEFKEAFTIM DQNRDGFIDK 
ENSBTAP00000024444/1-166  ----MSPKKA KKRAEGANSN VFSMFEQTQI QEFKEAFTIM DQNRDGFIDK 
BACU013610/1-170          MLGGESPKKA KKRAEGANSN VFSMFEQSQI QEFKEAFTIM DQNRDGFIDK 
bmy_07018T0/1-131         ----MSPKKA KKRAEGANSN VFSMFEQSQI QEFKEAFTIM DQNRDGFIDK 
ENSTTRP00000014139/1-166  ----MSPKKA KKRPEGANSN VFSMFEQSQI QEFKEAFTIM DQNRDGFIDK 


                          51                                                 100
ENSP00000228841/1-166     NDLRDTFAAL GRVNVKNEEI DEMIKEAPGP INFTVFLTMF GEKLKGADPE 
ENSBTAP00000024444/1-166  NDLRDTFAAL GRVNVKNEEI DEMLKEAPGP INFTVFLQMF GEKLKGADPE 
BACU013610/1-170          NDLRDTFAAL GRVNVKNEEI DEMLKEAPGP INFTVFLQMF GEKLKGADPE 
bmy_07018T0/1-131         NDLRDTFAAL ---------- ---------- ---------- -----GSDPE 
ENSTTRP00000014139/1-166  NDLRDTFAAL GRVNVKNEEI DEMLKEAPGP INFTVFLQMF GEKLKGADPE 


                          101                                                150
ENSP00000228841/1-166     ETILNAFKVF DPEGKGVLKA DYVREMLTTQ AERFSKEEVD QMFAAFPPDV 
ENSBTAP00000024444/1-166  ETILNAFKVF DPEGKGVLKA DYIKEMLTTQ AERFSKEEID QMFAAFPPDV 
BACU013610/1-170          ETILNAFKVF DPEGKGVLRA DYIQEMLTTQ AERFSKEEVD QMFAAFPPDV 
bmy_07018T0/1-131         ETILNAFKVF DPEGKGVLRA DYIQEMLTTQ AERFSKEEID QMFAAFPPDV 
ENSTTRP00000014139/1-166  ETILNAFKVF DPEGKGVLRA DYIQEMLTTQ AERFSKEEID QMFAAFPPDV 


                          151                                                200
ENSP00000228841/1-166     TGNLDYKNLV HIITHGEEKD 
ENSBTAP00000024444/1-166  TGNLDYKNLV HIITHGEEKD 
BACU013610/1-170          TGNLDYKNLV HIITHGEEKD 
bmy_07018T0/1-131         TGNLDYKNLV HIITHGEEKD 
ENSTTRP00000014139/1-166  TGNLDYKNLV HIITHGEEKD