KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:13 2014 Check: 00 .. Name: ENSP00000396211/1-498 Len: 500 Check: 5267 Weight: 1.00 Name: ENSBTAP00000024447/1-493 Len: 500 Check: 669 Weight: 1.00 Name: ENSTTRP00000013112/1-498 Len: 500 Check: 5159 Weight: 1.00 Name: bmy_01993T0/1-498 Len: 500 Check: 4111 Weight: 1.00 Name: BACU003246/1-365 Len: 500 Check: 9336 Weight: 1.00 // 1 50 ENSP00000396211/1-498 MPLVTRNIEP RHLCRQTLPS VRSELECVTN ITLANVIRQL GSLSKYAEDI ENSBTAP00000024447/1-493 MPLVTRNIEP RHLCRQTLPS VRSELECMTN ITLANVIRQL GSLSKYAEDI ENSTTRP00000013112/1-498 MPLVTRNIEP RHLCRQTLPS VRSELECMTN ITLANVIRQL GSLSKYAEDI bmy_01993T0/1-498 MPLVTRNIEP RHLCRQTLPS VRSELECMTN ITLANVIRQL GSLSKYAEDI BACU003246/1-365 MPLVTRNIEP RHLCRQTLPS VRSELECMTN ITLANVIRQL GSLSKYAEDI 51 100 ENSP00000396211/1-498 FGELFTQANT FASRVSSLAE RVDRLQVKVT QLDPKEEEVS LQGINTRKAF ENSBTAP00000024447/1-493 FGELFTQANT FASRVSSLAE RVDRLQVKVT QLDPKEEEVS LQGINTRKAF ENSTTRP00000013112/1-498 FGELFTQANT FASRVSSLAE RVDRLQVKVT QLDPKEEEVS LQGINTRKAF bmy_01993T0/1-498 FGELFTQANT FASRVSSLAE RVDRLQVKVT QLDPKEEEVS LQGINTRKAF BACU003246/1-365 FGELFTQANT FASRVSSLAE RVDRLQVKVT QLDPKEEEVS LQGINTRKAF 101 150 ENSP00000396211/1-498 RSSTIQDQKL FDRNSLPVPV LETYNTCDTP PPLNNLTPYR DDGKEALKFY ENSBTAP00000024447/1-493 RSSTVQDQKL FDRNSLPIPV LETYNTCDTP PPLNNLTPYR DDGKEALKFY ENSTTRP00000013112/1-498 RSSTVQDQKL FDRNSLPIPV LETYNTCDTP PPLNNLTPYR DDGKEALKFY bmy_01993T0/1-498 RSSTVQDQKL FDRNSLPIPV LETYNTCDTP PPLNNLTPYR DDGKEALKFY BACU003246/1-365 RSSTVQDQKL FDRNSLPIPV LETYNTCDTP PPLNNLTPYR DDGKEALKFY 151 200 ENSP00000396211/1-498 TDPSYFFDLW KEKMLQDTKD IMKEKRKHRK EKKDNPNRGN VNPRKIKTRK ENSBTAP00000024447/1-493 TDPSYFFDLW KEKMLQDTKD IMKEKRKHRK EKKDNPNRGN VNPRKIKTRK ENSTTRP00000013112/1-498 TDPSYFFDLW KEKMLQDTKD IMKEKRKHRK EKKDNPNRGN VNPRKIKTRK bmy_01993T0/1-498 TDPSYFFDLW KEKMLQDTKD IMKEKRKHRK EKKDNPNRGN VNPRKIKTRK BACU003246/1-365 TDPSYFFDLW KEKMLQDTKD IMKEKRKHRK EKKDNPNRGN VNPRKIKTRK 201 250 ENSP00000396211/1-498 EEWEKMKMGQ EFVESKEKLG TSGYPPTLVY QNGSIGCVEN VDASSYPPPP ENSBTAP00000024447/1-493 EEWEKMKMGQ EFVESKEK-- PSRYPPTLVY QNGSIGSVEN VDAGNYPPPP ENSTTRP00000013112/1-498 EEWEKMKMGQ EFVESKEKLG PSGYPPTLVY QNGSVGSVDN VDASNYPPPP bmy_01993T0/1-498 EEWEKMKMGQ EFVESKEKLG PSGYPPALVY QNGSVGSVEN VDASNYPPPP BACU003246/1-365 EEWEKMKMGQ EFVESKEKLG PSGYPPALVY QNGSVGSVEN VDASNYPPPP 251 300 ENSP00000396211/1-498 QSDSASSPSP SFSEDNLPPP PAEFSYPVDN -QRGSGLAGP KRSSVVSPSH ENSBTAP00000024447/1-493 QSDSISPPSP SFSEDNLPPP PAEFSYPADN NQR----AGL KRSSVVSPSH ENSTTRP00000013112/1-498 QSDSTSPPSP SFSEDSLPPP PAEFSYPADS IQRGSGLAGP KRSSVVSPSH bmy_01993T0/1-498 QSDSTSPPSP SFSEDSLPPP PAEFSYPADN NQRGSGLAGP KRSSVVSPSH BACU003246/1-365 QSDSTSPPSP SFSEDSLPPP PAEFS----- ---------- ---------- 301 350 ENSP00000396211/1-498 PPPAPPLGSP PGPKPGFAPP PAPPPPPPPM IGIPPPPPPV GFGSPGTPPP ENSBTAP00000024447/1-493 PPPAPPLGSA PGPKPGFAPP PA-PPPPPPM INTPPPPPPG GFGSPATPPP ENSTTRP00000013112/1-498 PPPAPPLGSP PGPKPGFAPP PA-PPPPPPM MSTPPPPPLG GFGSPGTPPP bmy_01993T0/1-498 PPPAPPLGSP PGPKPGFAPP PA-PPPPPPM MSTPPPPPLG GFGSPGTPPP BACU003246/1-365 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000396211/1-498 PSPPSFPPHP DFAAPPPPPP PPAADYPTLP PPPLSQPTGG APPPPPPPPP ENSBTAP00000024447/1-493 PSPPSFPPHP DFAAPPPPPP PPAVDYSTLP PPPLSQSAGG APPPPPPPPP ENSTTRP00000013112/1-498 PSPPSFPPHP DFAAPPPPPP PPAADYSPLP PPPLSQPAGG APPPPPPPPP bmy_01993T0/1-498 PSPPSFPPHP DFAAPPPPPP PPAADYSPLP PPPLSQPAGG APPPPPPPPP BACU003246/1-365 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000396211/1-498 PGPPPPPFTG ADGQPAI-PP PLSDTTKPKS SLPAVSDARS DLLSAIRQGF ENSBTAP00000024447/1-493 PGPPPPPFSG ADGQLAAPPP PLSDTTKPKS SLPPVSDARS DLLSAIRQGF ENSTTRP00000013112/1-498 PGPPPPPFSG ADGQPAA-PS PLSDTTKPKS SLPPVSDARS DLLSAIRQGF bmy_01993T0/1-498 PGPPPPPFSG ADGQPAA-PS PLSDTTKPKS SLPPVSDARS DLLSAIRQGF BACU003246/1-365 ---------G ADGQPAA-PS PLSDTTKPKS SLPPVSDARS DLLSAIRQGF 451 500 ENSP00000396211/1-498 QLRRVEEQRE QEKRDVVGND VATILSRRIA VEYSDSEDDS SEFDEDDWSD ENSBTAP00000024447/1-493 QLRRVEEQRE QEKRDVVGND VATILSRRIA VEYSDSEDDS SEFDEDEWSD ENSTTRP00000013112/1-498 QLRRVEEQRE QEKRDVVGND VATILSRRIA VEYSDSEDDS SEFDEDEWSD bmy_01993T0/1-498 QLRRVEEQRE QEKRDVVGND VATILSRRIA VEYSDSEDDS SEFDEDEWSD BACU003246/1-365 QLRRVEEQRE QEKRDVVGND VATILSRRIA VEYSDSEDDS SEFDEDEWSD