KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:14 2014 Check: 00 .. Name: ENSTTRP00000004604/1-571 Len: 617 Check: 8676 Weight: 1.00 Name: bmy_05080T0/1-480 Len: 617 Check: 5778 Weight: 1.00 Name: BACU015290/1-581 Len: 617 Check: 6610 Weight: 1.00 Name: ENSP00000309539/1-572 Len: 617 Check: 2574 Weight: 1.00 Name: ENSBTAP00000024448/1-572 Len: 617 Check: 2794 Weight: 1.00 // 1 50 ENSTTRP00000004604/1-571 MSYQGKKNIP RITSDRLLIK GGKIVNDDQS FYADIYMEDG LIKQIGENLI bmy_05080T0/1-480 ---------- ---------- ---------- ---------- --------LL BACU015290/1-581 ---------- ---------- ---------- ------MEDG LIKQIGENLI ENSP00000309539/1-572 MSYQGKKNIP RITSDRLLIK GGKIVNDDQS FYADIYMEDG LIKQIGENLI ENSBTAP00000024448/1-572 MSYQGKKNIP RITSDRLLIK GGKIVNDDQS FYADIYMEDG LIKQIGENLI 51 100 ENSTTRP00000004604/1-571 VPGGVKTIEA HSRMVIPGGI DVHTRFQMPD QGMTSADDFF QGTKAALAGG bmy_05080T0/1-480 L--------- ---------- -VTTRV---- ---------- ---------- BACU015290/1-581 VPGGVKTIEA HSRMVIPGGI DVHTRFQMPD QGMTSADDFF QGTKAALAGG ENSP00000309539/1-572 VPGGVKTIEA HSRMVIPGGI DVHTRFQMPD QGMTSADDFF QGTKAALAGG ENSBTAP00000024448/1-572 VPGGVKTIEA HSRMVIPGGI DVHTRFQMPD QGMTSADDFF QGTKAALAGG 101 150 ENSTTRP00000004604/1-571 TTMI------ ---------- ---------- ---------- ---------I bmy_05080T0/1-480 CSFL------ ---------- ---------- ---------- ---------V BACU015290/1-581 TTMITLIPGL PGLPSSSLEA RDNLIPPDPG HGKGDLVGRG HGLQVWEAPV ENSP00000309539/1-572 TTMI------ ---------- ---------- ---------- ---------I ENSBTAP00000024448/1-572 TTMI------ ---------- ---------- ---------- ---------I 151 200 ENSTTRP00000004604/1-571 DHVVPEPGTS LLAAFDQWRE WADSKSCCDY SLHVDITEWH KGIQEEMETL bmy_05080T0/1-480 DHVVPEPGTS LLAAFDQWRE WADSKSCCDY SLHVDITEWH KGIQEEMEAL BACU015290/1-581 DHVVPEPGTS LLAAFDQWRE WADSKSCCDY SLHVDITEWH KGIQEEMEAL ENSP00000309539/1-572 DHVVPEPGTS LLAAFDQWRE WADSKSCCDY SLHVDISEWH KGIQEEMEAL ENSBTAP00000024448/1-572 DHVVPEPGTS LLAAFDQWRE WADSKSCCDY SLHVDITEWH KGVQEEMEAL 201 250 ENSTTRP00000004604/1-571 VKDHGVNSFL VYMAFKDRFQ LTDSQIYEVL SVIRDIGAIA QVHAENGDII bmy_05080T0/1-480 VKDHGVNSFL VYMAFKDRFQ LTDSQIYEVL SVIRDIGAIA QVHAENGDII BACU015290/1-581 VKDHGVNSFL VYMAFKDRFQ LTDSQIYEVL SVIRDIGAIA QVHAENGDII ENSP00000309539/1-572 VKDHGVNSFL VYMAFKDRFQ LTDCQIYEVL SVIRDIGAIA QVHAENGDII ENSBTAP00000024448/1-572 VKDHGVNSFL VYMAFKDRFQ LTDSQIYEVL SVIRDIGAIA QVHAENGDII 251 300 ENSTTRP00000004604/1-571 AEEQQRILDL GITGPEGHVL SRPEEVEAEA VNRSITIANQ TNCPLYITKV bmy_05080T0/1-480 AEEQQRILDL GITGPEGHVL SRPEEVEAEA VNRSITIANQ TNCPLYITKV BACU015290/1-581 AEEQQRILDL GITGPEGHVL SRPEEVEAEA VNRSITIANQ TNCPLYVTKV ENSP00000309539/1-572 AEEQQRILDL GITGPEGHVL SRPEEVEAEA VNRAITIANQ TNCPLYITKV ENSBTAP00000024448/1-572 AEEQQRILDL GITGPEGHVL SRPEEVEAEA VNRSITIANQ TNCPLYITKV 301 350 ENSTTRP00000004604/1-571 MSKSAAEVIA QARKKG-VMY GEPITASLGT DGSQYWSKNW AKAAAFVTXX bmy_05080T0/1-480 MSKSAAEVIA QARKKGTVVY GEPITASLGT DGSQYWSKNW AKAAAFVTSP BACU015290/1-581 MSKSAAEVIA QARKKGTVVY GEPITASLGT DGSQYWSKNW AKAAAFVTSP ENSP00000309539/1-572 MSKSSAEVIA QARKKGTVVY GEPITASLGT DGSHYWSKNW AKAAAFVTSP ENSBTAP00000024448/1-572 MSKSAAEVIA QARKKGTVVY GEPITASLGT DGSHYWSKNW AKAAAFVTSP 351 400 ENSTTRP00000004604/1-571 XXXXXXXXXX XXXXXXXXGD LQVTGSAHCT FNTAQKAVGK DNFTLIPEGT bmy_05080T0/1-480 PLSPDPTTPD FLNSLLSCGD LQVTGSAHCT FNTAQKAVGK DNFTLIPEGT BACU015290/1-581 PLSPDPTTPD FLNSLLSCGD LQVTGSAHCT FNTAQKAVGK DNFTLIPEGT ENSP00000309539/1-572 PLSPDPTTPD FLNSLLSCGD LQVTGSAHCT FNTAQKAVGK DNFTLIPEGT ENSBTAP00000024448/1-572 PLSPDPTTPD FLNSLLSCGD LQVTGSAHCT FNTAQKAVGK DNFTLIPEGT 401 450 ENSTTRP00000004604/1-571 NGTEERMSVI WDKAVVTGKM DENQFVAVTS TNAAKVFNLY PRKGRIAVGS bmy_05080T0/1-480 NGTEERLSVI WDKAVVTGKM DENQFVAVTS TNAAKVFNLY PRKGRIAVGS BACU015290/1-581 NGTEERLSVI WDKAVVTGKM DENQFVAVTS TNAAKVFNLY PRKGRIAVGS ENSP00000309539/1-572 NGTEERMSVI WDKAVVTGKM DENQFVAVTS TNAAKVFNLY PRKGRIAVGS ENSBTAP00000024448/1-572 NGTEERMSVI WDKAVVTGKM DENQFVAVTS TNAAKVFNLY PRKGRIAVGS 451 500 ENSTTRP00000004604/1-571 DADLVIWDPD SVKTVSAKTH NSSLEYNIFE GMECRGSPLV VISQGKIVLE bmy_05080T0/1-480 DADLVIWDPD SVKTISAKTH NSSLEYNIFE GMECRGSPLV VISQGKIVLE BACU015290/1-581 DADLVIWDPD SVKTISAKTH NSSLEYNIFE GMECRGSPLV VISQGKIVLE ENSP00000309539/1-572 DADLVIWDPD SVKTISAKTH NSSLEYNIFE GMECRGSPLV VISQGKIVLE ENSBTAP00000024448/1-572 DADLVIWDPD SVKTISAKTH NSSLEYNIFE GMECRGSPLV VISQGKIVLE 501 550 ENSTTRP00000004604/1-571 DGTLHVTEGS GRYIPRKPFP DFVYKRIKAR SRLAELRGVP RGLYDGPVCE bmy_05080T0/1-480 DGTLHVTEGS GRYIPRKPFP DFVYKRIKAR SRLAELRGVP RGLYDGPVCE BACU015290/1-581 DGTLHVTEGS GRYIPRKPFP DFVYKRIKAR SRLAELRGVP RGLYDGPVCE ENSP00000309539/1-572 DGTLHVTEGS GRYIPRKPFP DFVYKRIKAR SRLAELRGVP RGLYDGPVCE ENSBTAP00000024448/1-572 DGTLHVTEGS GRYIPRKPFP DFVYKRIKAR SRLAELRGVP RGLYDGPVCE 551 600 ENSTTRP00000004604/1-571 VSVTPKTVTP ASSAKTSPAK QQAPPVRNLH QSGFSLSGAQ IDDNIPRRTT bmy_05080T0/1-480 VSVTPKTVTP ASSAKTSPAK QQAPPVRNLH QSGFSLSGAQ IDDNIPRRTT BACU015290/1-581 VSVTPKTVTP ASSAKTSPAK QQAPPVRNLH QSGFSLSGAQ IDDNIPRRTT ENSP00000309539/1-572 VSVTPKTVTP ASSAKTSPAK QQAPPVRNLH QSGFSLSGAQ IDDNIPRRTT ENSBTAP00000024448/1-572 VSVTPKTVTP ASSAKTSPAK QQAPPVRNLH QSGFSLSGAQ IDDNIPRRTT 601 650 ENSTTRP00000004604/1-571 QRIVAPPGGR ANITSLG bmy_05080T0/1-480 QRIVAPPGGR ANITSLG BACU015290/1-581 QRIVAPPGGR ANITSLG ENSP00000309539/1-572 QRIVAPPGGR ANITSLG ENSBTAP00000024448/1-572 QRIVAPPGGR ANITSLG