KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:23:15 2014 Check: 00 .. Name: ENSP00000264771/1-504 Len: 507 Check: 6637 Weight: 1.00 Name: ENSBTAP00000024455/1-480 Len: 507 Check: 3386 Weight: 1.00 Name: bmy_12243T0/1-498 Len: 507 Check: 9451 Weight: 1.00 Name: ENSTTRP00000010693/1-507 Len: 507 Check: 2915 Weight: 1.00 // 1 50 ENSP00000264771/1-504 MSQPRTPEQA LDTPGDCPPG RRDEDAGEGI QCSQRMLSFS DALLSIIATV ENSBTAP00000024455/1-480 MSGPQAPEPT LEGQADASAG SPDEDAAEGI QHSHRMLSFS DALLSIIATV bmy_12243T0/1-498 MSGPRTPEPA LDGQGASSTG SQDEDMADGI QHSHRMLSFS DALLSIIATV ENSTTRP00000010693/1-507 MSGPQTPEPA LGGRGASSTG SQDEDTADGI QSSHRMLSFS DALLSIIATV 51 100 ENSP00000264771/1-504 MILPVTHTEI SPEQQFDRSV QRLLATRIAV YLMTFLIVTV AWAAHTRLFQ ENSBTAP00000024455/1-480 M--------- ----EFDKSV QRLLATRIAV YLMTFLIVTV AWAAHTRLFQ bmy_12243T0/1-498 MILPVTHTEI SPEQEFDKSV QKLLATRIAV YLMTFLIVTV AWAAHTRLFQ ENSTTRP00000010693/1-507 MILPVTHTEI SPEQEFDKSV QKLLATRIAV YLMTFLIVTV AWVAHTRLFQ 101 150 ENSP00000264771/1-504 VVGKTDDTLA LLNLACMMTI TFLPYTFSLM VTFPDVPLGI FLFCVCVIAI ENSBTAP00000024455/1-480 VVGKIDDTLA LLNL---VSL SF----GSWV RAPRSRSQGR W----SALGV bmy_12243T0/1-498 VVGKIDDTLA LLNLACMMTI TFLPFTNILQ RAPPDT---- -LLAPCSPPL ENSTTRP00000010693/1-507 VVGKIDDTLA LLNLACMMSI TFLPFTFSLM VAFPEVPLGI LLFCVCVMAV 151 200 ENSP00000264771/1-504 GVVQALIVGY AFHFPHLLSP QIQRSAHRAL YRRHVLGIVL QGPALCFAAA ENSBTAP00000024455/1-480 GPVQALIVLY AFHFPHLLSP QIERSAHRGL YRQRVLGIIV RGPALCLAAA bmy_12243T0/1-498 P--QALIVVY AFHFPHLLSP QIECSAHRAL YRQHILGIIL RGPALCLAAA ENSTTRP00000010693/1-507 GAVQALIVVY AFHCPHLLSP QIERSAHRAL YRQHILGIVL RGPALCLAAA 201 250 ENSP00000264771/1-504 IFSLFFVPLS YLLMVTVILL PYVSKVTGWC RDRLLGHREP SAHPVEVFSF ENSBTAP00000024455/1-480 GFSLFFYPAS YLLMAMVIVL PHVSKAAGWC RAQLVGPREP PAHSVEVFTF bmy_12243T0/1-498 GFSLFFYPVS YLLMATVIFL PYVSKAAGWC RARLVGPREP PARSLEIFTF ENSTTRP00000010693/1-507 GFSLFFYPVS YLLMATVIFL PYVSKVAGWC RARLVGPREP PAHSLEIFTF 251 300 ENSP00000264771/1-504 DLHEPLSKER VEAFSDGVYA IVATLLILDI CEDNVPDPKD VKERFSGSLV ENSBTAP00000024455/1-480 DLHEPLSKER VEAFSDGVYA IVATLLILDI CEDNVPDAKD VKEKFQGSLV bmy_12243T0/1-498 DLHEPLSKER VEAFSDGVYA IVATLLILDI CEDNVPDSKD VKEKFHGSLV ENSTTRP00000010693/1-507 DLHEPLSKER VEAFSDGVYA IVATLLILDI CEDNVPDSKD VKAKFHGSLV 301 350 ENSP00000264771/1-504 AALSATGPRF LAYFGSFATV GLLWFAHHSL FLHVRKATRA MGLLNTLSLA ENSBTAP00000024455/1-480 AALGESGPHF LAYFGSFATV GLLWFAHHSL FLHIRRATQP MGLLNTLSLA bmy_12243T0/1-498 AALGASGPHF LAYFGSFATV GLLWFAHHSL FLHIRKATQP MGLLNTLSLA ENSTTRP00000010693/1-507 AALGASGPHF LAYFGSFATV GLLWFAHHSL FLHIRKATQP MGLLNTLSLA 351 400 ENSP00000264771/1-504 FVGGLPLAYQ QTSAFARQPR DELERVRVSC TIIFLASIFQ LAMWTTALLH ENSBTAP00000024455/1-480 FVGGLPLAYQ QTSAFTKQPR DELESVRISC AIIFLASIFQ FAIWTTALLQ bmy_12243T0/1-498 FVGGLPLAYQ QTSAFARRPH DELESVRVSC AIIFFASIFQ FAIWTTALLQ ENSTTRP00000010693/1-507 FVGGLPLAYQ QTSAFARRPH DELESVRVSC AIIFFASIFQ FAIWTTALLQ 401 450 ENSP00000264771/1-504 QAETLQPSVW FGGREHVLMF AKLALYPCAS LLAFASTCLL SRFSVGIFHL ENSBTAP00000024455/1-480 EGETLQPSAR FGGREHAFMF AKLALYPCAS LLAFACTCVL SSFSTAIFHA bmy_12243T0/1-498 EGETLQPSAR FGGREHAFMF AKLALYPCAS LLAFACTCVL SRFSTAILHA ENSTTRP00000010693/1-507 GGETLQPSVR FGGREHAFMF AKLVLYPCAS LLAFACTCVL SSFSTAIFHA 451 500 ENSP00000264771/1-504 MQIAVPCAFL LLRLLVGLAL ATLRVLRGLA R---PEHPPP APTGQDDPQS ENSBTAP00000024455/1-480 MQIAVPFAFL LLRLLVRLAL AGLRALRGLV G---PVLARP APGAADEAQS bmy_12243T0/1-498 MQIAVPFAFL VLRLLVRLLL AGLRGLRGLR GL--RGLARP APGAVDDAQS ENSTTRP00000010693/1-507 MQIAVPFTFL LLRLLVRLAL AGLRGLRGLR GLARPTHTRP VPGATDDAQS 501 550 ENSP00000264771/1-504 QLLPAPC ENSBTAP00000024455/1-480 PLLPAPC bmy_12243T0/1-498 PLLPAPC ENSTTRP00000010693/1-507 PLLPAPC