KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:15 2014 Check: 00 .. Name: ENSTTRP00000007432/1-398 Len: 399 Check: 1671 Weight: 1.00 Name: bmy_05040T0/1-365 Len: 399 Check: 3149 Weight: 1.00 Name: ENSP00000385746/1-366 Len: 399 Check: 2544 Weight: 1.00 Name: BACU005513/1-331 Len: 399 Check: 7480 Weight: 1.00 Name: ENSBTAP00000024458/1-349 Len: 399 Check: 1062 Weight: 1.00 // 1 50 ENSTTRP00000007432/1-398 PRRRTPRRPQ PDTPRGPPVS GRSPRHGPGP RLTMAAARHS TLDFMLGTKX bmy_05040T0/1-365 ---------- ---------- ---------- ---MAAARYS TLDFTLSAKA ENSP00000385746/1-366 ---------- ---------- ---------- ---MAAARHS TLDFMLGAKA BACU005513/1-331 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024458/1-349 ---------- ---------- ---------- ---------- ---------A 51 100 ENSTTRP00000007432/1-398 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX FANLRIYPHG bmy_05040T0/1-365 DGETILKGLQ SIFQERGMTE SVHTWQDHGY LATYINKNGS FANLRIYPHG ENSP00000385746/1-366 DGETILKGLQ SIFQEQGMAE SVHTWQDHGY LATYTNKNGS FANLRIYPHG BACU005513/1-331 ---------- -------MTE SVHTWQDHGY LATYINKNGS FANLRIYPHG ENSBTAP00000024458/1-349 DGETILKGLQ SIFQEQGMTE SVHTWQDHGY LATYINKNGS FANLRIYPHG 101 150 ENSTTRP00000007432/1-398 LVLLDLQSYD GDAQGK-EVD SLLNKVEERM KELSQDSTER VKRLPPIVRG bmy_05040T0/1-365 LVLLDLQSYD XDAQGK-EVD SLLNKVEERM KELSQDSTEQ VKRLPPTVRG ENSP00000385746/1-366 LVLLDLQSYD GDAQGKEEID SILNKVEERM KELSQDSTGR VKRLPPIVRG BACU005513/1-331 LVLLDLQSYD GDAQGK-EVD SLLNKVEERM KELSQDSTER VKRLPPIVRG ENSBTAP00000024458/1-349 LVLLDLQSYD GDAQGK-EVD SLLNKVEERM KELSQDSTER VKRLPPIVRG 151 200 ENSTTRP00000007432/1-398 GAIDRYWPTA DGRLVEYDID EVVYDEDSPY QNIKILHSKQ FGNILILSGD bmy_05040T0/1-365 GAIDRYWPTA DGRLVEYDID EVVYDEDSPY QNIKILHSKQ FGNILILSGD ENSP00000385746/1-366 GAIDRYWPTA DGRLVEYDID EVVYDEDSPY QNIKILHSKQ FGNILILSGD BACU005513/1-331 GAIDRYWPTA DGRLVEYDID EVVYDEDSPY QNIKILHSKQ FGNILILSGD ENSBTAP00000024458/1-349 GAIDRYWPTA DGRLVEYDID KVVYDEDSPY QNIKILHSKQ FGNILILSGD 201 250 ENSTTRP00000007432/1-398 VNLAESDLAY TRAIMGSGKE DYTGKDVLIL GGGDGGILCE IVKLKPKMVT bmy_05040T0/1-365 VNLAESDLAY TRAIMGSSKE DYTGKDVLIL GGRDGGILCE IVKLKPKMVT ENSP00000385746/1-366 VNLAESDLAY TRAIMGSGKE DYTGKDVLIL GGGDGGILCE IVKLKPKMVT BACU005513/1-331 VNLAESDLAY TRAIMGSGKE DYTGKDVLIL GGGDGGILCE IVKLKPKMVT ENSBTAP00000024458/1-349 VNLAESDLAY TRAIMGSGKE DYSGKDVLIL GGGDGGILCE IVKLKPKMVT 251 300 ENSTTRP00000007432/1-398 MVEIDQMVID GCKKYMRKTC GDVLDNLKGD CYQVLIEDCI PVLKRYAKEG bmy_05040T0/1-365 MVEIDQMVID GCKKYMRKTC GDVLDNLKGD CYQVLIEDCI PVLKRYAKEG ENSP00000385746/1-366 MVEIDQMVID GCKKYMRKTC GDVLDNLKGD CYQVLIEDCI PVLKRYAKEG BACU005513/1-331 MVEIDQMVID GCKKYMRKTC GDVLDNLKGD CYQVLIEDCI PVLKRYAKEG ENSBTAP00000024458/1-349 MVEIDQMVID GCKKYMRKTC GDVLDNLKGD CYQVLIEDCI PVLKRYAKEG 301 350 ENSTTRP00000007432/1-398 REFDYVINDL TAVPISTSPE EDSTWEFLRL ILDLSMKVLK QDGKYFTQGN bmy_05040T0/1-365 REFDYVINDL TAVPISTSPE EDSTWEFLRL ILDLSMKVLK QDGKYFTQRN ENSP00000385746/1-366 REFDYVINDL TAVPISTSPE EDSTWEFLRL ILDLSMKVLK QDGKYFTQGN BACU005513/1-331 REFDYVINDL TAVPISTSPE EDSTWEFLRL ILDLSMKVLK QDGKYFTQGN ENSBTAP00000024458/1-349 REFDYVINDL TAVPISTSPE EDSTWEFLRL ILDLSMKVLK QDGKYFTQGN 351 400 ENSTTRP00000007432/1-398 CVNLTEALSL YEEQLGHLYC PVEFSKEIVC VPSYLELWVF YTVWKKAKP bmy_05040T0/1-365 CVNLTEALSL YEEQLGRLYC PVEFSKEIVC VPSYLELWVF YTVWKKAKP ENSP00000385746/1-366 CVNLTEALSL YEEQLGRLYC PVEFSKEIVC VPSYLELWVF YTVWKKAKP BACU005513/1-331 CVNLTEALSL YEEQLGHLYC PVEFSKEIVC VPSYLELWVF YTVWKKAKP ENSBTAP00000024458/1-349 CVNLTEALSL YEEQLGRLYC PVEFSKEIVC VPSYLELWVF YTVWKKAKP