KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:19 2014 Check: 00 .. Name: ENSP00000462963/1-360 Len: 611 Check: 3022 Weight: 1.00 Name: bmy_08845T0/1-259 Len: 611 Check: 5228 Weight: 1.00 Name: ENSBTAP00000024467/1-360 Len: 611 Check: 249 Weight: 1.00 Name: ENSTTRP00000004669/1-360 Len: 611 Check: 2046 Weight: 1.00 Name: BACU013930/1-423 Len: 611 Check: 4089 Weight: 1.00 // 1 50 ENSP00000462963/1-360 ---------- ---------- ---------- ---------- ---------- bmy_08845T0/1-259 ---------- ---------- ---------- -------MQW KEPAAHPGAP ENSBTAP00000024467/1-360 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004669/1-360 ---------- ---------- ---------- ---------- ---------- BACU013930/1-423 MPQFLETHLR SDSTKAPVVS SYLVELFSCP ILHSRPSQIW SQPQLPPSLP 51 100 ENSP00000462963/1-360 ---------- ---------- ---------- ---------- ---------- bmy_08845T0/1-259 D--------- ---------- ---------- ---------- ---------- ENSBTAP00000024467/1-360 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004669/1-360 ---------- ---------- ---------- ---------- ---------- BACU013930/1-423 NRTLSRPSVK ATSSYLSLPR RLSSHSSPLE LLKHHLASVP VIPFYLVIWL 101 150 ENSP00000462963/1-360 ---------- ---------- ---------- ---------- ---------- bmy_08845T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024467/1-360 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004669/1-360 ---------- ---------- ---------- ---------- ---------- BACU013930/1-423 CMFLPTLPHQ TLGRAPKGAH QSVCLDNKPR VSPKEGSCQL QAKTRPGVFF 151 200 ENSP00000462963/1-360 ---------- ---------- ---------- ---------- ---------- bmy_08845T0/1-259 ---------- ---------- ---------- ---PGTIPAG VCPEAQRSGC ENSBTAP00000024467/1-360 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004669/1-360 ---------- ---------- ---------- ---------- ---------- BACU013930/1-423 PDILLTGSQG PERARPFPGC SGRSLRRTRG LRIPAQSRPA SAQRRSGAAA 201 250 ENSP00000462963/1-360 ---------- ---------- ---------- ---------- ---------- bmy_08845T0/1-259 HSPAGTTSGR PERRFRWNLP TERPGAFGRS TQEPEVSGGR RAREPTALTW ENSBTAP00000024467/1-360 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004669/1-360 ---------- ---------- ---------- ---------- ---------- BACU013930/1-423 RSPAGTSSGR PERRFRWNLS TERLGAFGRG TQEPEVSGGR RAREPTALTW 251 300 ENSP00000462963/1-360 -MSGSVLFTA GERWRCFLTP SRSSLYWALH NFCCRKKSTT PKKITPNVTF bmy_08845T0/1-259 KMNILSLLLA GGRWRCFPVP LGSSLFQALR NSXCXXKSTA PKKIIPHVDF ENSBTAP00000024467/1-360 -MTVPSLLLA GGKWRCFPLP LASSLFQALH NSCCRKESTA PKKIIPHIDF ENSTTRP00000004669/1-360 -MNVPSLLLA GGRWRCFPVP LGFSLFQGLH NSCCRKKSTA PKKIIPHVDF BACU013930/1-423 KMNILSLLLA GGRWRCFPVP LGSSLFQSLH NSCYRKKSTA PKKIIPHVDF 301 350 ENSP00000462963/1-360 CDENAKEPEN ALDKLFSSEQ QASILHVLNT ASTKELEAFR LLRGRRSINI bmy_08845T0/1-259 SDENAKESGK ALDKLFSSEQ QASILHVLNT ASNKELEAFT LLRGKKSLSI ENSBTAP00000024467/1-360 SDETAKESGK TLDKLFSSEQ QASILHVLNT ASNKELEAFK LLRGKKSFNI ENSTTRP00000004669/1-360 SDENAKESGK ALDKLFSSEQ QASILHVLNT ASNKELEAFT LLRGKKSLSI BACU013930/1-423 SDENAKESGK ALDKLFSSEQ QASILHVLNT ASNKELEAFT LLRGKKSLSI 351 400 ENSP00000462963/1-360 VEHRENFGPF QNLESLMNVP LFKYKSTVQV CNSILCPKTG REKRKSPENR bmy_08845T0/1-259 VEHREKFGPF QNLESLMNVP LLQYKTTIQV CNSILNPETG GKKRKLQENR ENSBTAP00000024467/1-360 VEHRKKFGPF QNLESLMNVP LFQYKITIQV CNSILNPETG GKKKKLQESR ENSTTRP00000004669/1-360 VEHREKFGPF QNLGSLMNVP LFQYKTTIQV CNSILNPETG GKKRKLQENR BACU013930/1-423 VDHREKFGPF QNLESLMNVP LFQYKTTIQV CNSILNPETG GKKRKLQENR 401 450 ENSP00000462963/1-360 FLRKLLKPDI ERERLKAVNS IISIVFGTRR IAWAHLDRKL TVLDWQQSDR bmy_08845T0/1-259 LLRKLIKPEI GRERLK---- ---------- ---------- ---------- ENSBTAP00000024467/1-360 LLRKLIKPEI GRERVKAVNS IVSIVSGTRR IAWAHLDRKL AVLDWQQTEY ENSTTRP00000004669/1-360 LLRKLIKPEI GRERLKAINS IVSIVSGTRR IAWAHLDRKL AVLDWQQTEY BACU013930/1-423 LLRKLIKPEI GRERLK---- ---------- ---------- ---------- 451 500 ENSP00000462963/1-360 WSLMRGIYSS SVYLEEISSI ISKMPKADFY VLEKTGLSIQ NSSLFPILLH bmy_08845T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024467/1-360 CQLMKGSYLS SVYLEEISSI ISKMPKADFY VLEKAGPSFQ NPSLFPVLLH ENSTTRP00000004669/1-360 CRLMKGTYLS SVYLEEISSV ISKMPKADFY VLEKTGPSFQ NSSLFPILLH BACU013930/1-423 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000462963/1-360 FHIMEAMLYA LLNKTFAQDG QHQVLSMNRN AVGKHFELMI GDSRTSGKEL bmy_08845T0/1-259 ------VYSF FINASFTA-- ---------- ---------- ---------- ENSBTAP00000024467/1-360 FHMTEAMLYA LLNTTFAQDG HHQVLSMNRN AVGKHFELMI GDTRTSGKEV ENSTTRP00000004669/1-360 FHIMEAMLYA LLNTTFTQDG HHQVLSMNRN AVGKHFELMI GDTRTSGKEV BACU013930/1-423 ---------- ---------- --------KN CLGSP----- ---------- 551 600 ENSP00000462963/1-360 VKQFLFDSIL KADPRVFFPS DKIVHYRQMF LSTELQRVEE LYDSLLQAIA bmy_08845T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024467/1-360 VKQLLSESVL KDEPRVFFPP EKIVRYRQMF SSTEHNRVEE LYDSLLQAIA ENSTTRP00000004669/1-360 VKQLLSESVL KEEPRVFFPL DKIVHYRQMF SSTEQYRVEE LYDSLLQAIA BACU013930/1-423 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000462963/1-360 FYELAVFDSQ P bmy_08845T0/1-259 ---------- - ENSBTAP00000024467/1-360 FYELAVFNTE S ENSTTRP00000004669/1-360 FYELAVFNTE S BACU013930/1-423 ---------- -