KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:22 2014 Check: 00 .. Name: ENSP00000375951/1-1199 Len: 1204 Check: 5608 Weight: 1.00 Name: ENSBTAP00000024502/1-1199 Len: 1204 Check: 6883 Weight: 1.00 Name: ENSTTRP00000001981/1-1193 Len: 1204 Check: 2607 Weight: 1.00 Name: bmy_13360T0/1-1199 Len: 1204 Check: 6977 Weight: 1.00 Name: BACU012710/1-1199 Len: 1204 Check: 3176 Weight: 1.00 // 1 50 ENSP00000375951/1-1199 MASAGTQHYS IGLRQKNSFK QSGPSGTVPA TPPEKPSEGR VWPQAHQQVK ENSBTAP00000024502/1-1199 MASARTEHYD ISLRRGHSLK QSGPTGTAPT LSPEKPSEGK VWAQAHQQVK ENSTTRP00000001981/1-1193 MASARTEHYT IG--RGNSFK PSGPSGTVPT PPPEKPSEGK VWAQGHQQVK bmy_13360T0/1-1199 MASARTEHYS IGLRRGNSFK PSGPSGTVPT PPPEKPSEGK VWAQAHQQVK BACU012710/1-1199 MASARTEHYS IGLRRGNSFK PSGPSGTVPT PPPEKPSEGK VWAQAHQQVK 51 100 ENSP00000375951/1-1199 PIWKLEKKQV ETLSAGLGPG LLGVPPQPAY FFCPSTLCSS GTTAVIAGHS ENSBTAP00000024502/1-1199 PIWRLEKKHV GTLSAGLGPG LLGAPPQPAY FFCPSTLCSS GTTAVTAGHS ENSTTRP00000001981/1-1193 PIWKVEKKHV GTRSAELGPG LLGVPPQPTY FFCPSTLCSS GSTAVIAGHS bmy_13360T0/1-1199 PIWKLEKKHV GTLSAGLGPG LLGVPRQPAY FFCPSTLCSS RSTAVIAGHS BACU012710/1-1199 PIWKLEKKHV GTLSAGLGPG LLGVPPQPAY FFCPSTLCSS GSTAVIAGHS 101 150 ENSP00000375951/1-1199 SSCYLHSLPD LFNSTLLYRR SSYRQKPYQQ LESFCLRSSP SEKSPFSLPQ ENSBTAP00000024502/1-1199 NCCYLHSLPD LFSSTLIYRR SNYRHKAYQQ LESFCLRSSP SEKRPFSLPQ ENSTTRP00000001981/1-1193 NSCYLHSLPD LFSSTLLYRH SNYGHRPYQQ LESFCLHSSL SEKRPLSLPQ bmy_13360T0/1-1199 NSCYLHSLPD LFSSTLLYRR SNYGXRPYQQ LESFCLRSSP SEKRPFSLPQ BACU012710/1-1199 NSCYLHSLPD LFSSTLLYRR SNYGHRPYQQ LESFCLRSSP SEKRPFSLPQ 151 200 ENSP00000375951/1-1199 KSLPVSLTAN KATSSMVFSM AQPMASSSTE PYLCLAAAGE NPSGKSLASA ENSBTAP00000024502/1-1199 KRLPVRLPAN KATSSKL--- -IPMASSSTE PYSSLGAAGE SLSGRSLASA ENSTTRP00000001981/1-1193 KRLPIRLTAN KATSSKV--- -SPMASSSTE PYLSLGAAGE NPSGKSLASA bmy_13360T0/1-1199 KSLPIRLTAS KATSSKV--- -SPMASSSTE PYLSLGAAGE NPSGKSLASA BACU012710/1-1199 KSLPIRLTAN KATSSKV--- -SAMASSSTE PYLSLGAAGE NPSGKSLASA 201 250 ENSP00000375951/1-1199 ISGKIPSPL- --SSSYKPML NNNSFMWPNS TPVPLLQTTQ GLKPVSPPKI ENSBTAP00000024502/1-1199 ISGKTPSPLP SSSSSYKPML NNNSFMRPNS TKVPLSQATE GLKPVSSPKV ENSTTRP00000001981/1-1193 ISGKTPSPLS SSSSSYKPML NNNSFMRPNS TKVPLLQATE GLKPVSHPKV bmy_13360T0/1-1199 ISGKTPSPLS SSSSSYKPML NNNSFMRPNS TKVPLLQATE GLKPVSSPKV BACU012710/1-1199 ISGKTPSPLS SSSSSYKPML NNNSFMRPNS TEVPLLQATE GLKPVSSPKV 251 300 ENSP00000375951/1-1199 QPVSWHHSGG TGDCAPQPVD HKVPKSIGTV PADASAHIAL STASSHDTST ENSBTAP00000024502/1-1199 QLISWQHSGG TGDCAFQSVE HKAPKSSGPA LDDAPPHNML STPSSLDTSA ENSTTRP00000001981/1-1193 QLVSWHQSGG T-DCALQPVE HKV-KSSGT- LDDDPSHSTL STPSFLDAST bmy_13360T0/1-1199 QLVSWRHSGG TGDCALQPIE HKVPKSSGTV LDDDPSHSTL STPSSLDAST BACU012710/1-1199 QPVSWHHSGG TGDCALQPIE HKVPKSSGTV LDDDPSHSTL FTPSSLDAST 301 350 ENSP00000375951/1-1199 TSVASSWYNR NNLAMRAEPL SCALDDSSDS QDPTKEIRFT EAVRKLTARG ENSBTAP00000024502/1-1199 TSVASSLYSQ SNLVTRTQSY PYGLKGDPVS QTLTKEVRFT EAVRKLTARG ENSTTRP00000001981/1-1193 TSAASPHYNW SNLATGAEPH PCGLDGDSVS QNLTKEVRFT EAVRKLTARG bmy_13360T0/1-1199 TSAASPHCHW SNLATGSEPH RYGLDGDSVS QNLTKEVRFT EAVRKLTARG BACU012710/1-1199 TSAASPHYNW SNLATGAEPH PYGLDGDSVA QNLTKEVRFT EAVRKLTARG 351 400 ENSP00000375951/1-1199 FEKMPRQGCQ LEQSSFLNPS FQWNVLNRSR RWKPPAVNQQ FPQEDAGSVR ENSBTAP00000024502/1-1199 LEKKPRQGYH FEQTYFMNPS LQWDLLNQNR RWKPPVASQQ VPQEDAGADN ENSTTRP00000001981/1-1193 FEKKPRQGYH FEQSYFMNPS LQWDVLNRNR WWKPAVVGQQ LPQENAGADS bmy_13360T0/1-1199 FEKKPRQGYH FEQSYFMNPS LQWDVLNRNR WWKPAVVGQQ LPQKNAGADS BACU012710/1-1199 FEKKPRQGYH FEQSYFMNPS LQWEVLNRNR WWKPAVVGQQ LPQENAGADS 401 450 ENSP00000375951/1-1199 RVLPGASDTL GLDNTVFCTK RISIHLLASH ASGLNHNPAC ESVIDSSAFG ENSBTAP00000024502/1-1199 RALPAVSDPG GLDSAVFCTK RISIHLLASH TNGLSYSPAC GSTIDSPLLG ENSTTRP00000001981/1-1193 SVLPGASDTM ELDSTVFCTK HISIHLLASH ASGLSCSPAC GSAINSPPLG bmy_13360T0/1-1199 RVLPGASDTM ELDSTVFCTK RISIHLLASH ASGLSCSPAC GSVIDSPPLG BACU012710/1-1199 RVLPGASDTM ELDSTVFCTK RISIHLLASH ASGLSCSPAC GSAIDSPPLG 451 500 ENSP00000375951/1-1199 EGKAPGPPFP -QTLGIANVA TRLSSIQLGQ SEKERPEEAR ELDSSDRDIS ENSBTAP00000024502/1-1199 EDKTPVPPSP SQPLGVAEVA TRLSSIHLGK LGREGPKEAR ELNSPPRTVG ENSTTRP00000001981/1-1193 EDKTPSLPSP PQPLGVAEVA THLSSIHLGK LGREEPKEAR KLDSPARDIG bmy_13360T0/1-1199 EDKTPALPSP PQPLGVAEVA TRLSSIHLGK LGREEPKEAR KLDSPARDIG BACU012710/1-1199 EDKTPALPSP PQPLGVAEVA TRLSSIHLGK LGREEPKEAR KLDSPARDIG 501 550 ENSP00000375951/1-1199 SATDLQPDQA ETEDTEEELV DGLEDCCSRD ENEEEEGDSE CSSLSAVSPS ENSBTAP00000024502/1-1199 SATDLQLDPV ETEDLEEELL DGLEDCCSQV ENEEEEGDSE CSSCSAVSPS ENSTTRP00000001981/1-1193 SATDLQLDQV EAEDLEEELI DGLEDCCNHD ENEEEEGDSE CSSCSAVSPS bmy_13360T0/1-1199 SATDLQLDQV EAEDLEEELI DGLEDCCNHD ENEEEEGDSE CSSCSAVSPS BACU012710/1-1199 SATDLQLDQV EAEDLEEELI DGLEDCCNHD ENEEEEGDSE CSSCSAVSPS 551 600 ENSP00000375951/1-1199 ESVAMISRSC MEILTKPLSN HEKVVRPALI YSLFPNVPPT IYFGTRDERV ENSBTAP00000024502/1-1199 ESVAVISRNC MEFLTKPLSN -EKVVRPALI YSLFPNVPPT IYFGTPDERV ENSTTRP00000001981/1-1193 ESVAVISRNC MEILTKPLSK -EKVVRPALI YSLFPNVPPT IYFGTPDERV bmy_13360T0/1-1199 ESVAVISRNC MEILTKPLSN -EKVVRPALI YSLFPNVPPT IYFGTPDERV BACU012710/1-1199 ESVAVISRNC MEILTKPLSN -EKVVRPALI YSLFPNVPPT IYFGTPDERV 601 650 ENSP00000375951/1-1199 EKLPWEQRKL LRWKMSTVTP NIVKQTIGRS HFKISKRNDD WLGCWGHHMK ENSBTAP00000024502/1-1199 EKLPWEQRKL LRWKMSTVTP NIVKQTIGRS HFKISKRNDD WLGCWGHHMK ENSTTRP00000001981/1-1193 EKLPWEQRKL LRWKMSTVTP NIVKQTIGRS HFKISKR-DD WLGCWGHHMK bmy_13360T0/1-1199 EKLPWEQRKL LRWKMSTVTP NIVKQTIGRS HFKISKRNDD WLGCWGHHMK BACU012710/1-1199 EKLPWEQRKL LRWKMSTVTP NIVKQTIGRS HFKISKRNDD WLGCWGHHMK 651 700 ENSP00000375951/1-1199 SPSFRSIREH QKLNHFPGSF QIGRKDRLWR NLSRMQSRFG KKEFSFFPQS ENSBTAP00000024502/1-1199 SPSFRSIQEH QKLNHFPGSF QIGRKDRLWR NLSRMQSRFG KKEFSFFPQS ENSTTRP00000001981/1-1193 SPSFRSIQEH QKLNHFPGSF QIGRKDRLWR NLSRMQSRFG KKEFSFFPQS bmy_13360T0/1-1199 SPSFRSIQEH QKLNHFPGSF QIGRKDRLWR NLSRMQSRFG KKEFSFFPQS BACU012710/1-1199 SPSFRSIQEH QKLNHFPGSF QIGRKDRLWR NLSRMQSRFG KKEFSFFPQS 701 750 ENSP00000375951/1-1199 FILPQDAKLL RKAWESSSRQ KWIVKPPASA RGIGIQVIHK WSQLPKRRPL ENSBTAP00000024502/1-1199 FILPQDAKLL RKAWESGSRQ KWIVKPPASA RGIGIQVIHK WSQLPKRRPL ENSTTRP00000001981/1-1193 FILPQDAKLL RKAWESSSRQ KWIVKPPASA RGIGIQVIHK WSQLPKRRPL bmy_13360T0/1-1199 FILPQDAKLL RKAWESSSRQ KWIVKPPASA RGIGIQVIHK WSQLPKRRPL BACU012710/1-1199 FILPQDAKLL RKAWESSSRQ KWIVKPPASA RGIGIQVIHK WSQLPKRRPL 751 800 ENSP00000375951/1-1199 LVQRYLHKPY LISGSKFDLR IYVYVTSYDP LRIYLFSDGL VRFASCKYSP ENSBTAP00000024502/1-1199 LVQRYLHKPY LISGSKFDLR IYVYVTSYDP LRIYLFSDGL VRFASCKYSP ENSTTRP00000001981/1-1193 LVQRYLHKPY LISGSKFDLR IYVYVTSYDP LRIYLFSDGL VRFASCKYSP bmy_13360T0/1-1199 LVQRYLHKPY LISGSKFDLR IYVYVTSYDP LRIYLFSDGL VRFASCKYSP BACU012710/1-1199 LVQRYLHKPY LISGSKFDLR IYVYVTSYDP LRIYLFSDGL VRFASCKYSP 801 850 ENSP00000375951/1-1199 SMKSLGNKFM HLTNYSVNKK NAEYQANADE MACQGHKWAL KALWNYLSQK ENSBTAP00000024502/1-1199 SMKSLGNKFM HLTNYSVNKK NAEYQANEDE TACQGHKWAL KALWSYLSQK ENSTTRP00000001981/1-1193 SMKSLGNKFM HLTNYSVNKK NAEYQANEDE TACQGHKWAL KALWSYLSQK bmy_13360T0/1-1199 SMKSLGNKFM HLTNYSVNKK NAEYQANEDE TACQGHKWAL KALWSYLSQK BACU012710/1-1199 SMKSLGNKFM HLTNYSVRKK NADYQANEDE TACQGHKWAL KALWSYLSQK 851 900 ENSP00000375951/1-1199 GVNSDAIWEK IKDVVVKTII SSEPYVTSLL KMYVRRPYSC HELFGFDIML ENSBTAP00000024502/1-1199 GVNSDAIWEK IKDVVVKTII SSEPYVTSLL KMYVRRPYSC HELFGFDVML ENSTTRP00000001981/1-1193 GVNSDAIWEK IKDVVVKTII SSEPYVTSLL KMYVRRPYSC HELFGFDIML bmy_13360T0/1-1199 GVNSDAIWEK IKDVVVKTII SSEPYVTSLL KMYVRRPYSC HELFGFDIML BACU012710/1-1199 GVNSDAIWEK IKDVVVKTII SSEPYVTSLL KMYVRRPYSC HELFGFDIML 901 950 ENSP00000375951/1-1199 DENLKPWVLE VNISPSLHSS SPLDISIKGQ MIRDLLNLAG FVLPNAEDII ENSBTAP00000024502/1-1199 DEKLKPWVLE VNISPSLHSN SPLDISIKGQ MIRDLLNLAG FVLPNADDIA ENSTTRP00000001981/1-1193 DENLKPWVLE VNISPSLHSS SPLDISIKGQ MIRDLLNLAG FVLPSAEDIA bmy_13360T0/1-1199 DENLKPWVLE VNISPSLHSN SPLDISIKGQ MIRDLLNLAG FVLPSAEDIA BACU012710/1-1199 DENLKPWVLE VNISPSLHSN SPLDISIKGQ MIRDLLNLAG FVLPSTEDIA 951 1000 ENSP00000375951/1-1199 SSPSSCSSST TSLPTSPGDK CRMAPEHVTA QKMKKAYYLT QKIPDQDFYA ENSBTAP00000024502/1-1199 SSSSSSSSST TSLPSSPRDR CRVAPEYFTA QKMKKAYYLT QKIPDQDFYA ENSTTRP00000001981/1-1193 SSSSSSSSST ASLPSSPRDR CRMAPEYFTA QKMKKAYYLT QKIPDQDFYS bmy_13360T0/1-1199 SSSSSSTSST TSLPSSPRDR CRMAPEYFTA QKMKKAYYLT QQIPDQDFYS BACU012710/1-1199 SSSSSSTSST TSLPSSPRDR CRMAPEYFTA QKMKKAYYLT QKIPDQDFYS 1001 1050 ENSP00000375951/1-1199 SVLDVLTPDD VRILVEMEDE FSRRGQFERI FPSHISSRYL RFFEQPRYFN ENSBTAP00000024502/1-1199 SVLDVLTPDD VRVLVEMEDE FSRRGQFERI FPSRISSRYL RFFEQPRYFN ENSTTRP00000001981/1-1193 SVLDVLTPDD VRVLVEMEDE FSRRGQFERI FPSRISSRYL RFFEQPRYFN bmy_13360T0/1-1199 SVLDVLTPDD VRVLVEMEDE FSRRGQFERI FPSRISSRYL RFFEQPRYFN BACU012710/1-1199 SVLDVLTPDD VRVLVEMEDE FSRRGQFERI FPSRISSRYL RFFEQPRYFN 1051 1100 ENSP00000375951/1-1199 ILTTQWEQKY HGNKLKGVDL LRSWCYKGFH MGVVSDSAPV WSLPTSLLTI ENSBTAP00000024502/1-1199 ILTTQWEQKY HGNKLKGVDL LRSWCYKGFH TGAISDSAPV WTLPASVLTV ENSTTRP00000001981/1-1193 ILTTQWEQKY HGNKLKGVDL LRSWCYKGFH TGSISDSAPV WTLPTSILTV bmy_13360T0/1-1199 ILTTQWEQKY HGNKLRGVDL LRSWCYKGFH TGAISDSAPV WTLPTSILTV BACU012710/1-1199 ILTTQWEQKY HGNKLKGVDL LRSWCYKGFH TGAISDSAPV WTLPTSILTV 1101 1150 ENSP00000375951/1-1199 SKDDVILNAF SKSETSKLGK QSSCEVSLLL SEDGTTPKSK KTQAGLSPYP ENSBTAP00000024502/1-1199 PKADATLSDF SKPETVKLRK HGSTERNIPL SEDGTMPKLK KTQAGLSSPP ENSTTRP00000001981/1-1193 PKGDVTLNDF SKSETGKLGK HGSSKGSIPL SGDGTMPKPT KTQAGLSPLP bmy_13360T0/1-1199 PKGDATLNDF SKSETGKLGK HGSSKGSIPL SEDGTMPKPT KTQAGLSPFP BACU012710/1-1199 PKGDATLNDF SKSETGKLGK HGSSKGSIPL SEDGTMPKPT KTQAGLSPFP 1151 1200 ENSP00000375951/1-1199 QKPSSSKDSE DTSKEPSLST QTLPVIKCSG QTSRLSASST FQSISDSLLA ENSBTAP00000024502/1-1199 RKLSSSEDSE DTSKEPSLST QLLPVIKFSG QTSRLSASTS SQSAGGSLLA ENSTTRP00000001981/1-1193 RKPSSSKDSE DTSKEPSLST QTLPLIKYSG QTSRLSASST SQSAGDSLLA bmy_13360T0/1-1199 RKPSSSKDSE DTSKEPSLST QTLPLIKYSG QTSRLSASPT SQSAGDSLLA BACU012710/1-1199 RKPSSSKDSE DTSKEPSLST QTLPLIKYSG QTSRLSASPT SQSAGDSLLA 1201 1250 ENSP00000375951/1-1199 VSP- ENSBTAP00000024502/1-1199 AVSL ENSTTRP00000001981/1-1193 AVSL bmy_13360T0/1-1199 AVSL BACU012710/1-1199 AVSL