KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:23 2014 Check: 00 .. Name: ENSP00000371318/1-256 Len: 295 Check: 3826 Weight: 1.00 Name: ENSBTAP00000024507/1-295 Len: 295 Check: 7191 Weight: 1.00 Name: ENSTTRP00000009617/1-157 Len: 295 Check: 9964 Weight: 1.00 Name: bmy_08911T0/1-232 Len: 295 Check: 7855 Weight: 1.00 Name: BACU015614/1-260 Len: 295 Check: 2849 Weight: 1.00 // 1 50 ENSP00000371318/1-256 ---------- -MPPAQGY-- --EFA----- ---------- --------AA ENSBTAP00000024507/1-295 SRRPRRPRAE LEPRRSAIPG SRPFPVPPSP EPPWRSQPPP YGPARREQAT ENSTTRP00000009617/1-157 ---------- -MPLVQEC-- --GFA----- ---------- --------AA bmy_08911T0/1-232 ---------- ---------- ---------- ---------- ---------- BACU015614/1-260 ---------- -MCQTRLCPG CQRYG----- ---------- --------AA 51 100 ENSP00000371318/1-256 KGPRDELGPS FPMASPPGLE LKTLSNGPQA PRRSAPLGPV APTREGVENA ENSBTAP00000024507/1-295 KGPRDELGSA FPMASPPGLE LKTLNNGPQA PRRPASLGPA APPRGGVENA ENSTTRP00000009617/1-157 QRPRDELGPA FPMASPPGLE LKTLSNGPQA PRRPASLGPA APRREGVENA bmy_08911T0/1-232 ---------- --MASPPGLE LKTLSNGPQA PRRPAPLGPA APRREGVENA BACU015614/1-260 KRPRDELGPA FPMASPPGLE LKTLSNGPQA PRRPGPLGPA APRREGVENA 101 150 ENSP00000371318/1-256 CFSSEEHETH FQNPGNTRLG SSPSPPGGV- SSLPRSQRDD LSLHSEEGPA ENSBTAP00000024507/1-295 CFSSEEHETH FQDPGDTRLG RSPSLPGGLG PSRPRPQRDD ASLHSEEGPG ENSTTRP00000009617/1-157 CFFAEEHETH FQNPRDARLG SSPSPPEGV- PSWPRSQRDD LSLRSEEGPG bmy_08911T0/1-232 CFFSEEHETH FQNPGDARLC SSPSPPEGV- PSWPRSQRDD LSLRSEEGPG BACU015614/1-260 CFFSEEHETH FQNPGDARLC SSPSPPEGI- PSWPRSQRDA LSLRSEEGPG 151 200 ENSP00000371318/1-256 LEPVSRPVDY GFVSALVFLV SGILLVVTAY AIPREARVNP DTVTAREMER ENSBTAP00000024507/1-295 LEPVSRPVDY GFVSALVFLV SGILLVVTAY AIPREARVNP DTVSAREMER ENSTTRP00000009617/1-157 LQPVSRPVDY GFVSALVFLV SGILLVVTAY TIPREARVNP DTVSAR---- bmy_08911T0/1-232 LEPVSRPVDY GFVSALVFLV SGILLVVTAY AIPREARVNP DTVSAREMER BACU015614/1-260 LEPVSRPVDY GFVSALVFLV SGILLVVTAY AIPREARVNP DTVSAREMER 201 250 ENSP00000371318/1-256 LEMYYARLGS HLDRCIIAGL GLLTVGGMLL SVLLMVSLCK GELYRRRTFV ENSBTAP00000024507/1-295 LEMYYARLGS HLDKCIIAGL GLLTVGGMLL SVLLMVSLCK GELYRRPTFV ENSTTRP00000009617/1-157 ---------- ---------- ---------- ---------- ---------- bmy_08911T0/1-232 LEMYYAHLGS HLDKCIIAGL GLLTVGGMLL SVLLMVSLCK GELYRRPNFV BACU015614/1-260 LEMYYARLGS HLDKCIIAGL GLLTVGGMLL SVLLMVSLCK GELYRRPNFV 251 300 ENSP00000371318/1-256 PGKGSRKTYG SINLRMRQLN GDGGQALVEN EVVQVSETSH TLQRS ENSBTAP00000024507/1-295 PGRGSRKTYG SINLRMRQLH GDGGQALVEN EVVQVSETSH ALQGS ENSTTRP00000009617/1-157 ---------- ---------- ---------- ---------- ----- bmy_08911T0/1-232 PGRGSRKTYG SINLRMRQLS GDGSQALVEN EVVQVSETSR TLQGS BACU015614/1-260 PGRGSRKTYG SINLRMRQLS GDGSQALVEN EVVQVSETSR TLQGS