KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:24 2014 Check: 00 .. Name: ENSP00000442563/1-485 Len: 502 Check: 2055 Weight: 1.00 Name: ENSBTAP00000024509/1-485 Len: 502 Check: 3089 Weight: 1.00 Name: BACU006118/1-501 Len: 502 Check: 9218 Weight: 1.00 Name: ENSTTRP00000008317/1-482 Len: 502 Check: 5939 Weight: 1.00 Name: bmy_06551T0/1-438 Len: 502 Check: 3494 Weight: 1.00 // 1 50 ENSP00000442563/1-485 MRSRVAVRAC HKVCRCLLSG FGGRVDAGQP ELLTERSSPK GGHVKSHAEL ENSBTAP00000024509/1-485 MRSAPAIRAC QRICRCLLSG FGGQVDGRQP EQLSKGTGSF VGPVRSQAEL BACU006118/1-501 MRSGAAVRAG RKVCRCLLSG Y-SRVDGGQP EQLTGGSGSF VGPLRSHAEP ENSTTRP00000008317/1-482 MRCGAAVRAG QKVCRCLLSG F-SRVDGRQ- --LTEGSGSF VGPLRSHGEL bmy_06551T0/1-438 MRSGAAVRAG QKVCRCLLSG Y-SRVDGGQP EQLTGGSGSF VGPLRSHAEL 51 100 ENSP00000442563/1-485 EGNGEHPEAP GS-GEGSEAL LEICQRRHFL SGSKQQLSRD SLLSGCHPGF ENSBTAP00000024509/1-485 PRN-EPREAP ESGGEGSEPL VEICRKRRFL SGTKQQLSRD SLLNGCHPGL BACU006118/1-501 PPVSEPREGP ESGGEESEAL VEICQKRRFL SGTKRQLSRD SLLSGCHPGL ENSTTRP00000008317/1-482 PPVSELREGP ESGGEESEVL VEICQKRRFL SGTKRQLSRD SLLSGCHPGL bmy_06551T0/1-438 PPVSEPREGP ESGGEESEAL VEICQKRRFL SGTKRQLSRD SLLSGCHPGL 101 150 ENSP00000442563/1-485 GPLGVELRKN LAAEWWTSVV VFREQVFPVD ALHHKPGPLL PGDSAFRLVS ENSBTAP00000024509/1-485 GPLGIELRKN LAAEWWSSVV VFREQVFPVD ALHREPGPSL PVDNGFRLVS BACU006118/1-501 GPLGIELRKN LAAEWWSSVV VFREQVFPVD ALHREPGPSL PGDSAFRLVS ENSTTRP00000008317/1-482 GPLGIELRKN LAAEWWSAVV VFREQVFPVD ALYHEPGPSL PGDSAFRLVS bmy_06551T0/1-438 GPLGIELRKN LATEWWSSVV VFREQVFPVD ALHHEPGPSL PGDSAFRLVS 151 200 ENSP00000442563/1-485 AETLREILQD KELSKEQLVA FLENVLKTSG KLRENLLHGA LEHYVNCLDL ENSBTAP00000024509/1-485 AETLREILQD KELSKEQLVA FLENLLNTSG KLRENLLHGA LEHYVSYLDL BACU006118/1-501 AETLREILQD KELSKEQLGA FLENLLKTSG KLRENLLHGA LQHYVNYLDL ENSTTRP00000008317/1-482 AETLREILQD KELSKEQLGA FLENLLKTSG KLRENLLHGA LEHYVNYLDL bmy_06551T0/1-438 AETLREILQD KELSKEQLGA FLENLLKTSG KLRENLLHGA LQHYVNYLDL 201 250 ENSP00000442563/1-485 VNKRLPYGLA QIGVCFHPVF DTKQIRNGVK SIGEKTEASL VWFTPPRTSN ENSBTAP00000024509/1-485 VNKRLPFGLA QIGACFHPVS DTKQTPDGVK RIGEKTEASL VWFTSARTAS BACU006118/1-501 INKRLPFGLA QIGVCFHPVS DTKQTPDGVK RIGEKTEASL VWFTSARTAS ENSTTRP00000008317/1-482 LNKRLPFGLA QIGVCFHPVS DTKQTPDGVK RIGEKTEASL VWFTSARTAS bmy_06551T0/1-438 INRRLPFGLA QIGVCFHPVS DTKQTPDGVK RIGEKTEASL VWFTSARTAS 251 300 ENSP00000442563/1-485 QWLDFWLRHR LQWWRKFAMS PSNFSSSDCQ DEEGRKGNKL YYNFPWGKEL ENSBTAP00000024509/1-485 QWLDFWLRHR LLWWRKFAMS PSNFSSGDCQ DEAGRKGNRL YYNFPWGKEP BACU006118/1-501 QWLDFWLRHR LLWWRKFAVS PSNFSSSDCQ DEAGQKGNKL YYNFPWGKEP ENSTTRP00000008317/1-482 QWLDFWLRHR LLWWRKFAVS PSNFSSSDCQ DEAGRKGNKL YYNFPWGKEP bmy_06551T0/1-438 QWLDFWLRHR LLWWRKFAVS PSNFSSSDCQ DEAGQKGNKL YYNFPWGKEP 301 350 ENSP00000442563/1-485 IETLWNLGDH ELLHMYPGNV SKLHGRDGRK NVVPCVLSVN GDLDRGMLAY ENSBTAP00000024509/1-485 IETLWNLGDH ELLHMYPGSV AQVHGRDGRK NVVPSVLSIN GDLDRGMLAY BACU006118/1-501 IETLWNLGDH ELLHMYPENV AQLHGRDGRK NVVPSVLSIN GDLDRGMLAY ENSTTRP00000008317/1-482 IETLWNLGDH ELLRMYPENV AQLHGRDGRK NVVPSVLSIN GDLDRGMLAY bmy_06551T0/1-438 IETLWNLGDH ELLHMYPENV AQLH------ ---------- ---------- 351 400 ENSP00000442563/1-485 LYDSFQLTEN SFTRKKNLHR KVLKLHPCLA PIKVALDVGR GPTLELRQVC ENSBTAP00000024509/1-485 LYDSFQLTEN SFTRKKDLHR KVLKLHPCLA PIKAALDVGR GPTVELRQVC BACU006118/1-501 LYDSFQLTEN SFTRRKDLHR KVLKLHPCLA PIKVALDVGR GPTVELRQVC ENSTTRP00000008317/1-482 LYDSFQLTEN SFTRKKDLHR KVLKLHPCLA PIKVALDVGR GPTVELRQVC bmy_06551T0/1-438 ---------- ---------- -VLKLHPCLA PIKVALDVGR GPTVELRQVC 401 450 ENSP00000442563/1-485 QGLFNELLEN GISVWPGYLE TMQSSLEQLY SKYDEMSILF TVLVTETTLE ENSBTAP00000024509/1-485 QGLFNELLEN GISVWPGYLE TVQSSLEQLY SKYDEMSILF TVLITEATLE BACU006118/1-501 QGLFNELLEN GISVWPGYLE TVPSSLEQLY SKYDEMSILF TVLITEATLE ENSTTRP00000008317/1-482 QGLFNELLEN GISVWPGYLE TVPSSLEQLY SKYDEMSILF TVLITEATLE bmy_06551T0/1-438 QGLFNELLEN GISVWPGYLE TVPSSLEQLY SKYDEMSILF TVLITEATLE 451 500 ENSP00000442563/1-485 NGLIHLRSRD TTMKEMMHIS K-LKDFLIKY ISSAKNV--- ---------- ENSBTAP00000024509/1-485 NGLIQLRSRD TTMKEMMHIS K-VKDFLTKY ISSAKNV--- ---------- BACU006118/1-501 NGLIHLRSRD TTMKEMMHIS KGPQPSQEDC IPGLRSADCT NWQHGMSILQ ENSTTRP00000008317/1-482 NGLIHLRSRD TTMKETMHIS K-VKDFLTKY ISSAKNV--- ---------- bmy_06551T0/1-438 NGLIHLRSRD TTMKEMMHIS K-VKDFLTKY ISSAKNV--- ---------- 501 550 ENSP00000442563/1-485 -- ENSBTAP00000024509/1-485 -- BACU006118/1-501 LR ENSTTRP00000008317/1-482 -- bmy_06551T0/1-438 --