KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:23:24 2014 Check: 00 .. Name: ENSP00000216274/1-518 Len: 527 Check: 6901 Weight: 1.00 Name: ENSBTAP00000024511/1-506 Len: 527 Check: 4867 Weight: 1.00 Name: bmy_16956T0/1-259 Len: 527 Check: 1760 Weight: 1.00 Name: ENSTTRP00000008191/1-502 Len: 527 Check: 4857 Weight: 1.00 // 1 50 ENSP00000216274/1-518 MSCVKLWPSG APAPLVSIEE LENQELVGKG GFGTVFRAQH RKWGYDVAVK ENSBTAP00000024511/1-506 MSGSTLWPSG ASAPLVPIEE LENPELIGKG GFGSVFRAHH RSWGVEVAVK bmy_16956T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008191/1-502 -------HSG TSAPLVPIEE VENPEFMGRG GFGAVFRAQH RTWGFEVAVK 51 100 ENSP00000216274/1-518 IVNSKAISRE VKAMASLDNE FVLRLEGVIE KVNWDQDPKP ALVTKFMENG ENSBTAP00000024511/1-506 IVNSRAISRE VKAMSSLRNT NVLPLLGVTE KLVWEYVSGP ALVTPFMENG bmy_16956T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008191/1-502 IVNSPAISRE VKAMASLCNN HVLPLLGVTK KLEWEDVSGP ALVTQFMEN- 101 150 ENSP00000216274/1-518 SLSGLLQSQC PRPWPLLCRL LKEVVLGMFY LHDQNPVLLH RDLKPSNVLL ENSBTAP00000024511/1-506 SLAVLLQPRC PRPWPLLCQL LQELVLGMCY LHSQNPVLLH RDLKPSNVLL bmy_16956T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008191/1-502 SLAVLLQPQC PRPGPLLCRL LQDLVLGMCY LHSQNPMLLH RDLKPPNVLL 151 200 ENSP00000216274/1-518 DPELHVKLAD FGLSTFQGGS QSGTGSGEPG GTLGYLAPEL FVNVNRKAST ENSBTAP00000024511/1-506 DSELHAKVAD FGLSTFQGGS QSGAGSGESG CTPAYLAPEL LANINQKASR bmy_16956T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008191/1-502 DSELHAKLED -GLSTFLGVS QTGAGSGESG STPAYLAPEL LADINWKASM 201 250 ENSP00000216274/1-518 ASDVYSFGIL MWAVLAGREV ELPT-EPSLV YEAVCNRQNR PSLAELPQAG ENSBTAP00000024511/1-506 ASDVYSFGIL TWAVLAGREA EILVPQTSLV REAVCERQIR PPLTELPPSG bmy_16956T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008191/1-502 ASDVYSFGIL MWAVLARREA EMWT--VSLQ REAVCERQIR PALTELPQSG 251 300 ENSP00000216274/1-518 PETPGLEGLK ELMQLCWSSE PKDRPSFQEC LPKTDEVFQM VE------NN ENSBTAP00000024511/1-506 PETPGLEELT DLMQKCWSHE PQKRPSFQEC RINTKKALDL VNKGDVSGRK bmy_16956T0/1-259 ---------- --MQHCWSHE PQKRPSFQEC RPNTQKVLDL VKKGDVSGKK ENSTTRP00000008191/1-502 PE-PGLEVLK DLMQHCWSHK PQKRPSF-EC RPNTQKVLDL VK------KK 301 350 ENSP00000216274/1-518 MNAAVSTVKD FLSQLRSSNR RFSIPESGQG GTEMDGFRRT IENQHSRNDV ENSBTAP00000024511/1-506 MNAAVFMVKE FLSEHRGSN- -----SPGLE RTEIDSPRET TGSH----DS bmy_16956T0/1-259 MNAAVSTVKE FLSEHRGSSR LLSVLKPGPE STEMDGPGGT TGSH----DS ENSTTRP00000008191/1-502 MNAAVSPVKE FLSEHRGSSR LLSVLKPGPE STEMDGPGGT TGSH----DS 351 400 ENSP00000216274/1-518 MVSEWLNKLN LEEPPSSVPK KCPSLTKRSR AQEEQVPQAW TAGTSSDSMA ENSBTAP00000024511/1-506 LVSEMMN-LN LEGCPSSVPE KCTNLLESIG VQREQVPPAW TAETSSDSTA bmy_16956T0/1-259 MVSEMMN-LN LEGYPRSVPE KCTNLPESIR AQRRQVQPAW TAETSSDSTA ENSTTRP00000008191/1-502 MVSEMMN-LN LEGYPRSVPE KCTNLPESIR AQRGQVQPAW TAETSSDSKA 401 450 ENSP00000216274/1-518 QPPQTPETST FRNQMPSPTS TGTPSPGPRG NQGAERQGMN WSCRTPEPNP ENSBTAP00000024511/1-506 RPPQTPETLP FRTQNPCPTS AWTPGPGPQG SQGAERCDTN WPPRGPAPNL bmy_16956T0/1-259 RPPQNPETLP VKNQKPSPTS AWTPGPGPQG YQGAERRDTN WPPRAPGPNP ENSTTRP00000008191/1-502 QPPQNPETLP VRNQKPSPTS AWTPGPGPQG YQGAERRDTN WPPRAPGPNP 451 500 ENSP00000216274/1-518 VTGRPLVNIY NCSGVQVGDN NYLTMQQTTA LPTWGLAPSG KGRGLQHPPP ENSBTAP00000024511/1-506 VPGPWFPTIF NCQGVQIGNN NRLIIQGGTA LSTKGVAPGG VDRGPQCTPQ bmy_16956T0/1-259 VPGPRFPTIL HSQGVQIGNN NHMITQERTA SSVQGLAPRG LDRGPQRTPQ ENSTTRP00000008191/1-502 VPGPRFPTVL HSQGVQIGNN NHMIIQGRTA SSLQGLAPRG MDRGPQHTPQ 501 550 ENSP00000216274/1-518 -VGSQEGPKD PEAWSRPQGW YNHSGK- ENSBTAP00000024511/1-506 GRSSKEGPQE PEAWSGP--- ------- bmy_16956T0/1-259 GIGSKEGRQE PEAWSGPQGW YHNSRN- ENSTTRP00000008191/1-502 GTGSKEGQQE PE-WSGPQGW YHNSRNR