KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:25 2014 Check: 00 .. Name: bmy_06552T0/1-602 Len: 668 Check: 3978 Weight: 1.00 Name: BACU006117/1-563 Len: 668 Check: 3350 Weight: 1.00 Name: ENSP00000225792/1-614 Len: 668 Check: 8527 Weight: 1.00 Name: ENSBTAP00000024514/1-614 Len: 668 Check: 8527 Weight: 1.00 Name: ENSTTRP00000008362/1-614 Len: 668 Check: 8332 Weight: 1.00 // 1 50 bmy_06552T0/1-602 MADSGTPAGH RFLSSPFFRR CRPRKASPSP EPLPATRRTR FSPLRFPPTA BACU006117/1-563 ---------- ---------- ---------- ---------- ---------- ENSP00000225792/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024514/1-614 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008362/1-614 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_06552T0/1-602 TIDAMSGYSS DRDRGRDRGF GAPRFGGSRA GPLSGKKFGN PGEKLVKKKW BACU006117/1-563 ----MSGYSS DRDRGRDRGF GAPRFGGSRA GPLSGKKFGN PGEKLVKKKW ENSP00000225792/1-614 ----MSGYSS DRDRGRDRGF GAPRFGGSRA GPLSGKKFGN PGEKLVKKKW ENSBTAP00000024514/1-614 ----MSGYSS DRDRGRDRGF GAPRFGGSRA GPLSGKKFGN PGEKLVKKKW ENSTTRP00000008362/1-614 ----MSGYSS DRDRGRDRGF GAPRFGGSRA GPLSGKKFGN PGEKLVKKKW 101 150 bmy_06552T0/1-602 NLDELPKFEK NFYQEHPDLA RRTAQEVETY RRSKEITVRG HNCPKPVLNF BACU006117/1-563 NLDELPKFEK NFYQEHPDLA RRTAQEVETY RRSKEITVRG HNCPKPVLNF ENSP00000225792/1-614 NLDELPKFEK NFYQEHPDLA RRTAQEVETY RRSKEITVRG HNCPKPVLNF ENSBTAP00000024514/1-614 NLDELPKFEK NFYQEHPDLA RRTAQEVETY RRSKEITVRG HNCPKPVLNF ENSTTRP00000008362/1-614 NLDELPKFEK NFYQEHPDLA RRTAQEVETY RRSKEITVRG HNCPKPVLNF 151 200 bmy_06552T0/1-602 YEANFPANVM DVIARQNFTE PTAIQAQGWP VALSGLDMVG VAQTGSGKTL BACU006117/1-563 YEANFPANVM DVIARQNFTE PTAIQAQGWP VALSGLDMVG VAQTGSGKTL ENSP00000225792/1-614 YEANFPANVM DVIARQNFTE PTAIQAQGWP VALSGLDMVG VAQTGSGKTL ENSBTAP00000024514/1-614 YEANFPANVM DVIARQNFTE PTAIQAQGWP VALSGLDMVG VAQTGSGKTL ENSTTRP00000008362/1-614 YEANFPANVM DVIARQNFTE PTAIQAQGWP VALSGLDMVG VAQTGSGKTL 201 250 bmy_06552T0/1-602 SYLLPAIVHI NHQPFLERGD GPICLVLAPT RELAQQVQQV AAEYCRACRL BACU006117/1-563 SYLLPAIVHI NHQPFLERGD GPICLVLAPT RELAQQVQQV AAEYCRACRL ENSP00000225792/1-614 SYLLPAIVHI NHQPFLERGD GPICLVLAPT RELAQQVQQV AAEYCRACRL ENSBTAP00000024514/1-614 SYLLPAIVHI NHQPFLERGD GPICLVLAPT RELAQQVQQV AAEYCRACRL ENSTTRP00000008362/1-614 SYLLPAIVHI NHQPFLERGD GPICLVLAPT RELAQQVQQV AAEYCRACRL 251 300 bmy_06552T0/1-602 KSTCIYGGAP KGPQIRDLER GVEICIATPG RLIDFLECGK TNLRRTTYLV BACU006117/1-563 KSTCIYGGAP KGPQIRDLER GVEICIATPG RLIDFLECGK TNLRRTTYLV ENSP00000225792/1-614 KSTCIYGGAP KGPQIRDLER GVEICIATPG RLIDFLECGK TNLRRTTYLV ENSBTAP00000024514/1-614 KSTCIYGGAP KGPQIRDLER GVEICIATPG RLIDFLECGK TNLRRTTYLV ENSTTRP00000008362/1-614 KSTCIYGGAP KGPQIRDLER GVEICIATPG RLIDFLECGK TNLRRTTYLV 301 350 bmy_06552T0/1-602 LDEADRMLDM GFEPQIRKIV DQIR------ ---------- ---------- BACU006117/1-563 LDEADRMLDM GFEPQIRKIV DQIR------ ---------- ---------- ENSP00000225792/1-614 LDEADRMLDM GFEPQIRKIV DQIRPDRQTL MWSATWPKEV RQLAEDFLKD ENSBTAP00000024514/1-614 LDEADRMLDM GFEPQIRKIV DQIRPDRQTL MWSATWPKEV RQLAEDFLKD ENSTTRP00000008362/1-614 LDEADRMLDM GFEPQIRKIV DQIRPDRQTL MWSATWPKEV RQLAEDFLKD 351 400 bmy_06552T0/1-602 ---------- ---------K KDSC-GLFKD QRLIRLMEEI MSEKENKTIV BACU006117/1-563 ---------- ---------I VDVCHDVEKD EKLIRLMEEI MSEKENKTIV ENSP00000225792/1-614 YIHINIGALE LSANHNILQI VDVCHDVEKD EKLIRLMEEI MSEKENKTIV ENSBTAP00000024514/1-614 YIHINIGALE LSANHNILQI VDVCHDVEKD EKLIRLMEEI MSEKENKTIV ENSTTRP00000008362/1-614 YIHINIGALE LSANHNILQI VDVCHDVEKD EKLIRLMEEI MSEKENKTIV 401 450 bmy_06552T0/1-602 FVETKRRCDE LTRKMRRDGW PAMGIHGDKS QQERDWVLN- ---------- BACU006117/1-563 FVETKRRCDE LTRKMRRDGW PAMGIHGDKS QQEQ------ FKHGKAPILI ENSP00000225792/1-614 FVETKRRCDE LTRKMRRDGW PAMGIHGDKS QQERDWVLNE FKHGKAPILI ENSBTAP00000024514/1-614 FVETKRRCDE LTRKMRRDGW PAMGIHGDKS QQERDWVLNE FKHGKAPILI ENSTTRP00000008362/1-614 FVETKRRCDE LTRKMRRDGW PAMGIHGDKS QQERDWVLNE FKHGKAPILI 451 500 bmy_06552T0/1-602 ---------D VEDVKFVINY DYPNSSEDYI HRIGRTARST KTGTAYTFFT BACU006117/1-563 ATDVASRGLD VEDVKFVINY DYPNSSEDYI HRIGRTARST KTGTAYTFFT ENSP00000225792/1-614 ATDVASRGLD VEDVKFVINY DYPNSSEDYI HRIGRTARST KTGTAYTFFT ENSBTAP00000024514/1-614 ATDVASRGLD VEDVKFVINY DYPNSSEDYI HRIGRTARST KTGTAYTFFT ENSTTRP00000008362/1-614 ATDVASRGLD VEDVKFVINY DYPNSSEDYI HRIGRTARST KTGTAYTFFT 501 550 bmy_06552T0/1-602 PNNIKQVSDL ISVLREANQA INPKLLQLVE DRGSGRSRGR GGMKDDRRDR BACU006117/1-563 PNNIKQVSDL ISVLREANQA INPKLLQLVE DRGSGRSRGR GGMKDDRRDR ENSP00000225792/1-614 PNNIKQVSDL ISVLREANQA INPKLLQLVE DRGSGRSRGR GGMKDDRRDR ENSBTAP00000024514/1-614 PNNIKQVSDL ISVLREANQA INPKLLQLVE DRGSGRSRGR GGMKDDRRDR ENSTTRP00000008362/1-614 PNNIKQVSDL ISVLREANQA INPKLLQLVE DRGSGRSRGR GGMKDDRRDR 551 600 bmy_06552T0/1-602 YSAGKRGGFN TFRDRENYDR GYSSLLKRDF GAKTQNGVYS AANYTNGSFG BACU006117/1-563 YSAGKRGGFN TFRDRENYDR GYSSLLKRDF GAKTQNGVYS AANYTNGSFG ENSP00000225792/1-614 YSAGKRGGFN TFRDRENYDR GYSSLLKRDF GAKTQNGVYS AANYTNGSFG ENSBTAP00000024514/1-614 YSAGKRGGFN TFRDRENYDR GYSSLLKRDF GAKTQNGVYS AANYTNGSFG ENSTTRP00000008362/1-614 YSAGKRGGFN TFRDRENYDR GYSSLLKRDF GAKTQNGVYS AANYTNGSFG 601 650 bmy_06552T0/1-602 SNFVSAGIQT SFRTGNPTGT YQNGYDSTQQ YGSNVPNMHN GMNQQAYAYP BACU006117/1-563 SNFVSAGIQT SFRTGNPTGT YQNGYDSTQQ YGSNVPNMHN GMNQQAYAYP ENSP00000225792/1-614 SNFVSAGIQT SFRTGNPTGT YQNGYDSTQQ YGSNVPNMHN GMNQQAYAYP ENSBTAP00000024514/1-614 SNFVSAGIQT SFRTGNPTGT YQNGYDSTQQ YGSNVPNMHN GMNQQAYAYP ENSTTRP00000008362/1-614 SNFVSAGIQT SFRTGNPTGT YQNGYDSTQQ YGSNVANMHN GMNQQAYAYP 651 700 bmy_06552T0/1-602 ATAAAPMIGY PMPTGYSQ BACU006117/1-563 ATAAAPMIGY PMPTGYSQ ENSP00000225792/1-614 ATAAAPMIGY PMPTGYSQ ENSBTAP00000024514/1-614 ATAAAPMIGY PMPTGYSQ ENSTTRP00000008362/1-614 ATAAAPMIGY PMPTGYSQ