KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:26 2014 Check: 00 .. Name: bmy_05310T0/1-346 Len: 384 Check: 702 Weight: 1.00 Name: ENSP00000219313/1-324 Len: 384 Check: 2714 Weight: 1.00 Name: ENSBTAP00000024515/1-322 Len: 384 Check: 6490 Weight: 1.00 Name: BACU015431/1-298 Len: 384 Check: 9522 Weight: 1.00 Name: ENSTTRP00000013297/1-322 Len: 384 Check: 9584 Weight: 1.00 // 1 50 bmy_05310T0/1-346 NRKGRSRAWR IAENRCCSGR RCLRVAGSRA WRAGCVAMPE LAVQKVVVHP ENSP00000219313/1-324 ---------- ---------- ---------- -------MPE LAVQKVVVHP ENSBTAP00000024515/1-322 ---------- ---------- ---------- -------MLE LAVQKVVVHP BACU015431/1-298 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013297/1-322 ---------- ---------- ---------- -------MPE LAVQKVVVHP 51 100 bmy_05310T0/1-346 LVLLSVVDHF NRIGKVGNQK RVVGVLLGSW QKKVLDVSNS FAVPFDEDDK ENSP00000219313/1-324 LVLLSVVDHF NRIGKVGNQK RVVGVLLGSW QKKVLDVSNS FAVPFDEDDK ENSBTAP00000024515/1-322 LVLLSVVDHF NRIGKVGNQK RVVGVLLGSW QKKVLDVSNS FAVPFDEDDK BACU015431/1-298 ---------- ---------- ---------- ------MSLS ITCPFDEDDK ENSTTRP00000013297/1-322 LVLLSVVDHF NRXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPFDEDDK 101 150 bmy_05310T0/1-346 DDSVWFLDHD YLENMYGMFK KVNARERIVG WYHTGPKLHK NDIAINELMK ENSP00000219313/1-324 DDSVWFLDHD YLENMYGMFK KVNARERIVG WYHTGPKLHK NDIAINELMK ENSBTAP00000024515/1-322 DDSVWFLDHD YLENMYGMFK KVNARERIVG WYHTGPKLHK NDIAINELMK BACU015431/1-298 DDSVWFLDHD YLENMYGMFK KVNAREIIVG WYHTGPKLHK NDITINELMK ENSTTRP00000013297/1-322 DDSVWFLDHD YLENMYGMFK KVNARERIVG WYHTGPKLHK NDIAINELMK 151 200 bmy_05310T0/1-346 RYCPNSVLVI IDVKPKDLGL PTEAYISVEE VHD-----SA PWHSVPAVW- ENSP00000219313/1-324 RYCPNSVLVI IDVKPKDLGL PTEAYISVEE VHDDGTPTSK TFEHVTSEIG ENSBTAP00000024515/1-322 RYCPNSVLVI IDVKPKDLGL PTEAYISVEE VHDDGTPTSK TFEHVTSEIG BACU015431/1-298 RYCPNSVLVI IDVKPKDLGL PTEAYISVEE VHNDGTPTSK TFEHVTSEIG ENSTTRP00000013297/1-322 RYCPNSVLVI IDVKPKDLGL PTEAYISVEE VHDDGTPTSK TFEHVTSEIG 201 250 bmy_05310T0/1-346 -------SVS LFLGDIKDTT VGTLSQRITN QVHGLKGLNS KLLDIRSYLE ENSP00000219313/1-324 AEEAEEVGVE HLLRDIKDTT VGTLSQRITN QVHGLKGLNS KLLDIRSYLE ENSBTAP00000024515/1-322 AEEAEEVGVE HLLRDIKDTT VGTLSQRITN QVHGLKGLNS KLLDIRGYLE BACU015431/1-298 AEEAEEVGVE HLLRDIKDTT VGTLSQQITN QVHGLKGLNS KLLDIRSYLE ENSTTRP00000013297/1-322 AEEAEEVGVE HLLRDIKDTT VGTLSQRITN QVHGLKGLNS KLLDIRSYLE 251 300 bmy_05310T0/1-346 KVATGKLPIN HQIIYQLQDV FNLLPDVSLQ EFVKAFYLKT NDQMVVVYLA ENSP00000219313/1-324 KVATGKLPIN HQIIYQLQDV FNLLPDVSLQ EFVKAFYLKT NDQMVVVYLA ENSBTAP00000024515/1-322 KVATGKLPIN HQIIYQLQDV FNLLPDVSLQ EFVKAFYLKT NDQMVVVYLA BACU015431/1-298 KVATGKLPIN HQIIYQMQDV FNLLPDVSLQ EFVKAFYLKT SDQMVVVYLA ENSTTRP00000013297/1-322 KVATGKLPIN HQIIYQLQDV FNLLPDVSLQ EFVKAFYLKT NDQMVVVYLA 301 350 bmy_05310T0/1-346 SLIRSVVALH NLINNKIANR DAEKKEGQEK EDSKKDRKDD KE--KDKEKS ENSP00000219313/1-324 SLIRSVVALH NLINNKIANR DAEKKEGQEK EESKKDRKED KEKDKDKEKS ENSBTAP00000024515/1-322 SLIRSVVALH NLINNKIANR DAEKKEGQEK EDSKKDRKDD KE--KEKEKS BACU015431/1-298 SLIRSVVALH NLINNKITNW DAEKKEGKEK EDGKKDRKDN KEKEKDKEKS ENSTTRP00000013297/1-322 SLIRSVVALH NLINNKIANR DAEKKEGQEK EDSKKDRKDD KE--KDKEKS 351 400 bmy_05310T0/1-346 DVKKEEKKEK K--------- ---------- ---- ENSP00000219313/1-324 DVKKEEKKEK K--------- ---------- ---- ENSBTAP00000024515/1-322 DVKKEEKKEK K--------- ---------- ---- BACU015431/1-298 DVKKEEKKEK KVAFCKLKSY KLKKKTGTVF TPLA ENSTTRP00000013297/1-322 DVKKEEKKEK K--------- ---------- ----