KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:27 2014 Check: 00 .. Name: ENSP00000266682/1-730 Len: 732 Check: 4889 Weight: 1.00 Name: ENSTTRP00000006809/1-732 Len: 732 Check: 8776 Weight: 1.00 Name: ENSBTAP00000024524/1-729 Len: 732 Check: 8975 Weight: 1.00 Name: bmy_07780T0/1-729 Len: 732 Check: 7250 Weight: 1.00 Name: BACU001002/1-729 Len: 732 Check: 8937 Weight: 1.00 // 1 50 ENSP00000266682/1-730 MPKNSKVVKR ELDDDVTESV KDLLSNEDAA DDAFKTSELI VDGQEEKDTD ENSTTRP00000006809/1-732 MPKNSKVVKR ELDDEVIESV KDLLSNEDSA DDAFKKSELI VDVQEEKDTD ENSBTAP00000024524/1-729 MPKNSKVVKR ELDDEVIESV KDLLSNEDSA DDAFKKSELI VDVPEEKDTD bmy_07780T0/1-729 MPKNSKVVKR ELDDEVIESV KDLLSNEDSA DDAFKKSELI VDVQEEKDTD BACU001002/1-729 MPKNSKVVKR ELDDEVIESV KDLLSNEDSA DDAFKKSELI VDVQEEKDTD 51 100 ENSP00000266682/1-730 VEEGSEVEDE RPAWNSKLQY ILAQVGFSVG LGNVWRFPYL CQKNGGGAYL ENSTTRP00000006809/1-732 VEEGSEVEDE RPAWNSKLQY ILAQVGFSVG LGNVWRFPYL CQKNGGXXXX ENSBTAP00000024524/1-729 VVERSEVKDA RPAWNSKLQY ILAQVGFSVG LGNVWRFPYL CQKNGGGAYL bmy_07780T0/1-729 VEEGSEVEDE RPAWNSKLQY ILAQVGFSVG LGNVWRFPYL CQKNGGGAYL BACU001002/1-729 VEEGSEVEDE RPAWNSKLQY ILAQVGFSVG LGNVWRFPYL CQKNGGGAYL 101 150 ENSP00000266682/1-730 LPYLILLMVI GIPLFFLELS VGQRIRRGSI GVWNYISPKL GGIGFASCVV ENSTTRP00000006809/1-732 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXI GVWNYISPKL GGIGFASCVV ENSBTAP00000024524/1-729 LPYLILLLVI GIPLFFLELS VGQRIRRGSI GVWNYISPQL GGIGFASCVV bmy_07780T0/1-729 LPYLILLLVI GIPLFFLELS VGQRIRRGSI GVWNYISPKL GGIGFASCVV BACU001002/1-729 LPYLILLLVI GIPLFFLELS VGQRIRRGSI GVWNYISPKL GGIGFASCVV 151 200 ENSP00000266682/1-730 CYFVALYYNV IIGWSLFYFS QSFQQPLPWD QCPLVKNASH TFVEPECEQS ENSTTRP00000006809/1-732 CFFVALYYNV IIGWSLFYFS QSFQQPLPWD QCPLVKNASH TFVEPECEKS ENSBTAP00000024524/1-729 CFFVALYYNV IIGWSLFYFS QSFQQPLPWD QCPLVKNASH TFVEPECEKS bmy_07780T0/1-729 CFFVALYYNV IIGWSLFYFS QSFQQPLPWD QCPLVKNASH TFVEPECEKS BACU001002/1-729 CFFVALYYNV IIGWSLFYFS QSFQQPLPWD QCPLVKNASH TFVEPECEKS 201 250 ENSP00000266682/1-730 SATTYYWYRE ALNISSSISE SGGLNWKMTI CLLAAWVMVC LAMIKGIQSS ENSTTRP00000006809/1-732 SATTYYWYRE ALNISSSISE SGGLNWKMTV CLLAAWVVVC LAMIKGIQSS ENSBTAP00000024524/1-729 SATTYYWYRE ALNISTSISE SGGLNWKMTI CLLAAWVVVC LAMIKGIQSS bmy_07780T0/1-729 SATTYYWYRE ALNISSSISE SGGLNWKMTV CLLAAWVVVC LAMIKGIQSS BACU001002/1-729 SATTYYWYRE ALNISSSISE SGGLNWKMTV CLLAAWVVVC LAMIKGIQSS 251 300 ENSP00000266682/1-730 GKIIYFSSLF PYVVLICFLI RAFLLNGSID GIRHMFTPKL EIMLEPKVWR ENSTTRP00000006809/1-732 GKIMYFSSLF PYVVLICFLI RALLLNGSID GIRHMFTPEL EIMLEPKVWR ENSBTAP00000024524/1-729 GKIMYFSSLF PYVVLICFLI RALLLNGSVD GIRHMFTPEL EIMLEPKVWR bmy_07780T0/1-729 GKIMYFSSLF PYVVLICFLI RALLLNGSID GIRHMFTPEL EMMLEPKVWR BACU001002/1-729 GKIMYFSSLF PYVVLICFLI RALLLNGSID GIRHMFTPEL EMMLEPKVWR 301 350 ENSP00000266682/1-730 EAATQVFFAL GLGFGGVIAF SSYNKRDNNC HFDAVLVSFI NFFTSVLATL ENSTTRP00000006809/1-732 EAAAQVFFAL GLGFGGVIAF SSYNKRDNNC HFDAVLVSFI NFFTSILATL ENSBTAP00000024524/1-729 EAAAQVFFAL GLGFGGVIAF SSYNKRDNNC HFDAVLVSFI NFFTSILATL bmy_07780T0/1-729 EAAAQVFFAL GLGFGGVIAF SSYNKRDNNC HFDAVLVSFI NFFTSILATL BACU001002/1-729 EAAAQVFFAL GLGFGGVIAF SSYNKRDNNC HFDAVLVSFI NFFTSILATL 351 400 ENSP00000266682/1-730 VVFAVLGFKA NVINEKCITQ NSETIMKFLK MGNISQDIIP HHINLSTVTA ENSTTRP00000006809/1-732 VVFAVLGFKA NVINEKCIAE NLEMVIKLVK MGNISQDIIP HHINFSAVTA ENSBTAP00000024524/1-729 VVFAVLGFKA NVINEKCIAE NSEMIIKLVK MGNISQDIIP HHINFSAITA bmy_07780T0/1-729 VVFAVLGFKA NVINEKCIAE NLEMIIKLVK MGNISQDIIP HHINFSAVTA BACU001002/1-729 VVFAVLGFKA NVINEKCIAE NLEMIIKLVK MGNISQDIIP HHINFSAVTA 401 450 ENSP00000266682/1-730 EDYHLVYDII QKVKEEEFPA LHLNSCKIEE ELNKAVQGTG LAFIAFTEAM ENSTTRP00000006809/1-732 EDYHLVYDII QKVKEEEFPS LQLNSCQIED ELNKAVQGTG LAFIAFTEAM ENSBTAP00000024524/1-729 EDYDLIYDII QKVKEEEFPA LHLNACQIED ELNKAVQGTG LAFIAFTEAM bmy_07780T0/1-729 EDYHLVYDII QKVKEEEFPA LHLNSCQIED ELNKAVQGTG LAFIAFTEAM BACU001002/1-729 EDYHLVYDII QKVKEEEFPA LHLNSCQIED ELNKAVQGTG LAFIAFTEAM 451 500 ENSP00000266682/1-730 THFPASPFWS VMFFLMLVNL GLGSMFGTIE GIVTPIVDTF KVRKEILTVI ENSTTRP00000006809/1-732 THFPASPFWS VMFFLMLVNL GLGSMFGTIE GIITPIVDTF KVRKEILTVI ENSBTAP00000024524/1-729 THFPASPFWS VMFFLMLVNL GLGSMFGTIE GIITPVVDTF KVRKEILTVI bmy_07780T0/1-729 THFPASPFWS VMFFLMLVNL GLGSMFGTIE GIITPIVDTF KVRKEILTVI BACU001002/1-729 THFPASPFWS VMFFLMLVNL GLGSMFGTIE GIITPIVDTF KVRKEVLTVI 501 550 ENSP00000266682/1-730 CCLLAFCIGL IFVQRSGNYF VTMFDDYSAT LPLLIVVILE NIAVCFVYGI ENSTTRP00000006809/1-732 CCLLAFCIGL IFVQRSGNYF VTMFDDYSAT LPLLIVVILE NIAVSFVYGI ENSBTAP00000024524/1-729 CCLLAFCIGL IFVQRSGNYF VTMFDDYSAT LPLLIVVILE NIAVSFVYGI bmy_07780T0/1-729 CCLLAFCIGL MFVQRSGNYF VTMFDDYSAT LPLLIVVILE NIAVSFVYGI BACU001002/1-729 CCLLAFCIGL MFVQRSGNYF VTMFDDYSAT LPLLIVVILE NIAVSFVYGI 551 600 ENSP00000266682/1-730 DKFMEDLKDM LGFAPSRYYY YMWKYISPLM LLSLLIASVV NMGLSPPGYN ENSTTRP00000006809/1-732 DKFMEDLKDM LGFAPNRYYY YMWKYISPLM LLSLLIASIV NMGLSPPGYN ENSBTAP00000024524/1-729 DKFMEDLKDM LGFTPNRYYY YMWKYISPLM LLSLLIASIV NMGLSPPGYN bmy_07780T0/1-729 DKFMEDLKDM LGFAPNRYYY YMWKYISPLM LLSLLIASIV NMGLSPPGYN BACU001002/1-729 DKFMEDLKDM LGFAPNRYYY YMWKYISPLM LLSLLIASIV NMGLSPPGYN 601 650 ENSP00000266682/1-730 AWIEDKASEE FLSYPTWGLV VCVSLVVFAI LPVPVVFIVR RFNLIDDSSG ENSTTRP00000006809/1-732 AWIEEKASEE FLSYPTWGMV VCISLMVLAI LPVPIVFIIR RCNLIDDSSG ENSBTAP00000024524/1-729 AWMEDKASEK FLSYPTWGMV ICISLMVLAI LPIPVVFIIR RCNLIDDSSG bmy_07780T0/1-729 AWIEDKASEE FQSYPTWGMV VCISLMVLAI LPVPIVFIIR RCNLIDDSSG BACU001002/1-729 AWTEDKASEE FQSYPTWGMV VCISLMVLAI LPVPIVFIIR RCNLIDDSSG 651 700 ENSP00000266682/1-730 NLASVTYKRG RVLKEPVNLE GDDTSLIHGK IPSEMPSPNF GKNIYRKQSG ENSTTRP00000006809/1-732 NLASVTYKRG RVLKEPINLE GDDASLIHGK ISSEMSSPNF GKNIYRKQSG ENSBTAP00000024524/1-729 NLASVTYKRG RVLKEPVNLE GDDASLIHGK ISSEMSSPNF GKNIYRKQSG bmy_07780T0/1-729 NLASVTYKRG RVLKEPINLE GDDASLIHGK TSSEMSSPNF GKNIYRKQSG BACU001002/1-729 NLASVTYKRG RVLKEPLNLE GDDASLIHGK TSSQMSSPNF GKNIYRKQSG 701 750 ENSP00000266682/1-730 SPTLDTAPNG RYGIGYLMAD I--MPDMPES DL ENSTTRP00000006809/1-732 SPTLDTAPNG RYGIGYLMAD MPDMPDMPES DL ENSBTAP00000024524/1-729 SPTLDTAPNG RYGIGYLMAD ---MPDMPES DL bmy_07780T0/1-729 SPTLDTAPNG RYGIGYLMAD ---MPDMPES DL BACU001002/1-729 SPTLDTAPNG RYGIGYLMAD ---MPDMPES DL