KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:29 2014 Check: 00 .. Name: ENSP00000297767/1-235 Len: 235 Check: 1072 Weight: 1.00 Name: ENSBTAP00000024541/1-235 Len: 235 Check: 9047 Weight: 1.00 Name: ENSTTRP00000009489/1-235 Len: 235 Check: 2809 Weight: 1.00 Name: bmy_18822T0/1-172 Len: 235 Check: 1729 Weight: 1.00 Name: BACU006730/1-172 Len: 235 Check: 1396 Weight: 1.00 // 1 50 ENSP00000297767/1-235 MKYVFYLGVL AGTFFFADSS VQKEDPAPYL VYLKSHFNPC VGVLIKPSWV ENSBTAP00000024541/1-235 MKFTFCLTVL AGTFFSAHSS VQKDDPSPYL VYLKSHFNPC VGVLIKSNWV ENSTTRP00000009489/1-235 MKFIFCLSVL AGTIFPAQSS VQKEDHAPYL VYLXXXXXXC VGVLIKSSWV bmy_18822T0/1-172 ---------- ---------- ---------- ---------- ---------- BACU006730/1-172 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000297767/1-235 LAPAHCYLPN LKVMLGNFKS RVRDGTEQTI NPIQIVRYWN YSHSAPQDDL ENSBTAP00000024541/1-235 LAPAHCYLPN LKVMLGNLRI RIRDGTEQTI NPIQIIRYWN HSHTAPQDDL ENSTTRP00000009489/1-235 LAPAHCYLPN LKVMLGNLRI RIRDGTEQII DPIQIVRYWN YSHSSPQDDL bmy_18822T0/1-172 ---------- ---MLGNLRV RIRDGTEQII DPIQIVRYWN YSHSSPQDDL BACU006730/1-172 ---------- ---MLGNLRV RIRDGTEQII DPIQIVRYWN YSHSSPQDDL 101 150 ENSP00000297767/1-235 MLIKLAKPAM LNPKVQPLTL ATTNVRPGTV CLLSGLDWSQ ENSGRHPDLR ENSBTAP00000024541/1-235 MLIRLAKPAI LNEKVQPIAL ATSTVKPGTI CMLSGLDWSQ NNNGRHPDLR ENSTTRP00000009489/1-235 MLIRLAKPAI LNHKVQPIPL ATSTVKPGTI CMLSGLDWSQ DNSGRHPDLR bmy_18822T0/1-172 MLIRLAKPAN LNHKVQPIPL ATSTVKPGTV CMLSGLDWSQ DNSGRHPDLR BACU006730/1-172 MLIRLAKPAN LNHKVQPIPL ATSTVKPGTV CMLSGLDWSQ DNSGRHPDLR 151 200 ENSP00000297767/1-235 QNLEAPVMSD RECQKTEQGK SHRNSLCVKF VKVFSRIFGE VAVATVICKD ENSBTAP00000024541/1-235 QNLEAPVMSD TACQETEQGK SHRNSICVKF LKVFSRIFGE LAVATVICKN ENSTTRP00000009489/1-235 QNLEAPMMSD ADCQKTEQGK SHRNSICVKF VEVLSRIFGX XXXXXVICKG bmy_18822T0/1-172 QNLEAPMMSD ADCRKTKQGK SHRNSICVKF VKVFSRIFGE VAVATVICKG BACU006730/1-172 QNLEAPMMSD ADCQKTEQGK SHRNSICVKF VKVFSRIFGE VAVATVICKG 201 250 ENSP00000297767/1-235 KLQGIEVGHF MGGDVGIYTN VYKYVSWIEN TAKDK ENSBTAP00000024541/1-235 KLQGIEVGHF MGGDVGIYTN VQKYVSWIES TTKDK ENSTTRP00000009489/1-235 KLQGIEVGHF REGDVGIYTN VQKYITWIEN VTKDK bmy_18822T0/1-172 KLQGIEVGHF MGGDVGIYTN VQKYITWIEN VTKDK BACU006730/1-172 KLQGIEVGHF MGGDVGIYTN VQKYITWIEN VTKDK