KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:30 2014 Check: 00 .. Name: BACU001377/1-637 Len: 639 Check: 8268 Weight: 1.00 Name: ENSP00000317473/1-331 Len: 639 Check: 9424 Weight: 1.00 Name: ENSBTAP00000024551/1-331 Len: 639 Check: 238 Weight: 1.00 Name: ENSTTRP00000013395/1-330 Len: 639 Check: 6172 Weight: 1.00 Name: bmy_08473T0/1-295 Len: 639 Check: 8729 Weight: 1.00 // 1 50 BACU001377/1-637 MGTPQKDVII KSDAPDTLLV EKHADYIASY GSKKDDYEYC MSEYLRMSGI ENSP00000317473/1-331 MGTPQKDVII KSDAPDTLLL EKHADYIASY GSKKDDYEYC MSEYLRMSGI ENSBTAP00000024551/1-331 KGTPQKDVII KSDAPDTLLL EKHADYIASY GSKKDDYEYC MSEYLRMSGI ENSTTRP00000013395/1-330 MGTPQKDVII KSDAPDTLLV EKHADYIASY GSKKDDYEYC MSEYLRMSGI bmy_08473T0/1-295 ---------- ---------- ---------- ---------- MSEYLRMSGI 51 100 BACU001377/1-637 YWGLTVMDLM GQLHRMNREE ILTFIKSCQH ECGGISASIG HDPHLLYTLS ENSP00000317473/1-331 YWGLTVMDLM GQLHRMNREE ILAFIKSCQH ECGGISASIG HDPHLLYTLS ENSBTAP00000024551/1-331 YWGLTVMDLM GQLHRMNREE ILTFIKSCQH ECGGISASIG HDPHLLYTLS ENSTTRP00000013395/1-330 YWGLTVMDLM GQLHRMNREE ILTFIKSCQH ECGGISASIG HDPHLLYTLS bmy_08473T0/1-295 YWGLTVMDLM GQLHRMNREE ILTFIKSCQH ECGGISASIG HDPHLLYTLS 101 150 BACU001377/1-637 AVQILTLYDN INVIDVNKVV EYVQSLQKED GSFAGDIWGE IDTRFSFCAV ENSP00000317473/1-331 AVQILTLYDS INVIDVNKVV EYVKGLQKED GSFAGDIWGE IDTRFSFCAV ENSBTAP00000024551/1-331 AVQILTLYDS INVIDINKVV EYVQSLQKED GSFAGDIWGE IDTRFSFCAV ENSTTRP00000013395/1-330 AVQILTLYDS INVIDVNKVV EYVQSLQKED GSFAGDIWGE IDTRFSFCAV bmy_08473T0/1-295 AVQILTLYDS INVIDVNKVV EYVQSLQKED GSFAGDIWGE IDTRFSFCAV 151 200 BACU001377/1-637 ATLALLGKLD AINVEKAIEF VLSCMNFDGG FGCRPGFESH AGQIYCCTGF ENSP00000317473/1-331 ATLALLGKLD AINVEKAIEF VLSCMNFDGG FGCRPGSESH AGQIYCCTGF ENSBTAP00000024551/1-331 ATLALLGKLD AINVEKAIEF VLSCMNFDGG FGCRPGSESH AGQIYCCTGF ENSTTRP00000013395/1-330 ATLALLGKLD AINVEKAIEF VLSCMNFDGG FGCRPGSESH AGQIYCCTGF bmy_08473T0/1-295 ATLALLGKLD AINVEKAIEF VLSCMNFDGG FGCRPGSESH AGQIYCCTGF 201 250 BACU001377/1-637 LAITSQLHRV NSDLLGWWLC ERQLPSGGLN GRPEKLPDVC YSWWVLASLK ENSP00000317473/1-331 LAITSQLHQV NSDLLGWWLC ERQLPSGGLN GRPEKLPDVC YSWWVLASLK ENSBTAP00000024551/1-331 LAITSQLHQV NSDLLGWWLC ERQLPSGGLN GRPEKLPDVC YSWWVLASLK ENSTTRP00000013395/1-330 LAITSQLHRV NSDLLGWWLC ERQLPSGGLN GRPEKLPDVC YSWWVLASLK bmy_08473T0/1-295 LAITSQLHRV NSDLLGWWLC ERQLPSGGLN GRPEKLPDVC YSWWVLASLK 251 300 BACU001377/1-637 IIGRLHWIDR EKLRXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000317473/1-331 IIGRLHWIDR EKLRNFILA- ---------- ---------- ---------- ENSBTAP00000024551/1-331 IIGRLHWIDR EKLRSFILA- ---------- ---------- ---------- ENSTTRP00000013395/1-330 IIGRLHWIDR EKLRSFILA- ---------- ---------- ---------- bmy_08473T0/1-295 IIGRLHWIDR EKLRSFILA- ---------- ---------- ---------- 301 350 BACU001377/1-637 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000317473/1-331 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024551/1-331 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013395/1-330 ---------- ---------- ---------- ---------- ---------- bmy_08473T0/1-295 ---------- ---------- ---------- ---------- ---------- 351 400 BACU001377/1-637 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000317473/1-331 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024551/1-331 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013395/1-330 ---------- ---------- ---------- ---------- ---------- bmy_08473T0/1-295 ---------- ---------- ---------- ---------- ---------- 401 450 BACU001377/1-637 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000317473/1-331 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024551/1-331 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013395/1-330 ---------- ---------- ---------- ---------- ---------- bmy_08473T0/1-295 ---------- ---------- ---------- ---------- ---------- 451 500 BACU001377/1-637 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000317473/1-331 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024551/1-331 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013395/1-330 ---------- ---------- ---------- ---------- ---------- bmy_08473T0/1-295 ---------- ---------- ---------- ---------- ---------- 501 550 BACU001377/1-637 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000317473/1-331 ---------- ---------- ---------- ---------- ----CQDEET ENSBTAP00000024551/1-331 ---------- ---------- ---------- ---------- ----CQDEET ENSTTRP00000013395/1-330 ---------- ---------- ---------- ---------- ----CQDEET bmy_08473T0/1-295 ---------- ---------- ---------- ---------- ----CQDEET 551 600 BACU001377/1-637 XXXXXXXXXX XXXXXXXXXX XXXXXXXXFL GKKKNFKENL KKKKKKKKGQ ENSP00000317473/1-331 GGFADRPGDM ----VDPFHT LFGIAGLSLL GEE------- ---------Q ENSBTAP00000024551/1-331 GGFADRPGDM ----VDPFHT LFGIAGLSLL GEE------- ---------Q ENSTTRP00000013395/1-330 GGFADRPGDM ----VDPFHT LFGIAGLSLL GEE------- ---------H bmy_08473T0/1-295 GGFADRPGDM ASIFVDPFHT LFGIAGLSLL GEE------- ---------Q 601 650 BACU001377/1-637 LKPGLISRVL PPWQEISCFC LPIKKKKIRA TTIRQQK-- ENSP00000317473/1-331 IKP------V NP-----VFC MP--EEVLQR VNVQPELVS ENSBTAP00000024551/1-331 IKP------V SP-----VFC MP--EEVLRR VNVQPELVS ENSTTRP00000013395/1-330 IKP------V SP------FC MP--EEILRR VNVQRELVS bmy_08473T0/1-295 IKP------V SP-----VFC MP--EEILRR VNVQPELVS