KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:23:34 2014  Check: 00 ..

 Name: ENSP00000394331/1-224     Len:    224  Check:  8195  Weight:  1.00
 Name: ENSBTAP00000024561/1-224  Len:    224  Check:  4419  Weight:  1.00
 Name: bmy_07542T0/1-189         Len:    224  Check:  8675  Weight:  1.00
 Name: BACU011409/1-224          Len:    224  Check:  4949  Weight:  1.00

//


                          1                                                   50
ENSP00000394331/1-224     MSAVGAATPY LHHPGDSHSG RVSFLGAQLP PEVAAMARLL GDLDRSTFRK 
ENSBTAP00000024561/1-224  MSAVGPAAAH LHRPGDSHSD CVSFLGAQLP PEVAAMPQLL GDLDRATFRK 
bmy_07542T0/1-189         ---------- ---------- ---------- -----MPQLL RDLDRGTFRK 
BACU011409/1-224          MSAVGSAAPH LHRPGDSHSG CMSFLGAQLP PEVAAMPQLL RDLDRGTFRK 


                          51                                                 100
ENSP00000394331/1-224     LLKFVVSSLQ GEDCREAVQR LGVSANLPEE QLGALLAGMH TLLQQALRLP 
ENSBTAP00000024561/1-224  LLKLVVSSLQ GEDCREAVQH LRAGANLPEE QLGALIAGTH TLLQQALRLP 
bmy_07542T0/1-189         LLKLVVSSLQ GEDCREAVRR LGAGADLPEE QLGALIAGTH TLLQQALRLP 
BACU011409/1-224          LLKLVVSSLQ GEDCREAVRR LGAGADLPEE RLGALIAGTY TLLQQALRLP 


                          101                                                150
ENSP00000394331/1-224     PTSLKPDTFR DQLQELCIPQ DLVGDLASVV FGSQRPLLDS VAQQQGAWLP 
ENSBTAP00000024561/1-224  PASLKPDTFK NQLQELCIPQ DLVVDLASVV FGSQRPLLDS VARQQGAWLP 
bmy_07542T0/1-189         PASLKPDAFK NQLQELCIPQ DLVVDLASVV FGSQRPLLDS AARQQGAWLP 
BACU011409/1-224          PASLKPDAFK NQLQELCIPQ DLVVDLASVV FGSQRPLLDS AARQQGAWLP 


                          151                                                200
ENSP00000394331/1-224     HVADFRWRVD VAISTSALAR SLQPSVLMQL KLSDGSAYRF EVPTAKFQEL 
ENSBTAP00000024561/1-224  HIADFRWRVD VAISTSALAR SLQPSVLMHL KLSDGSALRF EVPTAKFQEL 
bmy_07542T0/1-189         HVADFRWRVD VAISTSALAR SLQPSVLMQL KLSDGSAFRF EVPTAKFQEL 
BACU011409/1-224          HVADFRWRVD VAISTSALAR SLQPSVLMQL KLSDGSALRF EVPTAKFQEL 


                          201                                                250
ENSP00000394331/1-224     RYSVALVLKE MADLEKRCER RLQD 
ENSBTAP00000024561/1-224  RFAVALVLKE MADLEKRCER KLQD 
bmy_07542T0/1-189         RFGVAMVLKE MADLEKRCER KLQG 
BACU011409/1-224          RFGVAMVLKE MADLEKRCER KLQG