KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:34 2014 Check: 00 .. Name: ENSTTRP00000004441/1-441 Len: 562 Check: 3447 Weight: 1.00 Name: ENSP00000264689/1-469 Len: 562 Check: 8614 Weight: 1.00 Name: ENSBTAP00000024562/1-469 Len: 562 Check: 410 Weight: 1.00 Name: bmy_00305T0/1-550 Len: 562 Check: 924 Weight: 1.00 Name: BACU018936/1-444 Len: 562 Check: 1082 Weight: 1.00 // 1 50 ENSTTRP00000004441/1-441 ---------- ---------- ---------- ---------- ---------- ENSP00000264689/1-469 ---------- -----MVISE SMDILFRIRG GLDLAFQLAT P-------NE ENSBTAP00000024562/1-469 ---------- -----MVISE AMDILFRIRG GLDLAFQLAT P-------NE bmy_00305T0/1-550 MVRPVTYVAG HVGNCSRPSQ APPPMTPVPG QRPVPGRPSA PLSAPRTRYE BACU018936/1-444 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000004441/1-441 IFVKKALKHM LSDLSTKLSS NALVFRICHS SVYIWPNSDM NTIPGELTDS ENSP00000264689/1-469 IFLKKALKHV LSDLSTKLSS NALVFRICHS SVYIWPSSDI NTIPGELTDA ENSBTAP00000024562/1-469 IFIKNALKHV LSDLSTKLSS NALVFRICHS SVYVWPNSDM NTIPGELTDS bmy_00305T0/1-550 IFIKKALKHM LSDLSTKLSS NALVFRICHS SVYIWPNSDM NTIPGELTDS BACU018936/1-444 IFIKKALKHM LSDLSTKLSS NALVFRICHS SVYIWPNSDM NTIPGELTDS 101 150 ENSTTRP00000004441/1-441 STCKNIMRFI QFGQEEDTKR KFMRKKDKKL SDMXXXXXXX XXXXXXXXXX ENSP00000264689/1-469 SACKNILRFI QFEPEEDIKR KFMRKKDKKL SDMHQIVNID LMLEMSTSLA ENSBTAP00000024562/1-469 SACKDIMRFI QFEQEEDTKR KFTKKKDKKL SDMHQIVNID LMLEVSTPLA bmy_00305T0/1-550 STCKNIMRFI Q--------R YKTKIHEEER QKVHQIVNID LMLEMSTPLA BACU018936/1-444 STCKNIMRFI QFEQEEDTKR KFMRKKDKKL SDLGPLRR-G QTKTVATVIK 151 200 ENSTTRP00000004441/1-441 XXXXXXXXXX XXXX-XXXXX XXXXXXXXXX XXXXXX---X XXXXXXXXXX ENSP00000264689/1-469 AVTPIIERES GGHH-YVNMT LPVDAVISVA PEETWG---K VRKLLVDAIH ENSBTAP00000024562/1-469 AVTPIIERES GGHH-YVSMT LPVDAVLSVA PEETWG---K VRKLLVDAIH bmy_00305T0/1-550 PVTPIIERES GGHH-YVNMT LPVDAVVSVA PEETWG---K VRKRLVDAIH BACU018936/1-444 RREWIQELFR GSNRLYLETN WMWDDQLLAW VKMEDGEDMR VRKHLVDAIH 201 250 ENSTTRP00000004441/1-441 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXSY PSGIPDDQLQ ENSP00000264689/1-469 NQLTDMEKCI LKYMKGTSIV VPEPLHFLLP GKKNLVTISY PSGIPDGQLQ ENSBTAP00000024562/1-469 NQLTDMEKCI LKYMKGTSIV VPEPLHFSLP GEKNLVTISY PSGIPDGQLQ bmy_00305T0/1-550 NQLTDMEQCI LKYMKGTSIV VPEPLHFLLP GEKNLVTVSY PSGIPDDQLQ BACU018936/1-444 NQLTDMEQCI LKYMKGTSIM VPEPLHFLLP GEKNLVTVSY PSGIPDDQLQ 251 300 ENSTTRP00000004441/1-441 AYRKELHNLF NLPHDRPYFK RSNAYHFPDE PYKDGYIRNP HTYLNPPNIE ENSP00000264689/1-469 AYRKELHDLF NLPHDRPYFK RSNAYHFPDE PYKDGYIRNP HTYLNPPNME ENSBTAP00000024562/1-469 AYRKELHDVF NLPHDRPYFK RSNAYHFPDE PYKDGYIRNP HTYLNPPNIE bmy_00305T0/1-550 AYRKELHDLF NLPHDRPYFR RSNAYHFPDE PYKDGYVRNP HTYLNSPNIE BACU018936/1-444 AYRKELHDLF NLPHDRPYFR RSNAYHFPDE PYKDGYVRNP HTYLNSPNIE 301 350 ENSTTRP00000004441/1-441 TGMISVVQGI YGYHHYMQDR IDDNGWGCAY RSLQTICSWF KHQGYTERSI ENSP00000264689/1-469 TGMIYVVQGI YGYHHYMQDR IDDNGWGCAY RSLQTICSWF KHQGYTERSI ENSBTAP00000024562/1-469 TGMVYVVQGT YGYHHYMQDR IDDNGWGCAY RSLQTICSWF KHQGYTERSI bmy_00305T0/1-550 TVVISVVQGI YGYHHYMQDR IDDNGWGCAY RSLQTICSWF KHQGYTERSI BACU018936/1-444 TGVISVVQGI YGYHHYMQDR IDDNGWGCAY RSLQTICSWF KHQGYTERSI 351 400 ENSTTRP00000004441/1-441 PTHREIQQAL VDAGDKPATF VGSRQWIGSI EVQLVLNHLI GITSKILFVS ENSP00000264689/1-469 PTHREIQQAL VDAGDKPATF VGSRQWIGSI EVQLVLNQLI GITSKILFVS ENSBTAP00000024562/1-469 PTHREIQQAL VDAGDKPATF VGSRQWIGSI EVQLVLNHLI GVTSKILFVS bmy_00305T0/1-550 PTHREIQQAL VDAGDKPATF VGSRQWIGSI EVQLVLNHLI GITSKILFVS BACU018936/1-444 PTHREIQQAL VDAGDKPATF VGSQQWIGSI EVQLALNHLI GITSKILFVS 401 450 ENSTTRP00000004441/1-441 QGSEMASQGR ELVNHFQSEG TPVMIGGGVL AHTILGVAWN EITGQIKFLI ENSP00000264689/1-469 QGSEIASQGR ELANHFQSEG TPVMIGGGVL AHTILGVAWN EITGQIKFLI ENSBTAP00000024562/1-469 QGSEMASQGR ELANHFQSEG TPIMIGGGVL AHTILGVAWN EITGQIKFLI bmy_00305T0/1-550 QGSEMASQGR ELVNHFQSEG TPVMIGGGVL AHTILGVAWN EITGQIKFLI BACU018936/1-444 QGSEMASQGR ELVNHFQSEG TPVMIGGGVL AHTILGVAWN EITGQIKFLI 451 500 ENSTTRP00000004441/1-441 LDPHYTGAED LQVILEK--- ---------- ---------- ---------- ENSP00000264689/1-469 LDPHYTGAED LQVILEK--- ---------- ---------- ---------- ENSBTAP00000024562/1-469 LDPHYTGAED LQVILEK--- ---------- ---------- ---------- bmy_00305T0/1-550 LDPHYTGAED LQVIIEKAKN PEPKDRKLAA NRKMDYELRA GSSLINQKLA BACU018936/1-444 LDPHYTGAED LQVIIEK--- ---------- ---------- ---------- 501 550 ENSTTRP00000004441/1-441 ---------- ---------- ---------- ----GWCGWK GPDFWNSDAY ENSP00000264689/1-469 ---------- ---------- ---------- ----GWCGWK GPDFWNKDAY ENSBTAP00000024562/1-469 ---------- ---------- ---------- ----GWCGWK GPEFWNKDAY bmy_00305T0/1-550 KQYAGHYGGL TAFNLFTYNF ISFYEGVIFE TDLRGWCGWK GPDFWNNDAY BACU018936/1-444 ---------- ---------- ---------- ----GWCGWK GPDFWNNDAY 551 600 ENSTTRP00000004441/1-441 YNLCLPQRPN TI ENSP00000264689/1-469 YNLCLPQRPN MI ENSBTAP00000024562/1-469 YNLCLPQRPN TI bmy_00305T0/1-550 YNLCLPQRPN TI BACU018936/1-444 YNLCLPQRPN TI