KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:37 2014 Check: 00 .. Name: ENSTTRP00000006098/1-537 Len: 555 Check: 6392 Weight: 1.00 Name: ENSP00000450436/1-535 Len: 555 Check: 5794 Weight: 1.00 Name: ENSBTAP00000024584/1-537 Len: 555 Check: 6853 Weight: 1.00 Name: bmy_03556T0/1-553 Len: 555 Check: 2464 Weight: 1.00 Name: BACU010804/1-480 Len: 555 Check: 9646 Weight: 1.00 // 1 50 ENSTTRP00000006098/1-537 MAAVAAVAAA AAMRARILQV SSKVNSS--W HPASSFSSSS VPSVKLFIDG ENSP00000450436/1-535 ---MAALLAA AAVRARILQV SSKVKSSPTW YSASSF-SSS VPTVKLFIGG ENSBTAP00000024584/1-537 MAAVAVAAAA AALRARILQV SSKVNSS--W QPASSFSSSS VPTVKLFIDG bmy_03556T0/1-553 MAAVAAVAAA AAVRARILQV SSKVNSS--W HPASSFSSSS VPTVKLFIDG BACU010804/1-480 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006098/1-537 KFIESKSDKW MDIHNPATNE VIGRVPQATK AEMDAAVSSC KRAFPAWADT ENSP00000450436/1-535 KFVESKSDKW IDIHNPATNE VIGRVPQATK AEMDAAIASC KRAFPAWADT ENSBTAP00000024584/1-537 KFIESKSDKW IDIHNPATNE VIGRVPESTK AEMDAAVSSC KRTFPAWADT bmy_03556T0/1-553 KFIESKSDKW MDIHNPATNE VIGRVPQATK AEMDAAVSSC KRAFPAWADT BACU010804/1-480 ---------M CCFLHQATNE VIGRVPQATK AEMDAAVSSC KRAFPAWADT 101 150 ENSTTRP00000006098/1-537 SILSRQQVLL RYQQLIKENL XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000450436/1-535 SVLSRQQVLL RYQQLIKENL KEIAKLITLE QGKTLADAEG DVFRGLQVVE ENSBTAP00000024584/1-537 SILSRQQVLL RYQQLIKENL KEIARLITLE QGKTLADAEG DVFRGLQVVE bmy_03556T0/1-553 SILSRQQVLL RYQQLIKENL KEIARLITLE QGKTLADAEG DVFRGLQVVE BACU010804/1-480 SILSRQQVLL RYQQLIKENL KEIARLITLE QGKTLADAEG DVFRGLQVVE 151 200 ENSTTRP00000006098/1-537 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000450436/1-535 HACSVTSLMM GETMPSITKD MDLYSYRLPL GVCAGIAPFN FPAMIPLWMF ENSBTAP00000024584/1-537 HACSVTSLML GETMPSITKD MDLYSYRLPL GVCAGIAPFN FPAMIPLWMF bmy_03556T0/1-553 HACSVTSLML GETMPSITKD MDLYSYRLPL GVCAGIAPFN FPAMIPLWMF BACU010804/1-480 HACSVTSLML GETMPSITKD MDLYSYRLPL GVCAGIAPFN FPAMIPLWMF 201 250 ENSTTRP00000006098/1-537 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXVN ENSP00000450436/1-535 PMAMVCGNTF LMKPSERVPG ATMLLAKLLQ DSGAPDGTLN IIHGQHEAVN ENSBTAP00000024584/1-537 PMAMVCGNTF LMKPSERVPG ATMLLAKLFQ DSGAPDGTLN IIHGQHEAVN bmy_03556T0/1-553 PMAMVCGNTF LMKPSERVPG ATILLAKLLQ DSGAPDGTLN VIHGQHEAVN BACU010804/1-480 PMAMVCGNTF LMKPSERVPG ATILLAKLLQ DSGAPDGTLN VIHGQHEAVN 251 300 ENSTTRP00000006098/1-537 FICDHPDIKA ISFVGSNRAG EYIFERGSRH GKRVQANMGA KNHGVVMPDA ENSP00000450436/1-535 FICDHPDIKA ISFVGSNKAG EYIFERGSRH GKRVQANMGA KNHGVVMPDA ENSBTAP00000024584/1-537 FICDHPDIKA ISFVGSNQAG EYIFERGSRH GKRVQANMGA KNHGVVMPDA bmy_03556T0/1-553 FICDHLDIKA ISFVGSNQAG EYIFERGSRH GKRVQANMGA KNHGVVMPDA BACU010804/1-480 FICDHLDIKA ISFVGSNQAG EYIFERGSRH GKRVQANMGA KNHGVVMPDA 301 350 ENSTTRP00000006098/1-537 NKENTLNQLV GAAFGAAGQR CMALSTAILV GEAKKWLPEL VERAKKLRVN ENSP00000450436/1-535 NKENTLNQLV GAAFGAAGQR CMALSTAVLV GEAKKWLPEL VEHAKNLRVN ENSBTAP00000024584/1-537 NKENTLNQLV GAAFGAAGQR CMALSTAILV GEAKKWLPEL VERAKKLRVN bmy_03556T0/1-553 NKENTLNQLV GAAFGAAGQR CMALSTAILV GEAKKWLPEL VERAKKLRVN BACU010804/1-480 NKENTLNQLV GAAFGAAGQR CMALSTAILV GEAKKWLPEL VERAKKLRVN 351 400 ENSTTRP00000006098/1-537 AGDQPGADLG PLITPQAKER VCNLIDSGTK EGASILLDGR DIKVKGYENG ENSP00000450436/1-535 AGDQPGADLG PLITPQAKER VCNLIDSGTK EGASILLDGR KIKVKGYENG ENSBTAP00000024584/1-537 AGDQPGADLG PLITPQAKER VCNLIDSGTK EGASILLDGR SIKVKGYENG bmy_03556T0/1-553 AGDQPGADLG PLITPHAKER VCNLIDSGTK EGASILLDGR DIKVKGYENG BACU010804/1-480 SGDQPGADLG PLITPHAKER VCNLIDSGTK EGASILLDGR DIKVKGYENG 401 450 ENSTTRP00000006098/1-537 NFVGPTIISN AKPNMTCYKE XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000450436/1-535 NFVGPTIISN VKPNMTCYKE EIFGPVLVVL ETETLDEAIQ IVNNNPYGNG ENSBTAP00000024584/1-537 NFVGPTIISN VKPNMTCYKE EIFGPVLVVL ETDTLDEAIK IVNDNPYGNG bmy_03556T0/1-553 NFVGPTIISN VKPNMTCYKE EIFGPVLVVL ETDTLDEAIK IVNDNPYGNG BACU010804/1-480 NFVGPTIISN VKPNMICYKE EIFGPVLLVL ETDTLDEAIK IVNDNPYGNG 451 500 ENSTTRP00000006098/1-537 XXXXXXXXXX XXXXXXXXXX XXVGVNVPIP VPLPMFSFTG SRASFRGDTN ENSP00000450436/1-535 TAIFTTNGAT ARKYAHLVDV GQVGVNVPIP VPLPMFSFTG SRSSFRGDTN ENSBTAP00000024584/1-537 TAIFTTNGAT ARKYSHLVDV GQVGVNVPIP VPLPMFSFTG SRASFRGDTN bmy_03556T0/1-553 TAIFTTNGAT ARKYSHLVDV GQVGVNVPIP VPLPMFSFTG SRASFRGDTN BACU010804/1-480 TAIFTTNGAT ARKYSHLVDV GQVGVNVPIP VPLPMFSFTG SRASFRGDTN 501 550 ENSTTRP00000006098/1-537 FYGKQ----- ---------- -GIQFYTQLK TVTSQWKEED ASLSSPAVVM ENSP00000450436/1-535 FYGKQ----- ---------- -GIQFYTQLK TITSQWKEED ATLSSPAVVM ENSBTAP00000024584/1-537 FYGKQ----- ---------- -GIQFYTQLK TITSQWKEED ASLSSPAVVM bmy_03556T0/1-553 FYGKQEQGFC KEGPASSFCE VGIQFYTQLK TVTSQWKEED ASLSSPAVVM BACU010804/1-480 FYGKQ----- ---------- -GIQFYTQLK TVTSQWKEED ASLSSPAVVM 551 600 ENSTTRP00000006098/1-537 PTMGR ENSP00000450436/1-535 PTMGR ENSBTAP00000024584/1-537 PTMGR bmy_03556T0/1-553 PTMGR BACU010804/1-480 PTMGR