KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:38 2014 Check: 00 .. Name: ENSTTRP00000013428/1-516 Len: 538 Check: 521 Weight: 1.00 Name: BACU008964/1-265 Len: 538 Check: 6278 Weight: 1.00 Name: ENSP00000415106/1-534 Len: 538 Check: 2772 Weight: 1.00 Name: ENSBTAP00000024595/1-530 Len: 538 Check: 7181 Weight: 1.00 Name: bmy_04135T0/1-518 Len: 538 Check: 2005 Weight: 1.00 // 1 50 ENSTTRP00000013428/1-516 ---------- -------MES PEEPGAAMDE NYFVNYTFKD RSHSGRVAQG BACU008964/1-265 ---------- -------MES PEEPGASMDE NYFVNYTFKD RSHSGRVAQG ENSP00000415106/1-534 MKGGNADSWQ REKLAS-MES PEEPGASMDE NYFVNYTFKD RSHSGRVAQG ENSBTAP00000024595/1-530 -----TDSWQ REKLATTMES PEEPGASMDE NYFVNYTFKD RSHSGRVAQG bmy_04135T0/1-518 ---------- -------MES PEEPGASMDE NYFVNYTFKD RSHSGRVAQG 51 100 ENSTTRP00000013428/1-516 IMKLCLEEEL FADVTISVEG REFQLHRLVL SAQSCFFRSM FTSNLKEAHN BACU008964/1-265 IMKLCLEEEL FADVTISVEG REFQLHRLVL SAQSCFFRSM FTSNLKEAHN ENSP00000415106/1-534 IMKLCLEEEL FADVTISVEG REFQLHRLVL SAQSCFFRSM FTSNLKEAHN ENSBTAP00000024595/1-530 IMKLCLEEEL FADVTISVEG REFQLHRLVL SAQSCFFRSM FTSNLKEAHN bmy_04135T0/1-518 IMKLCLEEEL FADVTISVEG REFQLHRLVL SAQSCFFRSM FTSNLKEAHN 101 150 ENSTTRP00000013428/1-516 RVIVLQDVSE SVFQLLVDYI YHGTVKLRAE ELQEIYEVSD MYQLTSLFEE BACU008964/1-265 RVIVLQDVSE SVFQLLVDYI YHGTVKLRAE ELQEIYEVSD MYQLTSLFEE ENSP00000415106/1-534 RVIVLQDVSE SVFQLLVDYI YHGTVKLRAE ELQEIYEVSD MYQLTSLFEE ENSBTAP00000024595/1-530 RVIVLQDVSE SVFQLLVDYI YHGTVKLRAE ELQEIYEVSD MYQLTSLFEE bmy_04135T0/1-518 RVIVLQDVSE SVFQLLVDYI YHGTVKLRAE ELQEIYEVSD MYQLTSLFEE 151 200 ENSTTRP00000013428/1-516 CSRFLARTVQ VGNCLQVMWL ADRHSDPELY TAAKHCAKAH LAQLQSTEEF BACU008964/1-265 CSRFLARTVQ VGNCLQVMWL ADRHSDPELY TAAKHCAKAH LAQLQSTEEF ENSP00000415106/1-534 CSRFLARTVQ VGNCLQVMWL ADRHSDPELY TAAKHCAKTH LAQLQNTEEF ENSBTAP00000024595/1-530 CSRFLARTVQ VGNCLQVMWL ADRHSDPELY TAAKHCAKAH LAQLQSTEEF bmy_04135T0/1-518 CSRFLARTVQ VGNCLQVMWL ADRHSDPELY TAAKHCAKAH LAQLQSTEEF 201 250 ENSTTRP00000013428/1-516 LHLPHRLLTD IISDGVPCSQ NPTEAIEAWI NFNKEEREAF SESLRTSLKE BACU008964/1-265 LHLPHHLLTD IISDGVPCSQ NPTEAIEAWI NFNKEEREAF SESLRTSLK- ENSP00000415106/1-534 LHLPHRLLTD IISDGVPCSQ NPTEAIEAWI NFNKEEREAF AESLRTSLKE ENSBTAP00000024595/1-530 LHLPHHLLTD IISDGVPCSQ NPTEAIEAWI NFNKEEREAF SESLRTSLKE bmy_04135T0/1-518 LHLPHHLLTD IISDGVPCSQ NPTEAIEAWI NFNKEEREAF SESLRTSLKE 251 300 ENSTTRP00000013428/1-516 --GDVHIYLI XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008964/1-265 ---------- ---------- ---------- ---------- VRQISL---- ENSP00000415106/1-534 IGENVHIYLI GKESSRTHSL AVSLHCAEDD SISVSGQNSL CHQITAACKH ENSBTAP00000024595/1-530 IGENVHIYLI GKESSRTHSL AVSLHCAEDD SISVSGQNSL CHQITAACKH bmy_04135T0/1-518 IGENVHIYLI GKESSRTHSL AVSLHCAEDD SISVSGQNSL CHQITAACKH 301 350 ENSTTRP00000013428/1-516 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008964/1-265 ---------- ---------- ---------- ---------- --VLGHHDIH ENSP00000415106/1-534 GGDLYVVGGS IPRRMWKCNN ATVDWEWCAP LPRDRLQHTL VSVPGKDAIY ENSBTAP00000024595/1-530 GGDLYVVGGS IPRRMWKCNN ATVDWEWCAP LPRDRLQHTL VSVPGKDAIY bmy_04135T0/1-518 GGDLYVVGGS IPRRMWKCNN ATVDWEWCAP LPRDRLQHTL VSVPGKDAIY 351 400 ENSTTRP00000013428/1-516 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008964/1-265 ALQ------- ---------- ---------- ---------- ---------- ENSP00000415106/1-534 SLGGKTLQDT LSNAVIYYRV GDNVWTETTQ LEVAVSGAAG ANLNGIIYLL ENSBTAP00000024595/1-530 SLGGKTLQDT LSNAVIYYRV GDNVWTETTQ LEVAVSGAAG ANLNGIIYLL bmy_04135T0/1-518 SLGGKTLQDT LSNAVIYYRV GDNVWTETTQ LEVAVSGAAG ANLNGIIYLL 401 450 ENSTTRP00000013428/1-516 XXXXXXXXXX XXXXXXXXXX XTETDKCHVK PYVLPFAGRM HAAVHKDLVF BACU008964/1-265 ---------- ---------- ---------- ----PFIG-- ---------- ENSP00000415106/1-534 GGEENDLDFF TKPSRLIQCF DTETDKCHVK PYVLPFAGRM HAAVHKDLVF ENSBTAP00000024595/1-530 GGEENDLDFF TKPSRLIQCF DTETDKCHVK PYVLPFAGRM HAAVHKDLVF bmy_04135T0/1-518 GGEENDLDFF TKPSRLIQCF DTETDKCHVK PYVLPFAGRM HAAVHKDLVF 451 500 ENSTTRP00000013428/1-516 IVAEGDSLVC YNPLLDSFTR LCLPEAWSSA PSLWKIASCN GSIYVFRDRY BACU008964/1-265 ---------- ---------- ---------- ---------- ---------- ENSP00000415106/1-534 IVAEGDSLVC YNPLLDSFTR LCLPEAWSSA PSLWKIASCN GSIYVFRDRY ENSBTAP00000024595/1-530 IVAEGDSLVC YNPLLDSFTR LCLPEAWSSA PSLWKIASCN GSIYVFRDPY bmy_04135T0/1-518 IVAEGDSLVC YNPLLDSFTR LCLPEAWSSA PSLWKIASCN GSIYVFRDRY 501 550 ENSTTRP00000013428/1-516 KKGDANTYKL DPATSAVTVT RGIKVLLTNL QFV---LA BACU008964/1-265 ---------- ---------- ------LASL MLVNKSLA ENSP00000415106/1-534 KKGDANTYKL DPATSAVTVT RGIKVLLTNL QFV---LA ENSBTAP00000024595/1-530 KKGDANTYKL DPATSAVTVT RGIKVLLTNL QFV---LA bmy_04135T0/1-518 KKGDANTYKL DPATSAVTVT RGIKVLLTNL QFV---LA