KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:38 2014 Check: 00 .. Name: ENSTTRP00000001706/1-550 Len: 564 Check: 6148 Weight: 1.00 Name: ENSP00000357079/1-551 Len: 564 Check: 7625 Weight: 1.00 Name: ENSBTAP00000024603/1-549 Len: 564 Check: 3013 Weight: 1.00 Name: bmy_06301T0/1-519 Len: 564 Check: 7294 Weight: 1.00 Name: BACU003887/1-562 Len: 564 Check: 4933 Weight: 1.00 // 1 50 ENSTTRP00000001706/1-550 VPLSTAGILS SSSTTSNRLR NRPCYRTKAL NSEVDESLFG AIKXXXXXXX ENSP00000357079/1-551 MPLSTAGILS SSSAASNRSR NKARYRTKAV SSEVDESLFG DIKSPAQGQS ENSBTAP00000024603/1-549 MPLSTAGVLS SASTASNRSR NRPRYRTKAL SSEVDESLFG AIKPLT--RS bmy_06301T0/1-519 -PLSTAGVLS SSSTTSNRSR NRPCYRTKAL NSEVDESLFG AIKPLT--QS BACU003887/1-562 MPLSTAGVLS SSSTTSNRSR NRPCYRTKAL NSEVDESLFG AIKPLT--QS 51 100 ENSTTRP00000001706/1-550 XXXXXXXXXX XXXXXXXXXX XXXXKPETVQ LITRDMVREL IIPTKDPSGE ENSP00000357079/1-551 DSPIVLLRDK HTLQKTLTAL GLDRKPETIQ LITRDMVREL IVPTEDPSGE ENSBTAP00000024603/1-549 DSPIVLLRDK HAIRKTLTAL GLDHKPETIQ LITRDMVREL IIPTKDPSGQ bmy_06301T0/1-519 DSPLVLLRDK HAIRKTLTAL GLDHKPETVQ LITRDMVREL IIPTKDPSGE BACU003887/1-562 DSPLVLLRDK HATRKTLTAL GLDHKPETVQ LITRDMVREL IIPTKDPSGE 101 150 ENSTTRP00000001706/1-550 SLIMSPEEFE RIKWASHVLT REELKAREQA FKEEKEAIVD AVTTRKKIMK ENSP00000357079/1-551 SLIISPEEFE RIKWASHVLT REELEARDQA FKKEKEATMD AVMTRKKIMK ENSBTAP00000024603/1-549 SLIMSPEEFE RIKWASHVLT KEELEAREQA FKKEKEAIVD TVTTRKKIMK bmy_06301T0/1-519 SLIMSPEEFE RIKWASHVLT REELKAREQA FKKEKEAIVD AVTTRKKIMK BACU003887/1-562 SLIMSPEEFE RIKWASHVLT REELKAREQA FKKEKEAIVD AVTTRKKIMK 151 200 ENSTTRP00000001706/1-550 QKEMVWRTSK KLNNLEEVAK GRAQNLLQRA RQLRMEHEEE LTDVSKIILN ENSP00000357079/1-551 QKEMVWNNNK KLSDLEEVAK ERAQNLLQRA NKLRMEQEEE LKDMSKIILN ENSBTAP00000024603/1-549 QKEMVWRNNR KLSDLEEVAK ERAQNLLQRA NQLRMEQEEE LKDMKKIILN bmy_06301T0/1-519 QKEMVWRNSK KLNDLEE--- ---------- ---------- ------IILN BACU003887/1-562 QKEMVWRNSK KLNDLEEVAK ERAQDLLQRA SQLRMEQEEE LKDMRKIILN 201 250 ENSTTRP00000001706/1-550 AKCHAIRDAQ ILEKQLIQKE LDAEEKRLDQ MMEVERQKSV QRQEELHRKR ENSP00000357079/1-551 AKCHAIRDAQ ILEKQQIQKE LDTEEKRLDQ MMEVERQKSI QRQEELERKR ENSBTAP00000024603/1-549 AKCHAIRDAQ ILEKQLIQKE LDAEEKRLDQ MMEVERQKSV QRQEELDRKR bmy_06301T0/1-519 AKCHAIRDAQ ILEKQLIQKE LDAEEKRLDQ MMEVERQKSV QRQEELHRKR BACU003887/1-562 AKCHAIRDAQ ILEKQLIQKE LDAEEKRLDQ MMEVERLKSV QRQEELHRKR 251 300 ENSTTRP00000001706/1-550 REESIRGRRH IVEQMEKKQE ERSLLAEQQQ QDKEQIRAYM EQLQEEDLRD ENSP00000357079/1-551 REERIRGRRQ IVEQMEKNQE ERSLLAEQRE QEKEQMLEYM EQLQEEDLKD ENSBTAP00000024603/1-549 REERIRGRRH IVEQMEKNQE ERSLLAEQRE QEKEQMLEYM EKLQEEDLRD bmy_06301T0/1-519 REERIRGRRH IVEQMEKNQE ERSLLAKQQE QEKEQMLAYR EQLQEEDLRD BACU003887/1-562 REERIRGRQH IVEQMEKNQE ERSLLAEQRE QEKEQMLAYR EQLQEEDLRD 301 350 ENSTTRP00000001706/1-550 LERRHQQKLQ MQAEIKRIND ENQRQKAELL AQEKLADQMV MEFTKKKM-- ENSP00000357079/1-551 MERRQQQKLK MQAEIKRIND ENQKQKAELL AQEKLADQMV MEFTKKKM-- ENSBTAP00000024603/1-549 LEQRHQQKLK MQAEIKRIND ENQRQKAELL AQEKLADQMV MEFTKKKM-- bmy_06301T0/1-519 LERRHQQKLK MQAEIKRIND ENQRQKAELL AQEKLADQMV MEFTKKKM-- BACU003887/1-562 LERRHQQKLK MQAEIKRIND ENQRQKAELL AQEKLADQMV MEFTKKKMVG 351 400 ENSTTRP00000001706/1-550 ---------- --REAEFEAE QERIRREKEK EIARLRAMQE KAQDYQAEQD ENSP00000357079/1-551 ---------- -AREAEFEAE QERIRREKEK EIARLRAMQE KAQDYQAEQD ENSBTAP00000024603/1-549 ---------- -AREAEFEAE QERIRREKEK EIARLRAMQE KAQDYQAEQD bmy_06301T0/1-519 ---------- -AREAEFEAE QERIXREKEK EIARLRAMQE KAQDYQAEQD BACU003887/1-562 TCLLMPGTSE QAREAEFEAE QERIRREKEK EIARLRAMQE KAQDYQAEQD 401 450 ENSTTRP00000001706/1-550 ALRAKRNQEV ADREWRRKEK ENAQKKMETE ARLRKSRQEQ VAFKEHALAV ENSP00000357079/1-551 ALRAKRNQEV ADREWRRKEK ENARKKMETE AELRKSRLEQ VAFKEHALAV ENSBTAP00000024603/1-549 ALRAKRNQEV ADREWRRKEK ENAQKKMETE AKLRKSRLEQ VAFKEHTLAV bmy_06301T0/1-519 ALRAKRNQEV ADREWRRKEK ENAQKKMETE AKLRKSRLEQ VAFKEHTLAI BACU003887/1-562 ALRAKRNQEV ADREWRRKEK EKAQKKMEAE AKLRKSRLEQ VAFKEHTLAV 451 500 ENSTTRP00000001706/1-550 QVQRDRDEFE RILRAQREQI EKQQLEEEKK ARGRLQYANE LQRQVRENQQ ENSP00000357079/1-551 QVQRDRDEFE RILRAQREQI EKERLEEEKK ATGRLQHANE LRRQVRENQQ ENSBTAP00000024603/1-549 QVQRDRDEFE RILRAQREQI EKERLEEEKK ATGRLQHANE LRRQVRENQQ bmy_06301T0/1-519 QVQRDRDEFE RILRAQREQI EKEQLEEEKK AMGRLQYANE LRRQVRESQQ BACU003887/1-562 QVQRDRDEFE RILRAQREQI EKEQLEEEKK AMGRLQYANE LRRQVRESQQ 501 550 ENSTTRP00000001706/1-550 KQLQDRIATF EEGRRLKEEA QKWRERIEGI KKKKIEELRA TGLPEKYCTE ENSP00000357079/1-551 KEVQNRIATF EEGRRLKEEA QKRRERIDEI KRKKLEELRA TGLPEKYCIE ENSBTAP00000024603/1-549 KQVQARIATF DEGRRLKEEA QKRRERIEDI KRKKLEELRA TGLPEKYCIE bmy_06301T0/1-519 QQVKDRIATF EEGRRLKEEA QKRRERIEDI KKKKIEELRA TGLPEKYCTE BACU003887/1-562 KHVQDRIATF EEGWRLKEEA RKRRERIEDI KKKKIEELRA TGLPEKYCTE 551 600 ENSTTRP00000001706/1-550 AERKANIQPD TSVD ENSP00000357079/1-551 AERKANILPA TSVN ENSBTAP00000024603/1-549 AERKANIPVN TSVN bmy_06301T0/1-519 AERKANIPPD TSVN BACU003887/1-562 AERKANIPSD TSVN