KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:39 2014 Check: 00 .. Name: ENSP00000330808/1-477 Len: 483 Check: 7115 Weight: 1.00 Name: ENSBTAP00000024606/1-473 Len: 483 Check: 458 Weight: 1.00 Name: ENSTTRP00000011345/1-474 Len: 483 Check: 218 Weight: 1.00 Name: bmy_18989T0/1-477 Len: 483 Check: 7366 Weight: 1.00 Name: BACU012277/1-438 Len: 483 Check: 9337 Weight: 1.00 // 1 50 ENSP00000330808/1-477 MWMFSWLCAI LIILAIAGMN TIAKTTPHTK FTKKSEEREM PKGLKPSSGP ENSBTAP00000024606/1-473 MWMFSWFCAI FIILVIASMD AVAKTTPYTK FTKKSEGKEM PKGPKPSSGL ENSTTRP00000011345/1-474 MWIFSWFCAI LIILAVAGVD TIVKTTPYTK FTKKSEGKEM PKGPKPSSGQ bmy_18989T0/1-477 MWIFSWFCAI LIILAIAGVD TIVKTTPYTK FTKKSEGKEM PKGPKLSSGQ BACU012277/1-438 ---------- ---------- ---------- ---------M PKGPKPSSGQ 51 100 ENSP00000330808/1-477 PPEEEETLFT EMAEMAEPIT KPSALDSVFG TATLSPFENF TLDPADFFLN ENSBTAP00000024606/1-473 PP-EEGAPFR DAAERAEPTP DPLVLDSAFD AATLFPSENL TLDTADFFLN ENSTTRP00000011345/1-474 PPEEEETPFT EAAEMAEPTP DPSAFNSVFG AATLFPSENL TLDTADFFLN bmy_18989T0/1-477 PPEEEETPFT EAAEMAEPTP DPSAFNSVFG AATLFPSENL TLDTADFFLN BACU012277/1-438 PPEEEETPFT EAAEMAEPTP DPSAFNSVFG AATLFPSENL TLDTADFFLN 101 150 ENSP00000330808/1-477 CCDCCSPVPG QKGEPGETGQ PGPKGEAGNL GIPGPPGVVG PQGPRGYKGE ENSBTAP00000024606/1-473 CCDCCSSGPG QKGEPGQTGK PGFKGEAGNI GIPGSPGIVG PQGPKGQKGE ENSTTRP00000011345/1-474 CCDCCSSGPG QKGEPGETGK PGFKGEAGGM GILGPPGVAG PQGPKGQKGE bmy_18989T0/1-477 CCDCCSSGPG QKGEPGETGK PGFKGEAGDM GILGPPGVTG PQGPKGQKGE BACU012277/1-438 CCDCCSSGPG QKGEPGETGK PGFKGEAGDM GILGPPGDTG PQGPKGQKGE 151 200 ENSP00000330808/1-477 KGLKGERGDQ ---GVPGYPG KPGAQGEPGP KGDKGNIGLG GVKGQKGSKG ENSBTAP00000024606/1-473 KGFKGERGDQ GASGVPGYPG KPGEPGGIGP KGDTGNIGPT GVKGQKGSKG ENSTTRP00000011345/1-474 KGLKGERGEQ GTNGVPGYPG KPGVPGGLGP KGDRGNIGLA GVKGQKGSKG bmy_18989T0/1-477 KGLKGERGEQ GTNGVPGYPG KPGEPGGLGP KGDRGNIGLA GVKGQKGSKG BACU012277/1-438 KGLKGERGEQ GTNGVPGYPG KPGEPGGLGP KGDRGNIGLA GVKGQKGSKG 201 250 ENSP00000330808/1-477 DTCGNCTKGE K---GDQGAM GSPGLHGGPG AKGEKGEMGE KGEMGDKGCC ENSBTAP00000024606/1-473 DTCANGIKGD K---GDRGPV GAPGLNGEPG AK------GE KGEVGDKGYS ENSTTRP00000011345/1-474 DTCANGTKGD K---GDRGAV GAPGLNGEPG AK------GD KGEMGDKGYC bmy_18989T0/1-477 DTCANGTKGE KGXKGDQGAV GAPGLNGEPG AK------GD KGEMGVKGYC BACU012277/1-438 DTCANGTKGE KGDKGDRGAV GAPGLNGEPG AK------GD KGEMGDKGYC 251 300 ENSP00000330808/1-477 GDSGERGGKG QKGEGGMKGE KGSKGDSGME GKSGRNGLPG AKGDPGIKGE ENSBTAP00000024606/1-473 GDSRERGEKG EKGEEGMKGE KGSKGDNGME GKSGSDGLPG VPGDPGVKGE ENSTTRP00000011345/1-474 GDSGERGGKG EKGEEGMKGE KGSKGDIGME GKSGSDGLPG PQGDPGVKGE bmy_18989T0/1-477 GDSGERGGKG EKGEEGMKGE KGSKGDIGTE GKSGSEGLPG AQGDPGVKGE BACU012277/1-438 GDSGERGGKG EKGEEGMKGE KGSKGDIGTE GKSGSDGLPG AQGDPGVKGE 301 350 ENSP00000330808/1-477 KGELGPPGLL GPTGPKGDIG NKGVRGPTGK KGSRGFKGSK GELARVPRSA ENSBTAP00000024606/1-473 KGELGIPGLM GPVGPKGELG SKGVRGSIGK KGSRGLKGSK GEQARVPRSA ENSTTRP00000011345/1-474 KGELGPPGLV GPAGPKGELG SKGVRGSIGK KGSRGLKGSK GEVARVPQSA bmy_18989T0/1-477 KGELGPPGLV GPAGPKGELG SKGVRGSIGK KGSRGLKGSK GEVARVPRSA BACU012277/1-438 KGELGPPGLV GPAGPKGELG SKGVRGSIGK KGSRGLKGSK GEVARVPRSA 351 400 ENSP00000330808/1-477 FSAGLSKPFP PPNIPIKFEK ILYNDQGNYS PVTGKFNCSI PGTYVFSYHI ENSBTAP00000024606/1-473 FSAALSKPFP PPNAPIKFDK VLYNDQGNYS PVTGKFNCSI PGAYVFSYHI ENSTTRP00000011345/1-474 FSAALSKPFP PPNAPIKFDK VLYNDQGNYS PVTGKFNCSI PGAYVFSYHV bmy_18989T0/1-477 FSAALSKPFP PPNAPIKFDK VLYNDQGNYS PVTGKFNCSI PGAYVFSYHV BACU012277/1-438 FSAALSKPFP PPNAPIKFDK VHYNDQGNYS PVTGKFNCSI PGAYVFSYHV 401 450 ENSP00000330808/1-477 TVRGRPARIS LVAQNKKQFK SRETLYGQEI DQASLLVILK LSAGDQVWLE ENSBTAP00000024606/1-473 TVRGRPARIS LVAWNRKQFK SRETLYGHEI DQTSLLVILK LRAGDQVWLE ENSTTRP00000011345/1-474 TVRGRPAQIS LVAWNRKQFK SRETLYGHEI DQASLLIILK LKAGDQVWLE bmy_18989T0/1-477 TVRGRPAQIS LVAWNRKQFK SRETLYGHEI DQASLLIILK LKAGDQVWLE BACU012277/1-438 TVRGRPAQIS LVSWNRKQFK SRETLYGHEI DQASLLIILK LKAGDQVWLE 451 500 ENSP00000330808/1-477 VSKDWNGVYV SAEDDSIFTG FLLYPEETSG ISP ENSBTAP00000024606/1-473 VSKDWNGVYV SAEDDSIFTG FLLYPDENPS ISP ENSTTRP00000011345/1-474 VSKDWNGVYV SAEDDSIFTG FLLYPEENPG VSP bmy_18989T0/1-477 VSKDWNGVYV SAEDDSIFTG FLLYPEENPG ISP BACU012277/1-438 VSKDWNGVYV SAEDDSIFTG FLLYPEENPG ISP