KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:41 2014 Check: 00 .. Name: ENSP00000305675/1-425 Len: 576 Check: 645 Weight: 1.00 Name: ENSBTAP00000024617/1-465 Len: 576 Check: 9553 Weight: 1.00 Name: ENSTTRP00000003252/1-425 Len: 576 Check: 9490 Weight: 1.00 Name: bmy_07390T0/1-574 Len: 576 Check: 2301 Weight: 1.00 Name: BACU003730/1-425 Len: 576 Check: 6693 Weight: 1.00 // 1 50 ENSP00000305675/1-425 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024617/1-465 ---------- ---------- ---------- ---------- -TSASPRERC ENSTTRP00000003252/1-425 ---------- ---------- ---------- ---------- ---------- bmy_07390T0/1-574 MPLNPEWFSV LSPSPPTGWR RSFKSSWNAA PLISVASCCL SEPLPVLESG BACU003730/1-425 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000305675/1-425 ---------- ---------- ---------- -MGEDAAQAE KFQHPGSDMR ENSBTAP00000024617/1-465 SELKPEGEAR HPLTTSPSHR GQRKVPICAA AIGEDAVQAE KFQHPGPNMQ ENSTTRP00000003252/1-425 ---------- ---------- ---------- -MGEDAAQAE KFQHPGPDMR bmy_07390T0/1-574 ALSSNQRATL CTPLHRPSRR SQKKVPTCPA -MGEDAAQAE KFQHPGPDMR BACU003730/1-425 ---------- ---------- ---------- -MGEDAAQAE KFQHPGPDIR 101 150 ENSP00000305675/1-425 QEKPSSPSPM PSSTPSPSLN LGNTEEAIRD NSQVNAVTVL TLLDKLVNML ENSBTAP00000024617/1-465 PEKAASSSPV PSSTPSPSLH LGSTEEAIRD NSQVNAVTVL TLLDKLVNML ENSTTRP00000003252/1-425 QEKPGSSSPV PSSTPSPSLN PGSTEEAIRD NSQVNAVTVL TLLDKLVNML bmy_07390T0/1-574 QEKPGSSSPA PSSTPSPSLN PGSTEEAIRD NAQVNAVTVL TLLDKLVNML BACU003730/1-425 QEKPGSSSPA PSSTPSPSLN PGSTEEAIRD NAQVNAVTVL TLLDKLVNML 151 200 ENSP00000305675/1-425 DAVQENQHKM EQRQISLEGS VKGIQNDLTK LSKYQASTSN TVSKLLEKSR ENSBTAP00000024617/1-465 DAVQENQHKM EQRQISLEGS VKGIQNDLTK LSKYQASTSN TVSKLLEKSR ENSTTRP00000003252/1-425 DAVQENQHKM EQRQISLEGS VKGIQNDLTK LSKYQASTSN TVSKLLEKSR bmy_07390T0/1-574 DTVQENQHKM ELRQMSLEGS VKGIQNDLTK LSKYQASTSN TVSKLLERSR BACU003730/1-425 DAVQENQHKM EQRQMSLEGS VKGIQNDLTK LSKYQASTSN TVSKLLEKSR 201 250 ENSP00000305675/1-425 KVSAHTRAVK ERMDRQCAQV KRLENNHAQL LRRNHFKVLI FQ-------- ENSBTAP00000024617/1-465 KVSAHTRAVK ERMERQSAQV KRLENNHAQL LRRNHFKVLI FQ-------- ENSTTRP00000003252/1-425 KVSAHTRAVR ERLERQCAQV KRLENNHAQL LRRNHFKVLI FQ-------- bmy_07390T0/1-574 KVSAHTRAVK ERLERQCAQV KRLETNHAQL LRRNHFKVLI FQTGNFLAFN BACU003730/1-425 KVSAHMRAVK ERLERQCAQV KRLETNHAQL LRRNHFKVLI FQ-------- 251 300 ENSP00000305675/1-425 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024617/1-465 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003252/1-425 ---------- ---------- ---------- ---------- ---------- bmy_07390T0/1-574 ANGIAFHEPD ELKRDMTWAA AEALPWSPVL SHWIDRCEIT ARNGRNSPYS BACU003730/1-425 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000305675/1-425 ---------- -EENEIPASV FVKQPVSGAV EGKE-ELPDE NKSLEETLHT ENSBTAP00000024617/1-465 ---------- -EENEIPASV FAKEPVSSPG EEKEGEHADE NKSLEETLHT ENSTTRP00000003252/1-425 ---------- -EENEIPASV FVKEPASSLA EGKEEEHADE NKSLEETLHT bmy_07390T0/1-574 EDKVKQGLKT KEENEIPASV FVKEPASSLA EGKEEEHADE NKSLEETLHT BACU003730/1-425 ---------- -EENEIPASV FVKEPASSLA EGKEEEHADE NKSLEETLHT 351 400 ENSP00000305675/1-425 VDLSSDDDLP HDEEALEDSA EEKVEESRAE KIKRSSLKKV DSLKKAFSRQ ENSBTAP00000024617/1-465 VDLSSDDELP HDEEALEDSA EEKMEESRAE RIKRSSLRKV DSLKKAFSRQ ENSTTRP00000003252/1-425 VDLSSDDELP HDEEALEDSA EEKMEESRAE KIKRSSLRKV DSLKKAFSRQ bmy_07390T0/1-574 VDLSSDDELP HDEEALEDSA EEKMEESRAE KIKRSSLRKV DSLKKAFSRQ BACU003730/1-425 VDLSSDDELP HDEEALEDSA EEKMEESRAE KIKRSSLRKV DSLKKAFSRQ 401 450 ENSP00000305675/1-425 NIEKKMNKLG TKIVSVERRE KIKKSLTSNH QKISSGKSSP FKVSPLTFGR ENSBTAP00000024617/1-465 NIEKKMNKLG TKIVSVERRE KIKKSLTSNH QKISSGKSSP FKVSPLTFGR ENSTTRP00000003252/1-425 NIEKKMNKLG TKIVSAERRE KIKKSLTSNH QKTSSGKSSP FKVSPLTFGR bmy_07390T0/1-574 NIEKKMNKLG TKIVSAERRE KIKKSLTSNH QKTSSGKSSP FKVSPLTFGR BACU003730/1-425 NIEKKMNKLG TKIVSAERRE KIKKSLTSNH QKTSSGKSSP FKVSPLTFGR 451 500 ENSP00000305675/1-425 KKVREGESHA ENETKSEDLP SSEQMPNDQE EESFAEGHSE ASLASALVEG ENSBTAP00000024617/1-465 KKVREGESPA ENETKSEDMP SSE-MANDYE ESSFAEGLSE ASLTSALVEG ENSTTRP00000003252/1-425 KKVREGESPA ENETKSEDMP SSE-VPNDHE ESSFAERLSE ASLTSVLVEG bmy_07390T0/1-574 KKVREGENPA ENETKSEDMP SSE-VPNDQE ESSFAEGLSE ASLTSVLVEG BACU003730/1-425 KKVREGESPA ENETKSEDMP SSE-VPNDHE ESSFAEGLSE ASLTSVLVEG 501 550 ENSP00000305675/1-425 EIAEEAAEKA TSRGSNSGMD SNIDLTIVED EEEESVALEQ AQKVRYEGSY ENSBTAP00000024617/1-465 KSMEGDAGTA TSRGSDSAMD SNVDLTIVED EEEESVVLEQ AQQVRYAGDY ENSTTRP00000003252/1-425 KSMEGDAGRA ASRGSDSAMD SNIDLTIVED EEEESVALEQ AQQVCYDGSY bmy_07390T0/1-574 KSTEGDAGRV ASRGSDSAMD SNIDLTIVED EEEESVALEQ AQQVCYDGGY BACU003730/1-425 KSTEGDAGRA ASRGSDSAMD SNIDLTIVED EEEESVALEQ AQQVCYDGGY 551 600 ENSP00000305675/1-425 ALTSEEAERS DGDPVQPAVL QVHQTS ENSBTAP00000024617/1-465 VLASHEAERS EEEPVQPAVL QVDQTA ENSTTRP00000003252/1-425 VLTSHEAERS DKEPVQPAVL QVDQTA bmy_07390T0/1-574 VLTSHEAERS DEEPVQPAVL QVDQTA BACU003730/1-425 VLTSHEAERS DEEPVQPAVL QVDQTA