KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:46 2014 Check: 00 .. Name: ENSTTRP00000008331/1-393 Len: 452 Check: 2572 Weight: 1.00 Name: ENSP00000356170/1-386 Len: 452 Check: 5939 Weight: 1.00 Name: ENSBTAP00000024637/1-301 Len: 452 Check: 2494 Weight: 1.00 Name: bmy_11870T0/1-425 Len: 452 Check: 7783 Weight: 1.00 Name: BACU001096/1-358 Len: 452 Check: 7525 Weight: 1.00 // 1 50 ENSTTRP00000008331/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000356170/1-386 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024637/1-301 ---------- ---------- ---------- ---------- ---------- bmy_11870T0/1-425 MAIYIKHKIK LNVTLAAFQL MDSHMWLVAT ALDRTDIGHV HHRRSSTGQS BACU001096/1-358 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008331/1-393 --MAVPPSAP LPCSPFYLRR QAPCPQCSWG MEEKAAAGAG CREPPGPPRA ENSP00000356170/1-386 --MAVPPSAP QPRASFHLRR HTPCPQCSWG MEEKAAASAS CREPPGPPRA ENSBTAP00000024637/1-301 ---------- ---------- ---------- ---------- ---------- bmy_11870T0/1-425 WILDSNQDRR LVVERFLNRR QAPCPQCSWG MEEKAAAGAG CREPPGPPRA BACU001096/1-358 ---------- ---------- ---------- MEEKAAAGAG CREPPGPPRA 101 150 ENSTTRP00000008331/1-393 AAVPCFGISV DQDDILPGAL RLIRELRPHW KPQQVRTKRF TDGITNKLVA ENSP00000356170/1-386 AAVAYFGISV DPDDILPGAL RLIQELRPHW KPEQVRTKRF TDGITNKLVA ENSBTAP00000024637/1-301 ---------- ---------- ---------- -------QRF TDGITNKLVA bmy_11870T0/1-425 AAVPCFGISV DQDDILPGAL RLIRELRPHW KPQQVRTKRF TDGITNKLVA BACU001096/1-358 AAVPCFGISV DQDDILPGAL RLIRELRPHW KPQQVRTKRF TDGITNKLVA 151 200 ENSTTRP00000008331/1-393 CYVEEDMQDC VLVRVYGERT ELLVDRENEV RNFQLLRAHG CAPKLYCTFQ ENSP00000356170/1-386 CYVEEDMQDC VLVRVYGERT ELLVDRENEV RNFQLLRAHS CAPKLYCTFQ ENSBTAP00000024637/1-301 CYVEEDMRDC VLVRVYGERT ELLVDRESEV RNFQLLRAHG CAPKLYCTFQ bmy_11870T0/1-425 CYVEEDMRDC VLVRVYGERT ELLVDRESEV RNFQLLRAHG CAPKLYCTFQ BACU001096/1-358 CYVEEDMRDC VLVRVYGERT ELLVDRESEV RNFQLLRAHG CAPKLYCTFQ 201 250 ENSTTRP00000008331/1-393 NGLCYEYMRG MALGPEHIRE PRLFRLIALE MAKIHTIHAN GSLPKPILWH ENSP00000356170/1-386 NGLCYEYMQG VALEPEHIRE PRLFRLIALE MAKIHTIHAN GSLPKPILWH ENSBTAP00000024637/1-301 NGLCYEYMRG VALGPEHIRE PRLFRLIALE MAKIHTIHAN GSLPKPTLWH bmy_11870T0/1-425 NGLCYEYMRG MALGPEHIRE PRLFRLIALE MAKIHTIHAN GSLPKPILWH BACU001096/1-358 NGLCYEYMRG MALGPEHIRE PRLFRLIALE MAKIHTIHAN GSLPKPILWH 251 300 ENSTTRP00000008331/1-393 KMHNYFTLVK NEINPSLSAD VPKVEVLERE LAWLKEHLPQ LDSPVVFCHN ENSP00000356170/1-386 KMHNYFTLVK NEINPSLSAD VPKVEVLERE LAWLKEHLSQ LESPVVFCHN ENSBTAP00000024637/1-301 KIHNYFALVK NEINPSLSAD VPEVGVLERE LVWLKEHLPP LDSPVVFCHN bmy_11870T0/1-425 KMHNYFTLVK NEINPRY--- --------KD LRGFKA--TT LDSPVVFCHN BACU001096/1-358 KMHNYFTLVK NEINPSLSAD VPEVEVLERE LAWLKEHLPQ LDSPVVFCHN 301 350 ENSTTRP00000008331/1-393 DLLCKNIIYD STKGHVRFID YEYAGYNYQA FDIGNHFNEF AGVNEVDYCW ENSP00000356170/1-386 DLLCKNIIYD SIKGHVRFID YEYAGYNYQA FDIGNHFNEF AGVNEVDYCL ENSBTAP00000024637/1-301 DLLCKNIIYD SSKGHVRFID YEYAGYNYQA FDIGNHFNEF AGVNEVDYSR bmy_11870T0/1-425 DLLCKNIIYD STKGHVRFID YEYAGYNYQA FDIGNHFNEF AGVNEVDYCR BACU001096/1-358 DLLCKNIIYD STKGHVRFID YEYAGYNYQA FDIGNHFNEF AGVNEVDYCR 351 400 ENSTTRP00000008331/1-393 YPARETQLQW LRYYLQAQKG MAVTPREVER LYVQVNKFAL RLSSVSSTVP ENSP00000356170/1-386 YPARETQLQW LHYYLQAQKG MAVTPREVQR LYVQVNKFAL -----ASHFF ENSBTAP00000024637/1-301 YPARETQLLW LRYYLQAQNG TAVTPREVER LYVQVNKFAL -----ASHFL bmy_11870T0/1-425 YPARETQLQW LRYYLQAQKG MAVTPREVER LYVQVNKFAL -----ASHFF BACU001096/1-358 YPARETQLQW LRYYLQAQKG MAVTPREVER LYVQVNKFAL -----ASHFF 401 450 ENSTTRP00000008331/1-393 VSLQLGVHDR FGGLT----- -TLI-FSDVF SGVSLLLGTL GPHPEPVLHH ENSP00000356170/1-386 WALWALIQNQ YSTIDFDFLR YAVIRFNQYF K--------V KPQASALEMP ENSBTAP00000024637/1-301 WALWALIQNQ FSTIDFDFLR YAVIRFNQYF K--------V KPQVAALEMP bmy_11870T0/1-425 WALWALIQSQ FSTIDFNFLR YAVIRFNQYF K--------V KPQVSALEMP BACU001096/1-358 WALWALIQSQ FSTIDFNFLR YAVIRFNQYF K--------V KPQVSALEMP 451 500 ENSTTRP00000008331/1-393 RL ENSP00000356170/1-386 K- ENSBTAP00000024637/1-301 K- bmy_11870T0/1-425 K- BACU001096/1-358 K-