KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:23:48 2014  Check: 00 ..

 Name: bmy_06692T0/1-137         Len:    228  Check:  8168  Weight:  1.00
 Name: ENSP00000473381/1-228     Len:    228  Check:  492  Weight:  1.00
 Name: ENSTTRP00000002919/1-226  Len:    228  Check:  4145  Weight:  1.00
 Name: ENSBTAP00000024656/1-226  Len:    228  Check:  4944  Weight:  1.00

//


                          1                                                   50
bmy_06692T0/1-137         -----LGLPL GLAGARGPVS GGGASPPVLL TSAFPPV--- -----PGCPS 
ENSP00000473381/1-228     MVKSSLQRIL NSHCFAREKE GDKPSATIHA SRTMPLLSLH SRGGSSSESS 
ENSTTRP00000002919/1-226  MVKSSLQRIL NSHCFAREKE GDKPSATVHA TRTMPLLSLH SRGDRSSESS 
ENSBTAP00000024656/1-226  MVKSSLQRIL NSHCFAREKE GDKPSATVHA TRTMPLLSLH SRGGRSSESS 


                          51                                                 100
bmy_06692T0/1-137         TAVVTWVQGL GGAP----DV PHPPLKIPGG RGNSQRDHNL SANLFYSDNR 
ENSP00000473381/1-228     RVSLHCCSNP GPGPRWCSDA PHPPLKIPGG RGNSQRDHNL SANLFYSDDR 
ENSTTRP00000002919/1-226  RASINCCSNL GPGPRWC-DV SHPPLKIPGG RGNSQRDHSL SANLFYSDNR 
ENSBTAP00000024656/1-226  RVSINCCSNL GPGPRWC-DV PHPPLKIPGG RGNSQRDHNL SANLFYSDNR 


                          101                                                150
bmy_06692T0/1-137         LNVTEELTSN NKTRIFNVQS RLTDAKHINW RAVLSNSCLY VEIPGGALPE 
ENSP00000473381/1-228     LNVTEELTSN DKTRILNVQS RLTDAKRINW RTVLSGGSLY IEIPGGALPE 
ENSTTRP00000002919/1-226  LNVTEVLTSN NKTRIFNVQS RLTDAKHINW RAVLSNSCLY VEIPGGALPE 
ENSBTAP00000024656/1-226  LNVTEELTSN NKTRIFNVQS RLTEAKHINW RAVLSNTCLY VEIPGGALPE 


                          151                                                200
bmy_06692T0/1-137         GSKD------ ---------- ---------- ---------- ---------- 
ENSP00000473381/1-228     GSKDSFAVLL EFAEEQLRAD HVFICFHKNR EDRAALLRTF SFLGFEIVRP 
ENSTTRP00000002919/1-226  GSKDSFAVLL EFAEEQLRAD HVFVCLHKNR DDRAALLRTF SFLGFEIVRP 
ENSBTAP00000024656/1-226  GSKDSFAVLL EFAEEQLHVD HVFICFHKNR DDRAALLRTF SFLGFEIVRP 


                          201                                                250
bmy_06692T0/1-137         ---------- ---------- -------- 
ENSP00000473381/1-228     GHPLVPKRPD ACFMAYTFER ESSGEEEE 
ENSTTRP00000002919/1-226  GHPLVPKRPD ACFMAYTFER ESSGEEE- 
ENSBTAP00000024656/1-226  GHPLVPKRPD ACFMAYTFER ESSGEEE-