KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:48 2014 Check: 00 .. Name: ENSP00000349596/1-465 Len: 465 Check: 4648 Weight: 1.00 Name: ENSBTAP00000024658/1-460 Len: 465 Check: 8989 Weight: 1.00 Name: bmy_12197T0/1-351 Len: 465 Check: 2741 Weight: 1.00 Name: BACU006897/1-461 Len: 465 Check: 9575 Weight: 1.00 Name: ENSTTRP00000015860/1-461 Len: 465 Check: 1536 Weight: 1.00 // 1 50 ENSP00000349596/1-465 MASTTSTKKM MEEATCSICL SLMTNPVSIN CGHSYCHLCI TDFFKNPSQK ENSBTAP00000024658/1-460 ----MASKKM REEATCSICL HLMTNAVSIS CGHSYCHVCI VSFFENLNRM bmy_12197T0/1-351 MASTPITKKM REEATCSICL QLMTEPVSIN CGHSYCHWCI MSFCE----M BACU006897/1-461 MASTPITKKM REEATCSICL QLMTEPMSIS CGHSYCHWCI MSFCE----M ENSTTRP00000015860/1-461 MASTPITKKM REEATCSICL QLITEPVSIS CGHSYCHLCI VSFCE----M 51 100 ENSP00000349596/1-465 QLRQETFCCP QCRAPFHMDS LRPNKQLGSL IEALKETDQE MSCEEHGEQF ENSBTAP00000024658/1-460 TPGLKTFSCP QCRAPFTMAS LRPNKQLGNL IEVIKEMDQE MSCEEHGEKL bmy_12197T0/1-351 QPWLGLFSCP QCRVPFKMAS LRPNKQLGNL IEAIKEMDQE MLCEEHGEKL BACU006897/1-461 QPWLELFSCP QCRVPFKMAS LRPNKQLGNL IEAIKEVDQE MSCEEHGEKL ENSTTRP00000015860/1-461 QPWLDMFSCP QCRMPFKMAS LRPNRQLGNL IEAIKEMDQE MSCEEHGEKL 101 150 ENSP00000349596/1-465 HLFCEDEGQL ICWRCERAPQ HKGHTTALVE DVCQGYKEKL QKAVTKLKQL ENSBTAP00000024658/1-460 HLFCEDEGQL ICWLCDRGAQ HKGHATALVE EACQGYKEKL QQAVTKLRQL bmy_12197T0/1-351 HLFCEDEGQL ICWRCDRGLQ HKGHTTALVE DACQGYKEKL QEAVTKLRQL BACU006897/1-461 HLFCEDEGQL ICWRCDRGLQ HKGHTTALVE DACQGYKEKL QEAVTKLRQL ENSTTRP00000015860/1-461 HLFCEDEGQL ICWRCDRGLQ HKGHTTALVE DACQGYKEKL QEAVTKLRQL 151 200 ENSP00000349596/1-465 EDRCTEQKLS TAMRITKWKE KVQIQRQKIR SDFKNLQCFL HEEEKSYLWR ENSBTAP00000024658/1-460 EEECMNLKVF TAEQITKWNE KIEFQKQKIQ SDFKTLQRFL HEEEKSYLWK bmy_12197T0/1-351 EEECMNLKVF TAKQITEWNS ---------- --------FL HEEEKSYLWK BACU006897/1-461 EEECMNLKVF TAKQITEWNE KTEVQKQKIQ SDFKNLQSFL HEEEKSYLWK ENSTTRP00000015860/1-461 EEECMNLKVF TAKQITEWNE KIEVQKQKIQ SDFKNLQSFL HEEEKSYLWK 201 250 ENSP00000349596/1-465 LEKEEQQTLS RLRDYEAGLG LKSNELKSHI LELEEKCQGS AQKLLQNVND ENSBTAP00000024658/1-460 LEKEKEQTLR RLRDNEANLE QKNHELQSHI LELENKCQGS AQKLLQDVKD bmy_12197T0/1-351 LEKEKEQTLR RLRDNEATLE QKSHELESYI LELEHKCQGS AQNLLQDVKD BACU006897/1-461 LEKEKEQTLR RLRDNEAKLE QKSHELECYI LELEHKCQGS AQNLLQDVKD ENSTTRP00000015860/1-461 LEKEKEQTLR RLRDNEANLE QKSHELESYI LQLEHKCQGS AQNLLQDVKD 251 300 ENSP00000349596/1-465 TLSRSWAVKL ETSEAVSLEL HTMCNVSKLY FDVKKMLRSH QVSVTLDPDT ENSBTAP00000024658/1-460 TLSRSWAVKL EQPEALSLDL HTVCNVSELY FDVKKMLRRH QVSVTLDPET bmy_12197T0/1-351 TLSRSWAVKL EQPEALSLDL HTVCNVSELY FDVKKVLRSY QVSVTLDPDT BACU006897/1-461 TLSRSWAVKL EQPEALSLDL HTVCNVSELY FDVKKVLRSY QVSVTLDPDT ENSTTRP00000015860/1-461 TLSRSWAVKL EQPEAPSLDL HTVCNVSELY FDVKKVLRSY QVSVTLDPDT 301 350 ENSP00000349596/1-465 AHHELILSED RRQVTRGYTQ ENQDTSSRRF TAFPCVLGCE GFTSGRRYFE ENSBTAP00000024658/1-460 AHYELILSED RRQVIRGCPQ ENLDNSSRRF SALPCILGYE GFTSGKHYFE bmy_12197T0/1-351 AYYELILSED RRQVTRGCPQ ENLDTSSRRF SALPCILGCE SFTSGKHYFE BACU006897/1-461 AYYELILSED RRQVTRGCPQ ENLNISSRRF SALPCILGCE GFTSGKHYFE ENSTTRP00000015860/1-461 AYYELILSED RRQVTRGCPQ ENLDTSSRRF SALPCILGCE GFTSGKHYFE 351 400 ENSP00000349596/1-465 VDVGEGTGWD LGVCMENVQR GTGMKQEPQS GFWTLRLCKK KGYVALTSPP ENSBTAP00000024658/1-460 VDVGEGTGWD LGVCMENVQR DTVMPQTPQS GFWAIRRCKE -GYVALTSPL bmy_12197T0/1-351 VFSEDGTGF- ---------- ---------- ---------- ---------- BACU006897/1-461 VDVGEGTGWD LGVCMENVQR DTVMVQTPQS GFWAIRLCKK KGYVALTSPL ENSTTRP00000015860/1-461 VDVGEGTGWD LGVCMETVQR DTVMVQTPQS GFWAIRLCKK NGYVALTSPL 401 450 ENSP00000349596/1-465 TSLHLHEQPL LVGIFLDYEA GVVSFYNGNT GCHIFTFPKA SFSDTLRPYF ENSBTAP00000024658/1-460 TSIHLTEKPL VVGIFLDFEA GVVSFYNMTT GSHIFTFPKA SFSDTLRPYF bmy_12197T0/1-351 ---------- ---------- --FPFFNLDA T--------- ---------- BACU006897/1-461 TSLQLREQPL VVGIFLDFEA GVVSFYNMTT GSHIFTFPKA SFFDTLRPYF ENSTTRP00000015860/1-461 TSLHLREQPL VVGIFLDFEA GVVSFYNMTT GSHIFTFPKA SFSDTLRPYF 451 500 ENSP00000349596/1-465 QVYQYSPLFL PPPGD ENSBTAP00000024658/1-460 QVYLYSPLFL PPPDE bmy_12197T0/1-351 ------PEFL F---- BACU006897/1-461 QVYQYSPLFL PPPDE ENSTTRP00000015860/1-461 QVYQYSPLFL PPPDE