KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:50 2014 Check: 00 .. Name: ENSTTRP00000010218/1-825 Len: 827 Check: 8407 Weight: 1.00 Name: ENSP00000248444/1-827 Len: 827 Check: 5924 Weight: 1.00 Name: ENSBTAP00000024683/1-827 Len: 827 Check: 5285 Weight: 1.00 Name: bmy_03171T0/1-567 Len: 827 Check: 3649 Weight: 1.00 Name: BACU012703/1-827 Len: 827 Check: 795 Weight: 1.00 // 1 50 ENSTTRP00000010218/1-825 MTKLSTQVKG SLNVTTPGVQ IWRIEAMQMV PVPSSTFGSF FEGDCYIVLA ENSP00000248444/1-827 MTKLSAQVKG SLNITTPGLQ IWRIEAMQMV PVPSSTFGSF FDGDCYIILA ENSBTAP00000024683/1-827 MTKLSAQVKG SLNITTPGVQ IWRIEAMQMV PVPSNSFGSF FDGDCYVILA bmy_03171T0/1-567 ---------- ---------- ---MPAMQMV PVPSSTFGSF FNGDCYIVLA BACU012703/1-827 MTKLSAQVKG SLNITAPGVQ IWRIEAMQMV PVPSSTFGSF FDGDCYVVLA 51 100 ENSTTRP00000010218/1-825 IHKTGSNLSY DIHYWIGRDS SQDEQGAAAI YTTQMDDFLK GRAVQHREVQ ENSP00000248444/1-827 IHKTASSLSY DIHYWIGQDS SLDEQGAAAI YTTQMDDFLK GRAVQHREVQ ENSBTAP00000024683/1-827 IHKTGSNLSY DIHYWIGQAS SQDEQGAAAI YTTQMDDFLK GRAVQHREVQ bmy_03171T0/1-567 IHKTGSNLSY DIHYWIGQDS SQDEQGAAAI YTTQMDDFLK GRAVQHREVQ BACU012703/1-827 IHKTGSNLSY DIHYWIGQDS SQDEQGAAAI YTTQMDDFLK GRAVQHREVQ 101 150 ENSTTRP00000010218/1-825 GNESETFRGY FKQGIVIRKG GVASGMKQVE TNSYDIQRLL HVKGKRNVVA ENSP00000248444/1-827 GNESEAFRGY FKQGLVIRKG GVASGMKHVE TNSYDVQRLL HVKGKRNVVA ENSBTAP00000024683/1-827 GNESDTFRGY FKKGIVIRKG GVASGMKQVE TNSYDIQRLL HVKGKRNVVA bmy_03171T0/1-567 GNESETFRGY FKQGIVIRKG GVASGMKQVE TNSYDIQRLL HVKGKRNVVA BACU012703/1-827 GNESETFRGY FKQGIVIRKG GVASGMKQVE TNSYDIQRLL HVKGKRNVVA 151 200 ENSTTRP00000010218/1-825 REVEMSWKSF NRGDVFLLDL GKLIIQWNGP ESNRMERLRG MTLAKEIRDQ ENSP00000248444/1-827 GEVEMSWKSF NRGDVFLLDL GKLIIQWNGP ESTRMERLRG MTLAKEIRDQ ENSBTAP00000024683/1-827 GEVEMSWKSF NRGDVFLLDL GKLIIQWNGP ESNHMERLRG MNLAKEIRDQ bmy_03171T0/1-567 GE-------- ---------- ---------- ---------- ---------- BACU012703/1-827 GEVNMSWKSF NRGDVFLLDL GKLIIQWNGP ESNRMERLRG MTLAKEIRDQ 201 250 ENSTTRP00000010218/1-825 ERGGRTYVGI VDGEDEKASP QLMEIMNHVL GQRKELKAAM PDTVVEPALK ENSP00000248444/1-827 ERGGRTYVGV VDGENELASP KLMEVMNHVL GKRRELKAAV PDTVVEPALK ENSBTAP00000024683/1-827 ERGGRTYVGV VDGEDEKASP QLMEIMNHVL GQRKELKAAV ADTVVEPALK bmy_03171T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU012703/1-827 ERGGRTYVGV VDGENEKASP QLMEIMNHVL GQRTVLKAAV PDTVVEPALK 251 300 ENSTTRP00000010218/1-825 AALKLYHVSD SGGNVVVREV ATWPLTQDLL SHEDCYILDQ GGLKVYVWKG ENSP00000248444/1-827 AALKLYHVSD SEGNLVVREV ATRPLTQDLL SHEDCYILDQ GGLKIYVWKG ENSBTAP00000024683/1-827 AALKLYHVSD SEGKVVVREI ATQPLTQDLL SHEDCYILDQ GGLKIYVWKG bmy_03171T0/1-567 ---------- ---------- ---------- ---------- ---------- BACU012703/1-827 AALKLYHVSD SGGNVVVREV ATRPLTQDLL SHEDCYILDQ GGLKIYVWKG 301 350 ENSTTRP00000010218/1-825 KNANAQQKRE AMSQALXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000248444/1-827 KKANEQEKKG AMSHALNFIK AKQYPPSTQV EVQNDGAESA VFQQLFQKWT ENSBTAP00000024683/1-827 KNANAQEKKE AMNQALNFIK AKQYPPSTQV ELQNDGAESA VFQQLFQKWT bmy_03171T0/1-567 ---------- ---------- ---------- ---------- ---QLFQKWT BACU012703/1-827 KNVNAQEKKE AMSQALNFIK AKQYPPSTQV EVQNDGAESA VFQQLFQKWT 351 400 ENSTTRP00000010218/1-825 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000248444/1-827 ASNRTSGLGK THTVGSVAKV EQVKFDATSM HVKPQVAAQQ KMVDDGSGEV ENSBTAP00000024683/1-827 VPNRTTGLGK THTVGSVAKV EQVKFDAMSM HVQPQVAAQQ KMVDDGSGEV bmy_03171T0/1-567 VPNRTSGLGK THAVGSVARV EQVKFDATSM HVQPQAAAQQ KMVDDGSGEV BACU012703/1-827 VPNRASGLGK THTVGSVARV EQVKFDATSM HVQPQVAAQQ KMVDDGSGEV 401 450 ENSTTRP00000010218/1-825 XXXXXXXXEL VPVDSKWLGH FYGGDCYVLL YT-LIGEKKH YVLYIWQGSQ ENSP00000248444/1-827 QVWRIENLEL VPVDSKWLGH FYGGDCYLLL YTYLIGEKQH YLLYVWQGSQ ENSBTAP00000024683/1-827 QMWRIENLEL VPVNTKWLGH FFGGDCYLLL YTYFINEKPH YLLYIWQGSQ bmy_03171T0/1-567 ---------- ---------- ---------- ---------- ------QGSQ BACU012703/1-827 QVWRIEDLEL VPVDSKWLGH FYGGDCYLLL YTYLIGEKKY YLLYIWQGSQ 451 500 ENSTTRP00000010218/1-825 ASQDEITASA YQAVILDQQY NNEPVQILVP MGKESPHLMS IFKGRMVVYQ ENSP00000248444/1-827 ASQDEITASA YQAVILDQKY NGEPVQIRVP MGKEPPHLMS IFKGRMVVYQ ENSBTAP00000024683/1-827 ASQDEITASA YQAVILDQEY NNEPVQIRVP MGKEPPHLMS IFKGCMVVYQ bmy_03171T0/1-567 ASRDEITASA YQAVILDQQY NNEPVQILVP MGKEPPHLMS IFKGRMVVYQ BACU012703/1-827 ASRDEITASA YQAVILDQQY NNEPVQILVP MGKEPPHLMS IFKGRMVVYQ 501 550 ENSTTRP00000010218/1-825 GGTSRASSVE PVPSTQLFQV RGASTNNTKA FEVPARAASL NSNDVFILKT ENSP00000248444/1-827 GGTSRTNNLE TGPSTRLFQV QGTGANNTKA FEVPARANFL NSNDVFVLKT ENSBTAP00000024683/1-827 GGTSRANSVE PVPSTRLFQV RGTSANNTKA FEVSPRAASL NSNDVFILKT bmy_03171T0/1-567 GGTSRANSVE PVPSTRLFQV RGTNTNNTKA FEVPARATSL NSNDVFILKT BACU012703/1-827 GGTSRANSVE PVPSTRLFQV RGTNTNNTKA FEVPARATSL NSNDVFILKT 551 600 ENSTTRP00000010218/1-825 QSCCYLWCGK GCSGDEREMA KMVADTISRT EKQVVVEGQE PANFWMALGG ENSP00000248444/1-827 QSCCYLWCGK GCSGDEREMA KMVADTISRT EKQVVVEGQE PANFWMALGG ENSBTAP00000024683/1-827 QSCCYLWCGK GCSGDEREMA KMVADTVSRT EKQVVVEGQE PANFWLALGG bmy_03171T0/1-567 QSCCYLWCGK GCSGDEREMA KMVADTISRT EKQVVVEGQE PANFWMALGG BACU012703/1-827 QSCCYLWCGK GCSGDEREMA KMVADTISRT EKQVVVEGQE PANFWMALGG 601 650 ENSTTRP00000010218/1-825 KAPYASTKRL -EETLVITPR LFECSNQTGR LLATEIPDFN QDDLEEDDVF ENSP00000248444/1-827 KAPYANTKRL QEENLVITPR LFECSNKTGR FLATEIPDFN QDDLEEDDVF ENSBTAP00000024683/1-827 KAPYASTKRL QEENLVITPR LFECSNQTGR FLATEIPDFN QDDLEEDDVF bmy_03171T0/1-567 KAPYASTKRL QEETLVITPR LFECSNQTGR FLATEIPDFN QDDLEEDDVF BACU012703/1-827 KAPYASTKRL QEETLVITPR LFECSNQTGR FLATEIPDFN QDDLEEDDVF 651 700 ENSTTRP00000010218/1-825 LLEVWDQVFF WIGKNANEAE KKAAATTVQE YLKTHPSGRD PETPIIVVKQ ENSP00000248444/1-827 LLDVWDQVFF WIGKHANEEE KKAAATTAQE YLKTHPSGRD PETPIIVVKQ ENSBTAP00000024683/1-827 LLDVWDQVFF WIGKNANEDE KKAAATTVQE YLKTHPGGRD LETPIIVVKQ bmy_03171T0/1-567 LLDVWDQVFF WIGTNANEAE KKAAATTVQE YLKTHPSGRD PETPIIVVKQ BACU012703/1-827 LLDVWDQVFF WIGTNANEAE KKAAATTVQE YLKTHPSGRD PETPIIVVKQ 701 750 ENSTTRP00000010218/1-825 GHEPPTFTGW FLAWDPFKWS NAKSYDALKA ELGNSGNWGQ ITAEITNPKL ENSP00000248444/1-827 GHEPPTFTGW FLAWDPFKWS NTKSYEDLKA ELGNSRDWSQ ITAEVTSPKV ENSBTAP00000024683/1-827 GHEPPTFTGW FLAWDPFKWN NSKSYEDLKA ELGNSGDWSQ ITAELTSSKP bmy_03171T0/1-567 GHEPPTFTGW FLAWDPFKWS NAKSYEALKA ELGNSGDWGQ IIDELTNPKL BACU012703/1-827 GHEPPTFTGW FLAWDPFKWS NAKSYEALKA ELGNSGDWGQ IIDELTNPKL 751 800 ENSTTRP00000010218/1-825 DVFNANINIS SGPLPIFPLE QLANKPVEEL PEGVDPSRRE EHLSVEDFTK ENSP00000248444/1-827 DVFNANSNLS SGPLPIFPLE QLVNKPVEEL PEGVDPSRKE EHLSIEDFTQ ENSBTAP00000024683/1-827 EAFNANSNLS SGPLPIFPLE QLVNKPTEEL PEGVDPSRRE EHLSIEDFTR bmy_03171T0/1-567 DVFNANSNIS SGPLPIFPLE QLVNKPVEEL PEGVDPSRKE EHLSVEDFTK BACU012703/1-827 DVFNANSNIS SGPLPIFPLE QLVNKPVEEL PEGVDPSRKE EHLSVEDFTK 801 850 ENSTTRP00000010218/1-825 ALGMTPAAFS ALPRWKQQNL KKEKGLF ENSP00000248444/1-827 AFGMTPAAFS ALPRWKQQNL KKEKGLF ENSBTAP00000024683/1-827 ALGMTPSAFW ALPRWKQQNL KKEKGLF bmy_03171T0/1-567 ALGMTPAAFS ALPRWKQQNL KKKKGLF BACU012703/1-827 ALGMTPAAFS ALPRWKQQNL KKKKGLF