KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:52 2014 Check: 00 .. Name: ENSP00000308976/1-222 Len: 230 Check: 1484 Weight: 1.00 Name: ENSBTAP00000024690/1-222 Len: 230 Check: 1891 Weight: 1.00 Name: bmy_12622T0/1-188 Len: 230 Check: 7900 Weight: 1.00 Name: BACU012676/1-229 Len: 230 Check: 7987 Weight: 1.00 Name: ENSTTRP00000007235/1-137 Len: 230 Check: 8271 Weight: 1.00 // 1 50 ENSP00000308976/1-222 MALHIHEACI LLLVIPGLVT SAAISHEDYP ADEGDQISSN DNLIFDDYRG ENSBTAP00000024690/1-222 MALHIHEACI LLLVIPGLVT SAAISHEDYP ADEGDQTSSN DNLIFDDYRG bmy_12622T0/1-188 MALHIHEACI LLLVIPGLVT SAAISHEDYP ADEGDQTSSN DNLIFDDYRG BACU012676/1-229 MALHIHEACI LLLVIPGLVT SAAISHEDYP ADEGDQTSSN DNLIFDDYRG ENSTTRP00000007235/1-137 MALHIHEACI LLLVIPRLVT SAAISHEDYP ADEGDQTSSN DNLIFDDYRG 51 100 ENSP00000308976/1-222 KGCVDDSGFV YKLGERFFPG HSNCPCVCAL DGPVCDQPEC PKIHPKCTKV ENSBTAP00000024690/1-222 KGCVDDSGFV YKLGERFFPG HSNCPCVCAL DGPVCDQPEC PKIHPKCTKV bmy_12622T0/1-188 KGCVDDSGFV YKLGERFFPG HSNCPCVCAL DGPVCDQPEC PKIHPKCTKV BACU012676/1-229 KGCVDDSGFV YKLGERFFPG HSNCPCVCAL DGPVCDQPEC PKIHPKCTKV ENSTTRP00000007235/1-137 KGCVDDSGFV YKLGERFFPG HSNCPCVCAL DGPVCDQPEC PKIHPKCTKV 101 150 ENSP00000308976/1-222 EHNGCCPECK EVKNFCEYHG KNYKILEEFK PSPCEWCRCE PSNEVHCVVA ENSBTAP00000024690/1-222 EHNGCCPECK EVKNFCEYHG KNYKILEEFK PSPCEWCRCE PSNEVHCVVA bmy_12622T0/1-188 EHNGCCPECK EVKNSCEYHG KNYKILEEFK AP-----YMQ NASNSHHINN BACU012676/1-229 EHNGCCPECK EVKNSCEYHG KNYKILEEFK PSPCEWCRCE PSNEVHCVVA ENSTTRP00000007235/1-137 EHNGCCPECK EVKNSCEYHG KNYKILEEFK V--------- ---------- 151 200 ENSP00000308976/1-222 DCAVPECVNP VYEPEQCCPV CKNGPNCFAG TTIIPAGIEV KVDECNICHC ENSBTAP00000024690/1-222 DCAVPECVNP VYEPEQCCPV CKNGPNCFAG TTIIPAGIEV KVDECNICHC bmy_12622T0/1-188 NATRYYCVDQ TS-------- ---------- -----SLSSD NYHECSYQVT BACU012676/1-229 DCAVPECVNP VYEPEQCCPV CKNGRQLVTN ETQTLNKHTE DEKCSGTCTY ENSTTRP00000007235/1-137 ------VTLL IY-------- ---------- ---------- ---------- 201 250 ENSP00000308976/1-222 HNG----DWW K----PAQCS KRECQGKQTV ENSBTAP00000024690/1-222 HNG----DWW K----PAQCS KRECQGKQTV bmy_12622T0/1-188 RLE----DAK V----PKNMS LMAT------ BACU012676/1-229 PLATEPLKWF VMKAYPMKGS FKACISLTS- ENSTTRP00000007235/1-137 ---------- ---------- ----------